Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022754.1 Olea europaea HOM05D003650 ORTHO05D004213 8.2e-70 266.9 134 100.0
Oeu008162.1 Olea europaea HOM05D003650 ORTHO05D004213 1.7e-62 242.7 134 89.6
MSTRG.6431 Avicennia marina HOM05D003650 ORTHO05D004213 4.7e-57 224.6 134 80.6
SalBow6G5443 Salvia bowleyana HOM05D003650 ORTHO05D004213 1.2e-55 219.9 134 79.9
Migut.J01760 Erythranthe guttata HOM05D003650 ORTHO05D004213 1.3e-54 216.5 133 77.4
Dinv39600 Davidia involucrata HOM05D003650 ORTHO05D004213 4.8e-54 214.5 135 77.0
Sopen04g007820 Solanum pennellii HOM05D003650 ORTHO05D004213 8.3e-54 213.8 134 73.1
Lj2A385G21 Lonicera japonica HOM05D003650 ORTHO05D004213 1.1e-53 213.4 136 75.0
Solyc04g015740.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 1.1e-53 213.4 134 72.4
COL.COLO4_28278 Corchorus olitorius HOM05D003650 ORTHO05D004213 1.4e-53 213.0 135 77.8
CAN.G676.68 Capsicum annuum HOM05D003650 ORTHO05D004213 2.4e-53 212.2 133 75.9
Nitab4.5_0010636g0040 Nicotiana tabacum HOM05D003650 ORTHO05D004213 3.1e-53 211.8 134 71.6
Nitab4.5_0005195g0070 Nicotiana tabacum HOM05D003650 ORTHO05D004213 9.1e-53 210.3 134 70.9
CSS0010444 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 1.2e-52 209.9 135 76.3
PGSC0003DMG400027249 Solanum tuberosum HOM05D003650 ORTHO05D004213 1.6e-52 209.5 134 73.1
Peaxi162Scf00130g00016 Petunia axillaris HOM05D003650 ORTHO05D004213 3.5e-52 208.4 134 71.6
Actinidia39226 Actinidia chinensis HOM05D003650 ORTHO05D004213 5.9e-52 207.6 135 76.3
Thecc.05G153700 Theobroma cacao HOM05D003650 ORTHO05D004213 5.9e-52 207.6 136 74.3
TWI74G1194 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 5.9e-52 207.6 134 76.1
Actinidia09330 Actinidia chinensis HOM05D003650 ORTHO05D004213 7.7e-52 207.2 135 75.6
Cc06_g17090 Coffea canephora HOM05D003650 ORTHO05D004213 1.3e-51 206.5 134 74.6
Duzib128G1026 Durio zibethinus HOM05D003650 ORTHO05D004213 1.7e-51 206.1 136 73.5
Duzib205G0897 Durio zibethinus HOM05D003650 ORTHO05D004213 5.0e-51 204.5 136 72.1
Hma1.2p1_2002F.1_g310720 Hydrangea macrophylla HOM05D003650 ORTHO05D004213 5.0e-51 204.5 134 71.6
Duzib093G1511 Durio zibethinus HOM05D003650 ORTHO05D004213 6.5e-51 204.1 136 73.5
Manes.09G021900 Manihot esculenta HOM05D003650 ORTHO05D004213 6.5e-51 204.1 134 70.9
Prupe.7G061300 Prunus persica HOM05D003650 ORTHO05D004213 6.5e-51 204.1 135 74.1
TWI77G0711 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 1.5e-50 203.0 134 70.9
DCAR_013601 Daucus carota HOM05D003650 ORTHO05D004213 1.9e-50 202.6 134 73.1
MD12G1073600 Malus domestica HOM05D003650 ORTHO05D004213 1.9e-50 202.6 135 72.6
MD14G1071900 Malus domestica HOM05D003650 ORTHO05D004213 1.9e-50 202.6 135 73.3
SGA_v2.0_scaffold69G23114 Striga asiatica HOM05D003650 ORTHO05D004213 1.9e-50 202.6 135 72.6
CiPaw.09G038100 Carya illinoinensis HOM05D003650 ORTHO05D004213 2.5e-50 202.2 135 73.3
