Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022764.1 Olea europaea HOM05D007106 ORTHO05D007770 2.2e-45 185.3 95 100.0
Dinv16657 Davidia involucrata HOM05D007106 ORTHO05D007770 6.1e-19 97.4 92 64.1
TAR374G1315 Trochodendron aralioides HOM05D007106 ORTHO05D007770 4.5e-14 81.3 92 58.7
Haze_12000 Corylus avellana HOM05D007106 ORTHO05D007770 7.7e-14 80.5 91 56.0
Nn3g17263 Nelumbo nucifera HOM05D007106 ORTHO05D007770 1.0e-13 80.1 95 54.7
Cc11_g12880 Coffea canephora HOM05D007106 ORTHO05D007770 1.6e-11 72.8 88 48.9
Hma1.2p1_1936F.1_g308220 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.6e-11 71.6 91 52.7
Hma1.2p1_2516F.1_g323695 Hydrangea macrophylla HOM05D007106 ORTHO05D007770 3.6e-11 71.6 91 52.7
CSS0012235 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 1.8e-10 69.3 87 51.7
CSS0040002 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 2.3e-10 68.9 87 51.7
TAR622G1352 Trochodendron aralioides HOM05D007106 ORTHO05D007770 2.3e-10 68.9 89 52.8
HanXRQChr17g0570821 Helianthus annuus HOM05D021717 ORTHO05D022533 1.5e-09 66.2 98 45.9
Actinidia35002 Actinidia chinensis HOM05D007106 ORTHO05D007770 4.4e-09 64.7 92 44.6
Manes.06G091700 Manihot esculenta HOM05D007106 ORTHO05D007770 5.7e-09 64.3 94 44.7
MD14G1201500 Malus domestica HOM05D007106 ORTHO05D007770 7.5e-09 63.9 90 45.6
TAR371G0193 Trochodendron aralioides HOM05D007106 ORTHO05D007770 7.5e-09 63.9 91 52.7
Actinidia19038 Actinidia chinensis HOM05D007106 ORTHO05D007770 9.8e-09 63.5 92 45.7
COL.COLO4_08636 Corchorus olitorius HOM05D007106 ORTHO05D007770 1.3e-08 63.2 90 44.4
QL10p017125 Quercus lobata HOM05D007106 ORTHO05D007770 2.2e-08 62.4 92 46.7
Actinidia37624 Actinidia chinensis HOM05D007106 ORTHO05D007770 2.8e-08 62.0 90 44.4
Peaxi162Scf01256g00221 Petunia axillaris HOM05D007106 ORTHO05D007770 2.8e-08 62.0 91 44.0
Duzib205G0867 Durio zibethinus HOM05D007106 ORTHO05D007770 3.7e-08 61.6 90 44.4
vmacro16544 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 3.7e-08 61.6 92 44.6
MSTRG.7793 Avicennia marina HOM05D042060 ORTHO05D031633 1.1e-07 60.1 92 50.0
Glyma.03G007400 Glycine max HOM05D007691 ORTHO05D008758 1.1e-07 60.1 87 40.2
Nitab4.5_0000121g0170 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.1e-07 60.1 91 42.9
Prupe.5G194500 Prunus persica HOM05D007106 ORTHO05D007770 1.1e-07 60.1 91 49.5
Aqoxy3G03422 Aquilegia oxysepala HOM05D007106 ORTHO05D007770 1.4e-07 59.7 96 47.9
Gohir.D03G093700 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.4e-07 59.7 90 45.6
Gorai.003G097700 Gossypium raimondii HOM05D007106 ORTHO05D007770 1.4e-07 59.7 90 45.6
HanXRQChr12g0380811 Helianthus annuus HOM05D021717 ORTHO05D022533 1.4e-07 59.7 98 39.8
Rhsim12G0155900 Rhododendron simsii HOM05D007106 ORTHO05D007770 1.4e-07 59.7 91 44.0
SalBow7G1857 Salvia bowleyana HOM05D007106 ORTHO05D007770 1.4e-07 59.7 93 41.9
Gohir.A03G067200 Gossypium hirsutum HOM05D007106 ORTHO05D007770 1.8e-07 59.3 90 46.7
MD06G1194400 Malus domestica HOM05D007106 ORTHO05D007770 1.8e-07 59.3 90 45.6
Lalb_Chr14g0364941 Lupinus albus HOM05D007691 ORTHO05D008758 4.1e-07 58.2 88 43.2
GSVIVG01007993001 Vitis vinifera HOM05D007106 ORTHO05D007770 4.1e-07 58.2 90 46.7
Psat4g050160 Pisum sativum HOM05D007106 ORTHO05D007770 7.0e-07 57.4 91 42.9
CSS0008414 Camellia sinensis var. sinensis HOM05D007106 ORTHO05D007770 9.2e-07 57.0 85 43.5
ClCG04G012220 Citrullus lanatus HOM05D007106 ORTHO05D007770 9.2e-07 57.0 90 42.2
ECA234G3064 Erigeron canadensis HOM05D021717 ORTHO05D022533 9.2e-07 57.0 98 43.9
CiPaw.11G045300 Carya illinoinensis HOM05D007106 ORTHO05D007770 1.2e-06 56.6 91 44.0
QL03p068707 Quercus lobata HOM05D007106 ORTHO05D007770 1.2e-06 56.6 94 45.7
Actinidia04893 Actinidia chinensis HOM05D007106 ORTHO05D007770 1.6e-06 56.2 91 44.0
CsaV3_1G005530 Cucumis sativus L. HOM05D007106 ORTHO05D007770 1.6e-06 56.2 90 43.3
Nitab4.5_0008269g0020 Nicotiana tabacum HOM05D007106 ORTHO05D007770 1.6e-06 56.2 91 40.7
PGR083G1166 Punica granatum HOM05D007106 ORTHO05D007770 1.6e-06 56.2 84 46.4
CiPaw.05G133600 Carya illinoinensis HOM05D007106 ORTHO05D007770 2.0e-06 55.8 91 45.1
MBI19_g09311_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 2.0e-06 55.8 91 45.1
Manes.14G078900 Manihot esculenta HOM05D007106 ORTHO05D007770 2.0e-06 55.8 95 42.1
Nitab4.5_0006000g0100 Nicotiana tabacum HOM05D007106 ORTHO05D007770 3.5e-06 55.1 96 42.7
Glyma.05G026000 Glycine max HOM05D007106 ORTHO05D007770 4.5e-06 54.7 91 40.7
MBI19_g38148_MAGBIO Magnolia biondii HOM05D007691 ORTHO05D008758 5.9e-06 54.3 91 44.0
Sed0002642 Sechium edule HOM05D007106 ORTHO05D007770 5.9e-06 54.3 87 40.2
vmacro17537 Vaccinium macrocarpon HOM05D007106 ORTHO05D007770 5.9e-06 54.3 88 46.6
ATR0564G057 Amborella trichopoda HOM05D007106 ORTHO05D007770 7.8e-06 53.9 84 41.7
CDE04G1322 Ceratophyllum demersum HOM05D007106 ORTHO05D007770 7.8e-06 53.9 86 43.0
FAN08G1525 Fragaria x ananassa HOM05D007106 ORTHO05D007770 7.8e-06 53.9 88 44.3
Lalb_Chr21g0317311 Lupinus albus HOM05D007691 ORTHO05D008758 7.8e-06 53.9 84 39.3


User provided reference genes

Program Settings