Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022615.1 Olea europaea HOM05D004889 ORTHO05D005478 1.2e-80 303.1 159 100.0
MSTRG.23064 Avicennia marina HOM05D004889 ORTHO05D005478 1.6e-72 276.2 155 92.3
SGA_v2.0_scaffold56G20073 Striga asiatica HOM05D004889 ORTHO05D005478 5.2e-71 271.2 155 92.3
SalBow5G2608 Salvia bowleyana HOM05D004889 ORTHO05D005478 2.6e-70 268.9 167 86.8
Migut.I00111 Erythranthe guttata HOM05D004889 ORTHO05D005478 3.4e-70 268.5 155 90.3
Lj5A118T73 Lonicera japonica HOM05D004889 ORTHO05D005478 1.3e-69 266.5 154 89.6
Rhsim12G0159900 Rhododendron simsii HOM05D004889 ORTHO05D005478 2.2e-69 265.8 154 89.0
Dinv19901 Davidia involucrata HOM05D004889 ORTHO05D005478 8.3e-69 263.8 154 88.3
TAR039G0004 Trochodendron aralioides HOM05D004889 ORTHO05D005478 1.4e-68 263.1 154 87.0
TAR629G1437 Trochodendron aralioides HOM05D004889 ORTHO05D005478 1.4e-68 263.1 154 87.0
vmacro16573 Vaccinium macrocarpon HOM05D004889 ORTHO05D005478 1.8e-68 262.7 154 87.7
AUR62027699 Chenopodium quinoa HOM05D004889 ORTHO05D005478 2.4e-68 262.3 155 87.1
ATR0712G167 Amborella trichopoda HOM05D004889 ORTHO05D005478 5.4e-68 261.2 154 86.4
GSVIVG01008085001 Vitis vinifera HOM05D004889 ORTHO05D005478 5.4e-68 261.2 151 89.4
TAR622G0909 Trochodendron aralioides HOM05D004889 ORTHO05D005478 7.0e-68 260.8 154 86.4
TAR640G0002 Trochodendron aralioides HOM05D004889 ORTHO05D005478 7.0e-68 260.8 154 86.4
Sed0007285 Sechium edule HOM05D004889 ORTHO05D005478 9.1e-68 260.4 154 87.7
EL10Ac8g20579 Beta vulgaris HOM05D004889 ORTHO05D005478 1.2e-67 260.0 155 86.5
Manes.06G097700 Manihot esculenta HOM05D004889 ORTHO05D005478 2.0e-67 259.2 154 86.4
VMungo1215G2590 Vigna mungo HOM05D004889 ORTHO05D005478 2.0e-67 259.2 154 87.0
arahy.Tifrunner.gnm1.ann1.78U3A7 Arachis hypogaea HOM05D004889 ORTHO05D005478 3.5e-67 258.5 154 86.4
arahy.Tifrunner.gnm1.ann1.9HIF7S Arachis hypogaea HOM05D004889 ORTHO05D005478 3.5e-67 258.5 154 86.4
Manes.14G073400 Manihot esculenta HOM05D004889 ORTHO05D005478 4.5e-67 258.1 154 85.1
TWI60G0433 Tripterygium wilfordii HOM05D004889 ORTHO05D005478 4.5e-67 258.1 154 85.7
MELO3C002218.2 Cucumis melo HOM05D004889 ORTHO05D005478 5.9e-67 257.7 154 86.4
CsaV3_1G008010 Cucumis sativus L. HOM05D004889 ORTHO05D005478 5.9e-67 257.7 154 86.4
Phvul.003G194500 Phaseolus vulgaris HOM05D004889 ORTHO05D005478 5.9e-67 257.7 154 86.4
PGR083G1434 Punica granatum HOM05D004889 ORTHO05D005478 5.9e-67 257.7 154 87.0
CSS0046467 Camellia sinensis var. sinensis HOM05D004889 ORTHO05D005478 7.7e-67 257.3 155 87.1
Hma1.2p1_3047F.1_g332110 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 7.7e-67 257.3 154 85.1
Nn3g17093 Nelumbo nucifera HOM05D004889 ORTHO05D005478 1.0e-66 256.9 154 85.1
Glyma.05G031100 Glycine max HOM05D004889 ORTHO05D005478 1.3e-66 256.5 154 85.7
MD06G1185300 Malus domestica HOM05D004889 ORTHO05D005478 1.7e-66 256.1 154 87.0
Actinidia04935 Actinidia chinensis HOM05D004889 ORTHO05D005478 2.2e-66 255.8 154 86.4
