Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022458.1 Olea europaea HOM05D000516 ORTHO05D000409 9.1e-72 273.5 139 100.0
Oeu022456.1 Olea europaea HOM05D000516 ORTHO05D000409 9.1e-64 246.9 127 100.0
Oeu020496.1 Olea europaea HOM05D000516 ORTHO05D000409 1.7e-25 119.8 152 50.0
Gohir.A02G011700 Gossypium hirsutum HOM05D000516 ORTHO05D000409 7.3e-21 104.4 123 52.8
Dinv05075 Davidia involucrata HOM05D000516 ORTHO05D000409 9.6e-21 104.0 93 62.4
SGA_v2.0_scaffold12G06168 Striga asiatica HOM05D000516 ORTHO05D000409 1.2e-20 103.6 140 47.9
CSS0047133 Camellia sinensis var. sinensis HOM05D000516 ORTHO05D000409 1.6e-20 103.2 98 60.2
Hma1.2p1_2415F.1_g321700 Hydrangea macrophylla HOM05D000516 ORTHO05D000409 2.8e-20 102.4 93 60.2
Hund03174 Selenicereus undatus HOM05D000516 ORTHO05D000409 2.8e-20 102.4 93 60.2
EL10Ac3g06006 Beta vulgaris HOM05D000516 ORTHO05D000409 8.1e-20 100.9 99 56.6
Duzib151G0443 Durio zibethinus HOM05D000516 ORTHO05D000409 1.8e-19 99.8 145 48.3
CANSAT78G1650 Cannabis sativa HOM05D000516 ORTHO05D000409 2.4e-19 99.4 99 58.6
Gohir.D02G012500 Gossypium hirsutum HOM05D000516 ORTHO05D000409 4.0e-19 98.6 123 51.2
Gorai.005G015900 Gossypium raimondii HOM05D000516 ORTHO05D000409 4.0e-19 98.6 123 51.2
Cc00_g03570 Coffea canephora HOM05D000516 ORTHO05D000409 5.2e-19 98.2 156 46.2
Oeu034446.1 Olea europaea HOM05D000516 ORTHO05D000409 5.2e-19 98.2 137 46.7
Dinv44152 Davidia involucrata HOM05D000516 ORTHO05D000409 8.9e-19 97.4 93 58.1
Dinv44174 Davidia involucrata HOM05D000516 ORTHO05D000409 8.9e-19 97.4 93 58.1
Ciclev10020263m.g Citrus clementina HOM05D000516 ORTHO05D000409 2.0e-18 96.3 93 60.2
Duzib268G0214 Durio zibethinus HOM05D000516 ORTHO05D000409 2.0e-18 96.3 145 45.5
Ah.13g073800 Amaranthus hybridus HOM05D000516 ORTHO05D000409 4.4e-18 95.1 93 57.0
CiPaw.02G052300 Carya illinoinensis HOM05D000516 ORTHO05D000409 4.4e-18 95.1 131 48.9
Oeu024476.1 Olea europaea HOM05D000516 ORTHO05D000409 4.4e-18 95.1 141 45.4
Thecc.04G175500 Theobroma cacao HOM05D000516 ORTHO05D000409 4.4e-18 95.1 152 44.7
SGA_v2.0_scaffold12G06169 Striga asiatica HOM05D000516 ORTHO05D000409 7.6e-18 94.4 125 48.8
Nitab4.5_0001586g0120 Nicotiana tabacum HOM05D000516 ORTHO05D000409 9.9e-18 94.0 99 54.5
PGR142G0622 Punica granatum HOM05D000516 ORTHO05D000409 9.9e-18 94.0 93 59.1
MD04G1043600 Malus domestica HOM05D000516 ORTHO05D000409 1.7e-17 93.2 94 57.4
QL10p050736 Quercus lobata HOM05D000516 ORTHO05D000409 1.7e-17 93.2 93 58.1
Actinidia27082 Actinidia chinensis HOM05D000516 ORTHO05D000409 2.2e-17 92.8 99 53.5