Cpa.g.sc92.50 Carica papaya HOM05D003650 ORTHO05D004213 9.4e-50 200.3 135 71.1
Glyma.10G097600 Glycine max HOM05D003650 ORTHO05D004213 9.4e-50 200.3 134 70.9
vmacro07855 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 9.4e-50 200.3 135 71.1
Ciclev10004391m.g Citrus clementina HOM05D003650 ORTHO05D004213 1.2e-49 199.9 132 69.7
Eucgr.A02349 Eucalyptus grandis HOM05D003650 ORTHO05D004213 1.6e-49 199.5 134 70.9
RcHm_v2.0_Chr3g0482321 Rosa chinensis HOM05D003650 ORTHO05D004213 2.1e-49 199.1 135 71.1
FvH4_6g23790 Fragaria vesca HOM05D003650 ORTHO05D004213 2.7e-49 198.7 135 70.4
FAN05G4085 Fragaria x ananassa HOM05D003650 ORTHO05D004213 2.7e-49 198.7 135 70.4
FAN14G5543 Fragaria x ananassa HOM05D003650 ORTHO05D004213 2.7e-49 198.7 135 70.4
Manes.08G050700 Manihot esculenta HOM05D003650 ORTHO05D004213 2.7e-49 198.7 134 67.9
FAN02G1020 Fragaria x ananassa HOM05D003650 ORTHO05D004213 6.1e-49 197.6 135 69.6
FAN09G0940 Fragaria x ananassa HOM05D003650 ORTHO05D004213 6.1e-49 197.6 135 69.6
Phvul.007G252800 Phaseolus vulgaris HOM05D003650 ORTHO05D004213 6.1e-49 197.6 134 70.1
PGR004G2044 Punica granatum HOM05D003650 ORTHO05D004213 8.0e-49 197.2 135 71.9
Lju124C41T4 Lonicera japonica HOM05D003650 ORTHO05D004213 1.0e-48 196.8 134 71.6
VMungo0720G2955 Vigna mungo HOM05D003650 ORTHO05D004213 1.0e-48 196.8 134 68.7
GSVIVG01033278001 Vitis vinifera HOM05D003650 ORTHO05D004213 1.0e-48 196.8 135 70.4
CANSAT80G0970 Cannabis sativa HOM05D003650 ORTHO05D004213 1.8e-48 196.1 135 69.6
AUR62024446 Chenopodium quinoa HOM05D003650 ORTHO05D004213 1.8e-48 196.1 134 68.7
AUR62026036 Chenopodium quinoa HOM05D003650 ORTHO05D004213 2.3e-48 195.7 134 67.9
Potri.016G055700 Populus trichocarpa HOM05D003650 ORTHO05D004213 2.3e-48 195.7 134 69.4
Rhsim03G0022300 Rhododendron simsii HOM05D003650 ORTHO05D004213 2.3e-48 195.7 135 71.1
Hund19149 Selenicereus undatus HOM05D003650 ORTHO05D004213 2.3e-48 195.7 134 68.7
Ah.13g076450 Amaranthus hybridus HOM05D003650 ORTHO05D004213 5.2e-48 194.5 134 66.4
Haze_19859 Corylus avellana HOM05D003650 ORTHO05D004213 5.2e-48 194.5 134 67.9
EL10Ac3g07088 Beta vulgaris HOM05D003650 ORTHO05D004213 6.8e-48 194.1 134 68.7
Lalb_Chr20g0110481 Lupinus albus HOM05D003650 ORTHO05D004213 1.2e-47 193.4 134 67.2
Rhsim03G0021200 Rhododendron simsii HOM05D003650 ORTHO05D004213 1.2e-47 193.4 135 70.4
CiPaw.10G033200 Carya illinoinensis HOM05D003650 ORTHO05D004213 1.5e-47 193.0 134 69.4
arahy.Tifrunner.gnm1.ann1.MS35EQ Arachis hypogaea HOM05D003650 ORTHO05D004213 2.0e-47 192.6 134 67.9
Glyma.02G184100 Glycine max HOM05D003650 ORTHO05D004213 2.0e-47 192.6 134 69.4
Sc13g0001770 Simmondsia chinensis HOM05D003650 ORTHO05D004213 2.0e-47 192.6 134 67.9
Lsat_1_v5_gn_9_29041 Lactuca sativa HOM05D003650 ORTHO05D004213 3.4e-47 191.8 134 73.1