Nn4g22998 Nelumbo nucifera HOM05D004889 ORTHO05D005478 2.9e-66 255.4 154 83.8
Hund21165 Selenicereus undatus HOM05D004889 ORTHO05D005478 2.9e-66 255.4 155 84.5
SEGI_11308 Sequoiadendron giganteum HOM05D004889 ORTHO05D005478 5.0e-66 254.6 154 84.4
CDE12G0348 Ceratophyllum demersum HOM05D004889 ORTHO05D005478 6.5e-66 254.2 154 84.4
Potri.015G090200 Populus trichocarpa HOM05D004889 ORTHO05D005478 6.5e-66 254.2 154 83.1
Prupe.5G184200 Prunus persica HOM05D004889 ORTHO05D005478 6.5e-66 254.2 154 87.7
Sabra15G0112400 Salix brachista HOM05D004889 ORTHO05D005478 6.5e-66 254.2 154 83.8
Dinv38643 Davidia involucrata HOM05D004889 ORTHO05D005478 8.5e-66 253.8 154 86.4
Lj4g0007492 Lotus japonicus HOM05D004889 ORTHO05D005478 1.1e-65 253.4 154 85.1
Aqoxy3G00822 Aquilegia oxysepala HOM05D004889 ORTHO05D005478 1.5e-65 253.1 154 85.1
CAN.G628.53 Capsicum annuum HOM05D004889 ORTHO05D005478 1.9e-65 252.7 154 84.4
MBI04_g18038_MAGBIO Magnolia biondii HOM05D004889 ORTHO05D005478 1.9e-65 252.7 154 84.4
CANSAT80G0562 Cannabis sativa HOM05D004889 ORTHO05D005478 2.5e-65 252.3 154 85.1
RcHm_v2.0_Chr7g0180311 Rosa chinensis HOM05D004889 ORTHO05D005478 2.5e-65 252.3 154 85.1
Sed0005054 Sechium edule HOM05D004889 ORTHO05D005478 2.5e-65 252.3 154 85.1
PGSC0003DMG400033066 Solanum tuberosum HOM05D004889 ORTHO05D005478 3.2e-65 251.9 154 84.4
Gohir.A07G065700 Gossypium hirsutum HOM05D004889 ORTHO05D005478 4.2e-65 251.5 154 82.5
Potri.012G093000 Populus trichocarpa HOM05D004889 ORTHO05D005478 4.2e-65 251.5 154 83.8
HanXRQChr09g0271391 Helianthus annuus HOM05D004889 ORTHO05D005478 5.5e-65 251.1 154 85.1
Psat4g054400 Pisum sativum HOM05D004889 ORTHO05D005478 5.5e-65 251.1 154 83.8
unitig_0.g784 Utricularia gibba HOM05D004889 ORTHO05D005478 9.4e-65 250.4 161 82.0
FAN08G0221 Fragaria x ananassa HOM05D002295 ORTHO05D002789 1.6e-64 249.6 154 84.4
FAN13G0367 Fragaria x ananassa HOM05D004889 ORTHO05D005478 1.6e-64 249.6 154 84.4
Solyc06g071140.3 Solanum lycopersicum HOM05D004889 ORTHO05D005478 1.6e-64 249.6 154 83.8
Sopen06g027440 Solanum pennellii HOM05D004889 ORTHO05D005478 1.6e-64 249.6 154 83.8
FvH4_5g15820 Fragaria vesca HOM05D004889 ORTHO05D005478 2.1e-64 249.2 154 84.4
FAN18G0072 Fragaria x ananassa HOM05D002295 ORTHO05D002789 2.1e-64 249.2 154 84.4
Peaxi162Scf00496g00012 Petunia axillaris HOM05D004889 ORTHO05D005478 2.1e-64 249.2 154 83.8
Ca_21861_v3 Cicer arietinum L. HOM05D004889 ORTHO05D005478 2.7e-64 248.8 154 83.1
HPP92_012530 Vanilla planifolia HOM05D004889 ORTHO05D005478 3.6e-64 248.4 154 82.5
Eucgr.B00394 Eucalyptus grandis HOM05D004889 ORTHO05D005478 4.7e-64 248.1 154 84.4
PSO161G0045 Papaver somniferum HOM05D004889 ORTHO05D005478 6.1e-64 247.7 154 84.4
Mapoly0075s0020 Marchantia polymorpha HOM05D004889 ORTHO05D005478 8.0e-64 247.3 154 83.1
Sabra12G0067700 Salix brachista HOM05D004889 ORTHO05D005478 8.0e-64 247.3 145 86.2
PSO478G3716 Papaver somniferum HOM05D004889 ORTHO05D005478 1.0e-63 246.9 154 84.4
