Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.7e-207 725.7 357 100.0
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 6.3e-125 451.4 358 67.3
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 6.3e-125 451.4 358 65.6
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.2e-123 447.2 358 65.1
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 2.0e-123 446.4 358 65.6
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 4.5e-123 445.3 357 64.7
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 1.1e-121 440.7 357 64.4
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 1.1e-121 440.7 357 64.4
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 4.2e-121 438.7 359 66.9
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 8.8e-119 431.0 344 65.7
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 2.8e-117 426.0 354 61.9
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.2e-117 424.5 362 63.3
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 8.2e-117 424.5 356 63.5
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-116 423.7 373 62.2
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 4.1e-116 422.2 303 70.0
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.5e-115 420.2 360 63.6
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 2.6e-115 419.5 337 65.3
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 3.8e-114 415.6 360 63.3
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 6.5e-114 414.8 356 61.2
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 5.5e-113 411.8 355 60.0
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 7.2e-113 411.4 344 62.2
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 9.4e-113 411.0 357 60.5
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 1.6e-112 410.2 360 61.4
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 2.7e-112 409.5 358 60.9
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 2.7e-112 409.5 354 61.3
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 3.6e-112 409.1 365 61.9
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 4.7e-112 408.7 356 60.1
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 4.7e-112 408.7 354 61.6
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 7.9e-112 407.9 357 59.7
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.4e-111 407.1 348 62.1
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 1.8e-111 406.8 345 63.5
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.3e-109 400.6 354 59.9
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 1.3e-109 400.6 360 58.3
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 2.2e-109 399.8 369 59.3
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.8e-108 396.7 355 62.3
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 2.4e-108 396.4 363 59.2
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 3.5e-107 392.5 355 59.2
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 3.5e-107 392.5 361 58.2
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 5.9e-107 391.7 357 60.2
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 2.9e-106 389.4 356 59.6
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 3.8e-106 389.0 358 59.2
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.1e-105 387.5 305 64.6
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.5e-105 387.1 356 59.0
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 1.5e-105 387.1 359 58.5
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.9e-105 386.7 358 58.9
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.9e-105 386.7 370 59.5
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.9e-105 386.7 370 59.5
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 4.2e-105 385.6 359 58.5
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 5.5e-105 385.2 366 59.3
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.2e-104 384.0 292 64.7
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 6.1e-104 381.7 351 59.0
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 8.0e-104 381.3 358 59.5
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 1.4e-103 380.6 333 59.5
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.8e-103 380.2 336 60.1
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 2.3e-103 379.8 363 58.1
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 3.0e-103 379.4 358 60.3
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 1.5e-102 377.1 360 56.7
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 3.3e-102 375.9 366 58.7
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 4.4e-102 375.6 343 57.7
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.7e-101 373.6 361 56.8
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 3.7e-101 372.5 353 58.9
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 3.7e-101 372.5 359 57.9
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.1e-100 370.9 294 65.3
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 1.4e-100 370.5 369 57.5
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.8e-100 370.2 361 55.1
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 2.4e-100 369.8 360 56.9
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 2.7e-99 366.3 330 59.4
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 3.5e-99 365.9 326 61.0
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.3e-98 364.0 386 54.9
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.1e-97 360.9 289 65.1
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 1.5e-97 360.5 368 54.1
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 3.2e-97 359.4 357 55.7
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 2.1e-96 356.7 355 54.9
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.1e-96 356.7 313 59.7
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 3.6e-96 355.9 353 54.4
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 1.0e-95 354.4 200 82.5
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.4e-95 354.0 304 60.2
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.3e-95 353.2 315 58.1
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.2e-94 350.9 316 58.5
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 2.6e-94 349.7 360 54.4
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 5.7e-94 348.6 303 62.4
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 7.5e-94 348.2 316 58.2
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 7.5e-94 348.2 316 58.2
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 1.1e-92 344.4 318 58.2
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.4e-92 344.0 197 82.7
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.1e-92 342.8 339 55.8
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 7.0e-92 341.7 301 58.5
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.2e-91 340.9 352 53.4
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.5e-90 334.7 212 76.9
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.0e-87 327.8 212 75.9
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 6.8e-87 325.1 314 58.3
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 4.4e-86 322.4 342 51.5
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.4e-84 316.6 174 84.5
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 2.4e-84 316.6 306 54.2
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 1.2e-83 314.3 320 56.6
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 3.4e-78 296.2 192 75.0
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 2.9e-77 293.1 225 65.8
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 2.4e-76 290.0 279 59.5
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 4.6e-75 285.8 269 57.2
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 1.2e-70 271.2 300 50.3
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-68 264.2 180 72.2
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.4e-63 247.7 197 60.4
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 5.8e-62 242.3 192 58.9
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 1.3e-61 241.1 200 59.0
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.6e-59 232.6 236 54.7
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 1.9e-57 227.3 276 51.4
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.8e-55 220.7 202 55.4
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 2.4e-47 193.7 272 42.6
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.6e-46 188.7 165 55.2
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.1e-41 174.9 126 62.7
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.6e-40 171.0 198 42.9
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 2.8e-40 170.2 196 41.8
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 9.6e-33 145.2 84 77.4
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 9.9e-30 135.2 97 69.1
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 3.2e-28 130.2 87 75.9
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 1.2e-27 128.3 112 50.9
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 1.4e-23 114.8 60 91.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.0e-21 108.6 68 80.9
Cpa.g.sc14.61 Carica papaya HOM05D006434 ORTHO05D008069 5.1e-10 69.7 134 38.1
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 5.1e-10 69.7 137 33.6
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 1.5e-09 68.2 37 83.8
Actinidia36050 Actinidia chinensis HOM05D006434 ORTHO05D053052 3.4e-06 57.0 26 92.3


User provided reference genes

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