Prupe.1G197700 Prunus persica HOM05D000516 ORTHO05D000409 2.2e-17 92.8 146 44.5
Solyc06g053350.3 Solanum lycopersicum HOM05D000516 ORTHO05D000409 3.8e-17 92.0 99 52.5
Sopen06g018410 Solanum pennellii HOM05D000516 ORTHO05D000409 3.8e-17 92.0 99 52.5
Actinidia34585 Actinidia chinensis HOM05D000516 ORTHO05D000409 4.9e-17 91.7 99 52.5
RcHm_v2.0_Chr2g0157441 Rosa chinensis HOM05D000516 ORTHO05D000409 4.9e-17 91.7 100 55.0
MSTRG.9757 Avicennia marina HOM05D000516 ORTHO05D000409 6.4e-17 91.3 93 57.0
DCAR_028432 Daucus carota HOM05D000516 ORTHO05D000409 6.4e-17 91.3 91 54.9
HPP92_002741 Vanilla planifolia HOM05D000516 ORTHO05D000409 6.4e-17 91.3 123 46.3
CAN.G136.21 Capsicum annuum HOM05D000516 ORTHO05D000409 8.4e-17 90.9 96 54.2
Peaxi162Scf00180g00131 Petunia axillaris HOM05D000516 ORTHO05D000409 8.4e-17 90.9 92 56.5
Eucgr.A00102 Eucalyptus grandis HOM05D000516 ORTHO05D000409 1.4e-16 90.1 93 57.0
MD13G1271600 Malus domestica HOM05D000516 ORTHO05D000409 1.4e-16 90.1 99 54.5
FvH4_4g11161 Fragaria vesca HOM05D000516 ORTHO05D000409 1.9e-16 89.7 102 53.9
Manes.11G123600 Manihot esculenta HOM05D000516 ORTHO05D000409 1.9e-16 89.7 93 57.0
Sed0026015 Sechium edule HOM05D000516 ORTHO05D000409 1.9e-16 89.7 135 45.9
Ah.07g202350 Amaranthus hybridus HOM05D000516 ORTHO05D000409 2.4e-16 89.4 148 42.6
Duzib212G0137 Durio zibethinus HOM05D000516 ORTHO05D000409 2.4e-16 89.4 151 43.7
Cfa015191 Carpinus fangiana HOM05D000516 ORTHO05D000409 3.2e-16 89.0 142 45.1
Sed0025172 Sechium edule HOM05D000516 ORTHO05D000409 3.2e-16 89.0 141 46.1
Hund12413 Selenicereus undatus HOM05D000516 ORTHO05D000409 3.2e-16 89.0 93 52.7
unitig_0.g2400 Utricularia gibba HOM05D000516 ORTHO05D000409 3.2e-16 89.0 97 55.7
Atru.chr4.1259 Acer truncatum HOM05D000516 ORTHO05D000409 7.1e-16 87.8 94 56.4
FAN07G1598 Fragaria x ananassa HOM05D000516 ORTHO05D000409 9.3e-16 87.4 104 51.9
HanXRQChr09g0257911 Helianthus annuus HOM05D000516 ORTHO05D000409 9.3e-16 87.4 92 52.2
FAN17G0288 Fragaria x ananassa HOM05D000516 ORTHO05D000409 1.2e-15 87.0 104 52.9
Sed0013754 Sechium edule HOM05D000516 ORTHO05D000409 1.2e-15 87.0 137 46.7
GSVIVG01010836001 Vitis vinifera HOM05D000516 ORTHO05D000409 1.2e-15 87.0 92 55.4
Manes.04G039500 Manihot esculenta HOM05D000516 ORTHO05D000409 2.1e-15 86.3 143 44.1
Nn1g09710 Nelumbo nucifera HOM05D000516 ORTHO05D000409 2.1e-15 86.3 98 51.0
Potri.017G027400 Populus trichocarpa HOM05D000516 ORTHO05D000409 2.7e-15 85.9 93 57.0
FAN22G1058 Fragaria x ananassa HOM05D000516 ORTHO05D000409 4.6e-15 85.1 100 51.0