Lsat_1_v5_gn_4_105560 Lactuca sativa HOM05D004889 ORTHO05D005478 3.0e-63 245.4 154 85.1
Duzib205G1395 Durio zibethinus HOM05D004889 ORTHO05D005478 6.8e-63 244.2 154 81.8
Duzib084G1322 Durio zibethinus HOM05D004889 ORTHO05D005478 1.5e-62 243.0 154 81.2
Ciclev10019625m.g Citrus clementina HOM05D004889 ORTHO05D005478 2.0e-62 242.7 154 81.8
Gohir.D07G070200 Gossypium hirsutum HOM05D004889 ORTHO05D005478 2.6e-62 242.3 154 80.5
Os07g0192900 Oryza sativa ssp. japonica HOM05D004889 ORTHO05D005478 3.4e-62 241.9 154 79.2
AUR62031228 Chenopodium quinoa HOM05D004889 ORTHO05D005478 4.4e-62 241.5 194 69.1
Gorai.001G074100 Gossypium raimondii HOM05D004889 ORTHO05D005478 4.4e-62 241.5 154 80.5
QL03p038490 Quercus lobata HOM05D004889 ORTHO05D005478 4.4e-62 241.5 180 72.8
COL.COLO4_33419 Corchorus olitorius HOM05D004889 ORTHO05D005478 7.5e-62 240.7 154 81.2
Lalb_Chr07g0182371 Lupinus albus HOM05D004889 ORTHO05D005478 1.7e-61 239.6 154 82.5
Duzib068G1437 Durio zibethinus HOM05D004889 ORTHO05D005478 2.2e-61 239.2 154 79.9
Lalb_Chr13g0298111 Lupinus albus HOM05D004889 ORTHO05D005478 2.8e-61 238.8 154 81.8
Medtr4g107410 Medicago truncatula HOM05D004889 ORTHO05D005478 3.7e-61 238.4 155 80.6
Nitab4.5_0003744g0020 Nicotiana tabacum HOM05D004889 ORTHO05D005478 3.7e-61 238.4 154 81.8
CiPaw.11G036000 Carya illinoinensis HOM05D004889 ORTHO05D005478 4.9e-61 238.0 154 78.6
Thecc.03G076300 Theobroma cacao HOM05D004889 ORTHO05D005478 4.9e-61 238.0 154 79.9
Pp3c4_160 Physcomitrium patens HOM05D004889 ORTHO05D005478 6.3e-61 237.7 154 80.5
Nitab4.5_0000026g0250 Nicotiana tabacum HOM05D004889 ORTHO05D005478 8.3e-61 237.3 154 81.2
Nitab4.5_0003595g0020 Nicotiana tabacum HOM05D004889 ORTHO05D005478 8.3e-61 237.3 154 81.2
ClCG01G014310 Citrullus lanatus HOM05D004889 ORTHO05D005478 2.4e-60 235.7 169 75.7
Haze_07757 Corylus avellana HOM05D004889 ORTHO05D005478 2.4e-60 235.7 154 77.9
TPR.G38450 Trifolium pratense HOM05D004889 ORTHO05D005478 3.1e-60 235.3 155 78.7
TWI81G0893 Tripterygium wilfordii HOM05D004889 ORTHO05D005478 9.1e-60 233.8 154 79.9
Cc04_g15980 Coffea canephora HOM05D004889 ORTHO05D005478 3.5e-59 231.9 155 79.4
ECA232G4768 Erigeron canadensis HOM05D000153 ORTHO05D000118 1.7e-58 229.6 154 78.6
THA.LOC104818246 Tarenaya hassleriana HOM05D004889 ORTHO05D005478 8.6e-58 227.3 156 78.2
Hma1.2p1_3047F.1_g332100 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 1.1e-57 226.9 141 82.3
MD14G1191200 Malus domestica HOM05D004889 ORTHO05D005478 3.6e-56 221.9 161 77.6
Cpa.g.sc17.179 Carica papaya HOM05D004889 ORTHO05D005478 1.8e-55 219.5 127 85.8
CDE01G0549 Ceratophyllum demersum HOM05D004889 ORTHO05D005478 2.3e-55 219.2 169 73.4
CBR_g4762 Chara braunii HOM05D004889 ORTHO05D005478 2.9e-53 212.2 154 71.4
Carub.0008s2340 Capsella rubella HOM05D004889 ORTHO05D005478 2.7e-51 205.7 156 72.4
AT5G62640 Arabidopsis thaliana HOM05D004889 ORTHO05D005478 3.5e-51 205.3 156 71.8
AL8G39620 Arabidopsis lyrata HOM05D004889 ORTHO05D005478 1.0e-50 203.8 156 71.2