arahy.Tifrunner.gnm1.ann1.YDMB1U Arachis hypogaea HOM05D003650 ORTHO05D004213 4.4e-47 191.4 134 67.9
CSS0035654 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 5.7e-47 191.0 135 69.6
Psat6g120000 Pisum sativum HOM05D003650 ORTHO05D004213 5.7e-47 191.0 134 65.7
Nitab4.5_0008441g0020 Nicotiana tabacum HOM05D003650 ORTHO05D004213 7.5e-47 190.7 135 69.6
AT3G57420 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 9.8e-47 190.3 138 68.8
CSS0046501 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 9.8e-47 190.3 135 68.9
Lj5g0024914 Lotus japonicus HOM05D003650 ORTHO05D004213 9.8e-47 190.3 134 66.4
QL07p000311 Quercus lobata HOM05D003650 ORTHO05D004213 9.8e-47 190.3 134 69.4
TAR633G1518 Trochodendron aralioides HOM05D003650 ORTHO05D004213 9.8e-47 190.3 135 68.1
ECA248G2213 Erigeron canadensis HOM05D003650 ORTHO05D004213 1.7e-46 189.5 136 70.6
Sabra16G0058400 Salix brachista HOM05D003650 ORTHO05D004213 1.7e-46 189.5 134 67.2
Thhalv10005801m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 2.2e-46 189.1 139 68.3
Gohir.A09G122300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 2.2e-46 189.1 136 67.6
TAR636G3054 Trochodendron aralioides HOM05D003650 ORTHO05D004213 2.2e-46 189.1 135 68.9
unitig_26.g9048 Utricularia gibba HOM05D003650 ORTHO05D004213 2.8e-46 188.7 133 65.4
Cc02_g29000 Coffea canephora HOM05D003650 ORTHO05D004213 3.7e-46 188.3 135 67.4
Gorai.006G136600 Gossypium raimondii HOM05D003650 ORTHO05D004213 3.7e-46 188.3 136 67.6
Aqoxy2G00151 Aquilegia oxysepala HOM05D003650 ORTHO05D004213 4.9e-46 188.0 135 68.1
Gohir.A09G122200 Gossypium hirsutum HOM05D003650 ORTHO05D004213 6.3e-46 187.6 136 67.6
Gohir.D09G118300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 6.3e-46 187.6 136 67.6
Nitab4.5_0000707g0190 Nicotiana tabacum HOM05D003650 ORTHO05D004213 6.3e-46 187.6 135 68.1
TPR.G10642 Trifolium pratense HOM05D003650 ORTHO05D004213 6.3e-46 187.6 134 64.9
Carub.0005s2426 Capsella rubella HOM05D003650 ORTHO05D004213 8.3e-46 187.2 138 68.1
Potri.006G051000 Populus trichocarpa HOM05D003650 ORTHO05D004213 8.3e-46 187.2 132 66.7
Sopen01g034570 Solanum pennellii HOM05D003650 ORTHO05D004213 8.3e-46 187.2 135 68.1
ClCG10G016580 Citrullus lanatus HOM05D003650 ORTHO05D004213 1.1e-45 186.8 135 68.9
Gorai.006G136700 Gossypium raimondii HOM05D003650 ORTHO05D004213 1.1e-45 186.8 136 66.9
Solyc01g087600.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 1.1e-45 186.8 135 68.1
AL5G38950 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 1.4e-45 186.4 138 66.7
Gohir.D09G118400 Gossypium hirsutum HOM05D003650 ORTHO05D004213 1.4e-45 186.4 136 67.6
PGSC0003DMG400006853 Solanum tuberosum HOM05D003650 ORTHO05D004213 1.4e-45 186.4 135 68.1
Atru.chr1.1095 Acer truncatum HOM05D003650 ORTHO05D004213 1.8e-45 186.0 133 64.7
MELO3C009717.2 Cucumis melo HOM05D003650 ORTHO05D004213 1.8e-45 186.0 135 68.1