Gohir.D09G205600 Gossypium hirsutum HOM05D000516 ORTHO05D000409 4.6e-15 85.1 141 43.3
MBI07_g42193_MAGBIO Magnolia biondii HOM05D000516 ORTHO05D000409 4.6e-15 85.1 93 51.6
CiPaw.01G097700 Carya illinoinensis HOM05D000516 ORTHO05D000409 6.0e-15 84.7 86 58.1
CsaV3_3G015850 Cucumis sativus L. HOM05D000516 ORTHO05D000409 6.0e-15 84.7 135 45.2
Gohir.A09G212100 Gossypium hirsutum HOM05D000516 ORTHO05D000409 6.0e-15 84.7 141 42.6
TAR633G1959 Trochodendron aralioides HOM05D000516 ORTHO05D000409 6.0e-15 84.7 94 54.3
arahy.Tifrunner.gnm1.ann1.H0KCEK Arachis hypogaea HOM05D000516 ORTHO05D000409 7.8e-15 84.3 146 41.8
MSTRG.24575 Avicennia marina HOM05D000516 ORTHO05D000409 7.8e-15 84.3 158 39.9
ECA248G0670 Erigeron canadensis HOM05D000516 ORTHO05D000409 7.8e-15 84.3 94 48.9
MBI07_g18518_MAGBIO Magnolia biondii HOM05D000516 ORTHO05D000409 7.8e-15 84.3 93 51.6
Nn7g37592 Nelumbo nucifera HOM05D000516 ORTHO05D000409 7.8e-15 84.3 95 51.6
Gorai.006G229500 Gossypium raimondii HOM05D000516 ORTHO05D000409 1.0e-14 84.0 141 42.6
TWI63G0668 Tripterygium wilfordii HOM05D000516 ORTHO05D000409 1.3e-14 83.6 84 57.1
MELO3C006784.2 Cucumis melo HOM05D000516 ORTHO05D000409 1.7e-14 83.2 93 53.8
Gorai.011G140400 Gossypium raimondii HOM05D000516 ORTHO05D000409 1.7e-14 83.2 138 43.5
Lj3g0002701 Lotus japonicus HOM05D000516 ORTHO05D000409 5.1e-14 81.6 99 51.5
Phvul.005G153900 Phaseolus vulgaris HOM05D000516 ORTHO05D000409 6.6e-14 81.3 104 49.0
Glyma.13G345200 Glycine max HOM05D000516 ORTHO05D000409 8.7e-14 80.9 94 53.2
Glyma.15G029100 Glycine max HOM05D000516 ORTHO05D000409 8.7e-14 80.9 94 52.1
Sp1g04880 Schrenkiella parvula HOM05D000516 ORTHO05D000409 8.7e-14 80.9 93 49.5
ATR0743G138 Amborella trichopoda HOM05D000516 ORTHO05D000409 1.1e-13 80.5 90 48.9
Migut.G01348 Erythranthe guttata HOM05D000516 ORTHO05D000409 1.1e-13 80.5 98 51.0
Cpa.g.sc9.313 Carica papaya HOM05D000516 ORTHO05D000409 1.5e-13 80.1 86 55.8
Glyma.11G126600 Glycine max HOM05D000516 ORTHO05D000409 1.9e-13 79.7 93 52.7
Gohir.D10G127400 Gossypium hirsutum HOM05D000516 ORTHO05D000409 1.9e-13 79.7 138 42.0
THA.LOC104826197 Tarenaya hassleriana HOM05D000516 ORTHO05D000409 1.9e-13 79.7 140 41.4
CDE09G0718 Ceratophyllum demersum HOM05D000516 ORTHO05D000409 2.5e-13 79.3 126 42.9
Thhalv10007692m.g Eutrema salsugineum HOM05D000516 ORTHO05D000409 2.5e-13 79.3 93 49.5
THA.LOC104800891 Tarenaya hassleriana HOM05D000516 ORTHO05D000409 2.5e-13 79.3 94 53.2
VMungo1080G0868 Vigna mungo HOM05D000516 ORTHO05D000409 3.3e-13 79.0 99 49.5