Aa31LG4G16530 Aethionema arabicum HOM05D004889 ORTHO05D005478 2.8e-48 195.7 196 59.2
HPP92_012535 Vanilla planifolia HOM05D004889 ORTHO05D005478 2.8e-48 195.7 154 68.8
C03p64130 Brassica napus HOM05D004889 ORTHO05D005478 4.7e-48 194.9 156 69.9
BcaC01g02501 Brassica carinata HOM05D004889 ORTHO05D005478 2.3e-47 192.6 156 69.2
A06p29350 Brassica napus HOM05D004889 ORTHO05D005478 2.3e-47 192.6 156 69.2
BcaB02g09666 Brassica carinata HOM05D004889 ORTHO05D005478 5.2e-47 191.4 156 68.6
BcaB02g09670 Brassica carinata HOM05D004889 ORTHO05D005478 5.2e-47 191.4 156 68.6
BraA06t25888Z Brassica rapa HOM05D004889 ORTHO05D005478 1.9e-44 183.0 170 63.5
CARHR276450 Cardamine hirsuta HOM05D004889 ORTHO05D005478 1.9e-44 183.0 146 69.9
Sp2g25820 Schrenkiella parvula HOM05D004889 ORTHO05D005478 1.0e-42 177.2 156 65.4
BolC3t18668H Brassica oleracea HOM05D004889 ORTHO05D005478 3.0e-42 175.6 189 57.1
Ah.09g233410 Amaranthus hybridus HOM05D004889 ORTHO05D005478 2.5e-41 172.6 97 84.5
SMO351G0326 Selaginella moellendorffii HOM05D004889 ORTHO05D005478 2.6e-38 162.5 150 63.3
Actinidia37670 Actinidia chinensis HOM05D004889 ORTHO05D005478 5.8e-38 161.4 97 83.5
Medtr4g107420 Medicago truncatula HOM05D004889 ORTHO05D005478 1.1e-36 157.1 112 76.8
DCAR_016527 Daucus carota HOM05D004889 ORTHO05D005478 1.2e-35 153.7 155 59.4
Medtr0444s0010 Medicago truncatula HOM05D004889 ORTHO05D005478 2.1e-35 152.9 124 71.0
CARHR156590 Cardamine hirsuta HOM05D004889 ORTHO05D005478 1.3e-29 133.7 99 69.7
Hma1.2p1_0104F.1_g050430 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 6.6e-26 121.3 73 80.8
Atru.chr9.2345 Acer truncatum HOM05D004889 ORTHO05D005478 1.6e-24 116.7 70 75.7
Sc12g0006090 Simmondsia chinensis HOM05D004889 ORTHO05D005478 6.8e-23 111.3 62 83.9
Zm00001eb302650 Zea mays HOM05D004889 ORTHO05D005478 9.9e-22 107.5 76 65.8
AagrBONN_evm.TU.Sc2ySwM_228.3309 Anthoceros agrestis HOM05D004889 ORTHO05D005478 6.4e-21 104.8 62 77.4
Gohir.A11G028540 Gossypium hirsutum HOM05D004889 ORTHO05D005478 8.4e-21 104.4 62 77.4
Cre07.g348700 Chlamydomonas reinhardtii HOM05D004889 ORTHO05D005478 2.1e-19 99.8 148 44.6
Nitab4.5_0000003g0080 Nicotiana tabacum HOM05D004889 ORTHO05D005478 3.5e-19 99.0 96 57.3
Hma1.2p1_0104F.1_g050420 Hydrangea macrophylla HOM05D004889 ORTHO05D005478 2.1e-16 89.7 64 75.0
arahy.Tifrunner.gnm1.ann1.KJ948Q Arachis hypogaea HOM05D004889 ORTHO05D005478 4.4e-14 82.0 103 53.4
Migut.D01883 Erythranthe guttata HOM05D000593 ORTHO05D000562 4.9e-13 78.6 86 54.7
SEGI_10816 Sequoiadendron giganteum HOM05D004889 ORTHO05D005478 3.2e-12 75.9 46 80.4
arahy.Tifrunner.gnm1.ann1.GYQ60G Arachis hypogaea HOM05D004889 ORTHO05D005478 2.3e-10 69.7 58 72.4
Thhalv10003972m.g Eutrema salsugineum HOM05D004889 ORTHO05D005478 6.6e-10 68.2 39 79.5
MCO02G371 Micromonas commoda HOM05D004889 ORTHO05D005478 5.6e-09 65.1 156 32.1


User provided reference genes

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