ECA247G3671 Erigeron canadensis HOM05D003650 ORTHO05D004213 1.8e-45 186.0 135 68.9
Thhalv10016286m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 1.8e-45 186.0 137 65.7
Sabra06G0035700 Salix brachista HOM05D003650 ORTHO05D004213 1.8e-45 186.0 134 65.7
AT2G41770 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 2.4e-45 185.7 137 65.7
Oeu027406.1 Olea europaea HOM05D003650 ORTHO05D004213 2.4e-45 185.7 133 63.9
Sp4g24040 Schrenkiella parvula HOM05D003650 ORTHO05D004213 2.4e-45 185.7 137 66.4
THA.LOC104802108 Tarenaya hassleriana HOM05D003650 ORTHO05D004213 2.4e-45 185.7 139 64.7
Peaxi162Scf00694g00117 Petunia axillaris HOM05D003650 ORTHO05D004213 3.1e-45 185.3 135 67.4
Rhsim07G0058200 Rhododendron simsii HOM05D003650 ORTHO05D004213 3.1e-45 185.3 135 67.4
AL4G40080 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 4.1e-45 184.9 137 65.7
Ah.04g151780 Amaranthus hybridus HOM05D003650 ORTHO05D004213 5.4e-45 184.5 132 63.6
CAN.G219.62 Capsicum annuum HOM05D003650 ORTHO05D004213 5.4e-45 184.5 135 67.4
Sed0014274 Sechium edule HOM05D003650 ORTHO05D004213 5.4e-45 184.5 135 66.7
HanXRQChr01g0008741 Helianthus annuus HOM05D003650 ORTHO05D004213 9.1e-45 183.7 136 69.1
Aa31LG1G23780 Aethionema arabicum HOM05D003650 ORTHO05D004213 1.6e-44 183.0 137 63.5
CARHR136860 Cardamine hirsuta HOM05D003650 ORTHO05D004213 1.6e-44 183.0 137 64.2
Ca_26017_v3 Cicer arietinum L. HOM05D003650 ORTHO05D004213 2.7e-44 182.2 135 63.0
Sp5g05180 Schrenkiella parvula HOM05D003650 ORTHO05D004213 3.5e-44 181.8 138 68.1
Carub.0004s2405 Capsella rubella HOM05D003650 ORTHO05D004213 7.7e-44 180.6 137 64.2
BraA05t19245Z Brassica rapa HOM05D003650 ORTHO05D004213 1.3e-43 179.9 137 63.5
RcHm_v2.0_Chr1g0317301 Rosa chinensis HOM05D003650 ORTHO05D004213 1.3e-43 179.9 133 65.4
GSVIVG01032164001 Vitis vinifera HOM05D003650 ORTHO05D004213 1.7e-43 179.5 133 64.7
BcaNung02835 Brassica carinata HOM05D003650 ORTHO05D004213 3.8e-43 178.3 137 62.8
A05p02520 Brassica napus HOM05D003650 ORTHO05D004213 3.8e-43 178.3 137 62.8
CARHR167620 Cardamine hirsuta HOM05D003650 ORTHO05D004213 3.8e-43 178.3 140 63.6
CANSAT80G2225 Cannabis sativa HOM05D003650 ORTHO05D004213 5.0e-43 177.9 135 65.2
Lsat_1_v5_gn_5_161461 Lactuca sativa HOM05D003650 ORTHO05D004213 5.0e-43 177.9 134 65.7
Prupe.2G020200 Prunus persica HOM05D003650 ORTHO05D004213 5.0e-43 177.9 133 61.7
A03p23420 Brassica napus HOM05D003650 ORTHO05D004213 8.6e-43 177.2 137 63.5
C03p27940 Brassica napus HOM05D003650 ORTHO05D004213 8.6e-43 177.2 137 62.8
C04p02980 Brassica napus HOM05D003650 ORTHO05D004213 8.6e-43 177.2 137 62.8
BolC3t15166H Brassica oleracea HOM05D003650 ORTHO05D004213 8.6e-43 177.2 137 62.8
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 8.6e-43 177.2 135 63.0
BraA03t11559Z Brassica rapa HOM05D003650 ORTHO05D004213 8.6e-43 177.2 137 63.5