Gohir.A10G139500 Gossypium hirsutum HOM05D000516 ORTHO05D000409 4.3e-13 78.6 144 41.7
Lsat_1_v5_gn_1_77800 Lactuca sativa HOM05D000516 ORTHO05D000409 5.6e-13 78.2 100 46.0
TPR.G18831 Trifolium pratense HOM05D000516 ORTHO05D000409 5.6e-13 78.2 95 53.7
Lalb_Chr22g0352071 Lupinus albus HOM05D000516 ORTHO05D000409 9.6e-13 77.4 97 50.5
ECA238G1236 Erigeron canadensis HOM05D000516 ORTHO05D000409 1.3e-12 77.0 99 46.5
Oeu064765.1 Olea europaea HOM05D000516 ORTHO05D000409 1.3e-12 77.0 98 48.0
Lalb_Chr01g0003111 Lupinus albus HOM05D000516 ORTHO05D000409 2.1e-12 76.3 97 52.6
Medtr2g099050 Medicago truncatula HOM05D000516 ORTHO05D000409 2.1e-12 76.3 98 51.0
Thhalv10016790m.g Eutrema salsugineum HOM05D000516 ORTHO05D000409 3.6e-12 75.5 97 48.5
Sabra07G0106200 Salix brachista HOM05D000516 ORTHO05D000409 4.8e-12 75.1 166 37.3
unitig_52.g17683 Utricularia gibba HOM05D000516 ORTHO05D000409 4.8e-12 75.1 84 54.8
Lalb_Chr14g0372521 Lupinus albus HOM05D000516 ORTHO05D000409 6.2e-12 74.7 94 50.0
MELO3C006794.2 Cucumis melo HOM05D000516 ORTHO05D000409 8.1e-12 74.3 91 50.5
A08p36130 Brassica napus HOM05D000516 ORTHO05D000409 1.1e-11 73.9 93 45.2
Sp4g13850 Schrenkiella parvula HOM05D000516 ORTHO05D000409 1.1e-11 73.9 93 48.4
arahy.Tifrunner.gnm1.ann1.KC1CFT Arachis hypogaea HOM05D000516 ORTHO05D000409 1.4e-11 73.6 102 42.2
Potri.007G130800 Populus trichocarpa HOM05D000516 ORTHO05D000409 1.4e-11 73.6 96 51.0
C08p02380 Brassica napus HOM05D000516 ORTHO05D000409 1.8e-11 73.2 93 47.3
BolC8t47030H Brassica oleracea HOM05D000516 ORTHO05D000409 1.8e-11 73.2 93 47.3
BraA08t35520Z Brassica rapa HOM05D000516 ORTHO05D000409 3.1e-11 72.4 94 44.7
AL1G16020 Arabidopsis lyrata HOM05D000516 ORTHO05D000409 4.0e-11 72.0 90 48.9
CsaV3_3G015960 Cucumis sativus L. HOM05D000516 ORTHO05D000409 4.0e-11 72.0 138 39.1
arahy.Tifrunner.gnm1.ann1.KX9K6H Arachis hypogaea HOM05D000516 ORTHO05D000409 5.3e-11 71.6 93 45.2
arahy.Tifrunner.gnm1.ann1.SPP1BM Arachis hypogaea HOM05D000516 ORTHO05D000409 5.3e-11 71.6 93 45.2
ClCG05G007200 Citrullus lanatus HOM05D000516 ORTHO05D000409 6.9e-11 71.2 139 41.7
Phvul.011G053500 Phaseolus vulgaris HOM05D000516 ORTHO05D000409 6.9e-11 71.2 92 50.0
Carub.0001s0540 Capsella rubella HOM05D000516 ORTHO05D000409 9.0e-11 70.9 88 48.9
Lj3C32T10 Lonicera japonica HOM05D000516 ORTHO05D000409 1.2e-10 70.5 67 56.7
Psat5g289760 Pisum sativum HOM05D000516 ORTHO05D000409 1.2e-10 70.5 120 43.3
DCAR_023944 Daucus carota HOM05D000516 ORTHO05D000409 1.5e-10 70.1 80 52.5
Lalb_Chr19g0138381 Lupinus albus HOM05D000516 ORTHO05D000409 1.5e-10 70.1 93 50.5
