Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 2.8e-227 791.6 397 100.0
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 2.2e-150 536.2 396 64.6
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 3.7e-150 535.4 394 66.8
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 5.9e-148 528.1 395 65.8
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 7.7e-148 527.7 395 65.8
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.8e-147 525.4 395 65.6
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 1.2e-145 520.4 395 65.1
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.4e-144 516.9 395 63.3
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 1.5e-140 503.4 394 64.0
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 3.2e-138 495.7 394 61.9
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 3.6e-137 492.3 397 61.5
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.1e-135 487.3 399 62.4
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 3.3e-135 485.7 374 63.1
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.4e-133 479.6 395 60.3
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 9.1e-133 477.6 396 58.1
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 2.0e-132 476.5 396 58.1
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 2.0e-132 476.5 391 60.1
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 1.1e-130 470.7 401 59.6
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.1e-130 470.7 395 57.2
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 3.6e-129 465.7 399 59.1
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 2.3e-128 463.0 390 56.7
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 3.0e-128 462.6 395 58.7
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 1.1e-125 454.1 391 57.8
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 4.1e-125 452.2 395 56.5
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 9.1e-125 451.1 388 56.7
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 2.0e-124 449.9 395 56.2
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 2.6e-124 449.5 392 56.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 3.5e-124 449.1 391 56.5
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 5.0e-123 445.3 400 54.2
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 2.5e-122 443.0 393 54.7
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 7.2e-122 441.4 392 54.1
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 7.2e-122 441.4 395 53.9
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.6e-121 440.3 393 55.2
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 2.1e-121 439.9 392 54.3
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 8.0e-121 438.0 392 55.6
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.0e-120 437.6 393 55.0
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.8e-120 436.8 392 55.4
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.0e-120 436.0 393 54.7
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 6.8e-120 434.9 390 55.9
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 1.2e-119 434.1 378 55.3
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.5e-119 433.7 393 54.5
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 1.5e-119 433.7 392 54.8
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.0e-119 433.3 393 54.2
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 2.6e-119 433.0 396 57.6
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.7e-118 430.3 395 52.7
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 2.2e-118 429.9 406 54.4
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 2.8e-118 429.5 400 52.5
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 6.3e-118 428.3 393 54.7
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 9.1e-117 424.5 395 51.6
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 5.9e-116 421.8 393 52.7
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 2.2e-115 419.9 392 52.3
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 5.0e-115 418.7 395 51.9
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 5.0e-115 418.7 389 55.3
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 2.5e-114 416.4 390 51.5
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 2.1e-113 413.3 345 57.7
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 2.1e-113 413.3 395 49.9
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 2.7e-113 412.9 392 52.3
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 1.8e-112 410.2 395 49.1
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 2.0e-111 406.8 389 55.3
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 3.4e-111 406.0 395 49.1
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 4.4e-111 405.6 391 50.6
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 5.7e-111 405.2 392 51.3
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 1.3e-110 404.1 394 51.8
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 1.3e-110 404.1 393 49.6
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 1.3e-110 404.1 393 50.1
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 3.7e-110 402.5 393 48.3
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 3.7e-110 402.5 394 51.0
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 7.0e-109 398.3 392 52.3
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 7.0e-109 398.3 397 48.4
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 1.6e-108 397.1 390 51.0
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 2.0e-108 396.7 393 48.3
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 2.0e-108 396.7 390 49.2
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 3.5e-108 396.0 395 51.4
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 2.9e-107 392.9 394 51.0
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 1.9e-106 390.2 335 59.4
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 5.5e-106 388.7 390 49.2
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 7.2e-106 388.3 390 49.0
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 9.5e-106 387.9 396 47.5
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.4e-104 384.0 389 50.4
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 1.4e-104 384.0 390 49.5
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 1.2e-103 380.9 396 49.0
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 1.3e-102 377.5 411 47.4
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 1.7e-102 377.1 311 61.7
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 2.2e-102 376.7 395 49.1
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 2.8e-102 376.3 394 50.3
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 4.9e-102 375.6 387 50.9
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 8.3e-102 374.8 395 48.6
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 1.4e-101 374.0 394 48.7
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 3.2e-101 372.9 390 49.2
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 1.2e-100 370.9 398 48.5
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 4.5e-100 369.0 401 47.6
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 7.8e-100 368.2 406 49.0
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.3e-99 367.5 418 45.9
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.3e-99 367.5 418 45.9
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.3e-99 367.5 406 48.8
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 5.0e-99 365.5 394 48.5
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 1.1e-98 364.4 418 45.5
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.5e-98 364.0 393 47.3
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 3.3e-98 362.8 393 45.5
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 1.0e-96 357.8 397 47.1
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 1.4e-96 357.5 394 44.7
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 3.1e-96 356.3 418 44.5
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 5.2e-96 355.5 419 44.2
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 6.8e-96 355.1 316 55.1
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.4e-93 346.7 392 45.9
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 1.3e-91 340.9 392 46.9
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 7.3e-90 335.1 392 45.2
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.2e-89 334.3 374 43.0
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.6e-89 334.0 265 62.3
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 4.0e-88 329.3 267 59.6
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 1.6e-76 290.8 305 48.9
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 1.7e-67 260.8 181 70.7
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 8.4e-62 241.9 427 36.1
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.9e-46 190.3 255 38.8
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 5.3e-40 169.5 259 34.4
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 5.1e-35 152.9 345 29.3
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 5.1e-35 152.9 246 34.6
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.9e-34 151.0 197 44.2
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 3.2e-29 133.7 427 30.0
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 6.1e-28 129.4 403 28.3
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 6.1e-28 129.4 403 28.3
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 1.0e-27 128.6 180 41.7
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 1.8e-27 127.9 247 34.4
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 3.7e-25 120.2 358 26.8
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 1.2e-23 115.2 351 24.8
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 1.3e-22 111.7 317 26.5
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 5.7e-18 96.3 177 36.2
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 4.5e-15 86.7 290 27.6
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 8.5e-14 82.4 106 42.5
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 2.8e-09 67.4 279 26.9
Dinv09820 Davidia involucrata HOM05D000025 ORTHO05D000450 7.0e-08 62.8 47 61.7


User provided reference genes

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