HanXRQChr10g0288771 Helianthus annuus HOM05D003650 ORTHO05D004213 1.1e-42 176.8 136 68.4
Lalb_Chr06g0173451 Lupinus albus HOM05D003650 ORTHO05D004213 1.1e-42 176.8 134 63.4
MD07G1018300 Malus domestica HOM05D003650 ORTHO05D004213 1.1e-42 176.8 133 63.9
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 1.1e-42 176.8 118 69.5
vmacro13691 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 3.3e-42 175.3 136 64.0
PSO384G3418 Papaver somniferum HOM05D003650 ORTHO05D004213 4.2e-42 174.9 136 64.7
PSO339G5560 Papaver somniferum HOM05D003650 ORTHO05D004213 5.6e-42 174.5 136 64.0
MELO3C023570.2 Cucumis melo HOM05D003650 ORTHO05D004213 9.5e-42 173.7 137 63.5
Nn7g36273 Nelumbo nucifera HOM05D003650 ORTHO05D004213 9.5e-42 173.7 135 63.0
FvH4_7g01460 Fragaria vesca HOM05D003650 ORTHO05D004213 4.7e-41 171.4 133 62.4
FAN10G4002 Fragaria x ananassa HOM05D003650 ORTHO05D004213 8.0e-41 170.6 133 62.4
ATR0626G026 Amborella trichopoda HOM05D003650 ORTHO05D004213 1.8e-40 169.5 132 59.1
CsaV3_7G030820 Cucumis sativus L. HOM05D003650 ORTHO05D004213 1.8e-40 169.5 137 62.8
ClCG09G003920 Citrullus lanatus HOM05D003650 ORTHO05D004213 5.2e-40 167.9 137 62.0
FAN06G0077 Fragaria x ananassa HOM05D003650 ORTHO05D004213 5.2e-40 167.9 133 61.7
Actinidia02535 Actinidia chinensis HOM05D003650 ORTHO05D004213 8.9e-40 167.2 126 64.3
SEGI_32089 Sequoiadendron giganteum HOM05D003650 ORTHO05D004213 4.1e-37 158.3 135 52.6
Sed0006713 Sechium edule HOM05D003650 ORTHO05D004213 1.6e-36 156.4 137 59.1
CDE07G0124 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 2.0e-36 156.0 136 57.4
Zm00001eb287230 Zea mays HOM05D003650 ORTHO05D004213 4.6e-36 154.8 137 56.9
Os05g0391200 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 1.0e-35 153.7 137 56.9
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 7.3e-34 147.5 131 57.3
HPP92_010728 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.1e-32 142.1 137 54.7
Sed0014161 Sechium edule HOM05D003650 ORTHO05D004213 5.2e-32 141.4 112 63.4
Os07g0656400 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 4.4e-31 138.3 137 49.6
Zm00001eb329540 Zea mays HOM05D003650 ORTHO05D004213 1.1e-29 133.7 137 49.6
CDE11G0464 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 5.4e-21 104.8 106 50.9
CANSAT80G1317 Cannabis sativa HOM05D003650 ORTHO05D004213 2.1e-20 102.8 65 69.2
Pp3c17_18550 Physcomitrium patens HOM05D003650 ORTHO05D004213 8.6e-19 97.4 136 37.5
Pp3c14_20380 Physcomitrium patens HOM05D003650 ORTHO05D004213 1.9e-18 96.3 136 36.0
SMO165G0114 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 2.6e-15 85.9 134 33.6
SMO329G0078 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 1.1e-13 80.5 133 30.1
Mapoly0004s0304 Marchantia polymorpha HOM05D003650 ORTHO05D004213 1.7e-11 73.2 132 29.5


User provided reference genes

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