VMungo1127G2098 Vigna mungo HOM05D000516 ORTHO05D000409 1.5e-10 70.1 88 48.9
A05p14230 Brassica napus HOM05D000516 ORTHO05D000409 2.0e-10 69.7 94 44.7
Carub.0004s1269 Capsella rubella HOM05D000516 ORTHO05D000409 2.0e-10 69.7 94 46.8
Aa31LG5G5580 Aethionema arabicum HOM05D000516 ORTHO05D000409 3.4e-10 68.9 93 47.3
arahy.Tifrunner.gnm1.ann1.RZ4L5S Arachis hypogaea HOM05D000516 ORTHO05D000409 3.4e-10 68.9 93 44.1
Lalb_Chr24g0396771 Lupinus albus HOM05D000516 ORTHO05D000409 3.4e-10 68.9 94 48.9
AL4G26620 Arabidopsis lyrata HOM05D000516 ORTHO05D000409 4.4e-10 68.6 93 46.2
AT2G31370 Arabidopsis thaliana HOM05D000516 ORTHO05D000409 5.8e-10 68.2 94 45.7
CARHR005590 Cardamine hirsuta HOM05D000516 ORTHO05D000409 5.8e-10 68.2 88 46.6
C04p18960 Brassica napus HOM05D000516 ORTHO05D000409 7.6e-10 67.8 93 44.1
BolC4t23426H Brassica oleracea HOM05D000516 ORTHO05D000409 7.6e-10 67.8 93 44.1
A10p04690 Brassica napus HOM05D000516 ORTHO05D000409 1.3e-09 67.0 96 45.8
BraA10t42733Z Brassica rapa HOM05D000516 ORTHO05D000409 1.3e-09 67.0 96 45.8
CARHR125000 Cardamine hirsuta HOM05D000516 ORTHO05D000409 3.8e-09 65.5 88 47.7
Lsat_1_v5_gn_2_38660 Lactuca sativa HOM05D000516 ORTHO05D000409 3.8e-09 65.5 92 47.8
BraA05t20354Z Brassica rapa HOM05D000516 ORTHO05D000409 6.4e-09 64.7 94 42.6
Aqoxy2G04127 Aquilegia oxysepala HOM05D000516 ORTHO05D000409 1.1e-08 63.9 93 41.9
AT1G06070 Arabidopsis thaliana HOM05D000516 ORTHO05D000409 1.4e-08 63.5 88 47.7
MD04G1043500 Malus domestica HOM05D000516 ORTHO05D000409 1.4e-08 63.5 89 44.9
TWI38G0634 Tripterygium wilfordii HOM05D000516 ORTHO05D000409 1.9e-08 63.2 135 37.0
BcaC02g11237 Brassica carinata HOM05D000516 ORTHO05D000409 2.4e-08 62.8 96 42.7
SEGI_20718 Sequoiadendron giganteum HOM05D000516 ORTHO05D000409 3.2e-08 62.4 95 44.2
BcaC05g24312 Brassica carinata HOM05D000516 ORTHO05D000409 4.2e-08 62.0 91 45.1
C05p04350 Brassica napus HOM05D000516 ORTHO05D000409 4.2e-08 62.0 91 45.1
BolC5t29209H Brassica oleracea HOM05D000516 ORTHO05D000409 4.2e-08 62.0 91 45.1
PSO017G4163 Papaver somniferum HOM05D000516 ORTHO05D000409 5.4e-08 61.6 87 46.0
PSO675G7628 Papaver somniferum HOM05D000516 ORTHO05D000409 1.0e-06 57.4 87 43.7
TAR365G0470 Trochodendron aralioides HOM05D000516 ORTHO05D000409 2.3e-06 56.2 58 53.4
Lsat_1_v5_gn_5_71180 Lactuca sativa HOM05D000516 ORTHO05D000409 3.0e-06 55.8 52 57.7
Eucgr.H00344 Eucalyptus grandis HOM05D000516 ORTHO05D000409 8.7e-06 54.3 113 34.5


User provided reference genes

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