Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 9.3e-100 367.1 213 100.0
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 5.1e-58 228.4 142 85.9
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 5.7e-41 171.8 133 66.9
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 1.7e-40 170.2 133 66.2
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 3.7e-40 169.1 133 64.7
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 4.8e-40 168.7 133 64.7
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 3.1e-39 166.0 132 65.9
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 9.1e-39 164.5 124 66.1
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 9.1e-39 164.5 132 65.2
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 1.6e-38 163.7 132 64.4
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 4.5e-38 162.2 135 63.7
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 1.3e-37 160.6 136 64.0
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 1.7e-37 160.2 130 64.6
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 5.0e-37 158.7 132 63.6
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 6.5e-37 158.3 135 62.2
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 6.5e-37 158.3 132 62.9
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 1.1e-36 157.5 133 63.9
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.5e-36 157.1 132 62.1
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 2.5e-36 156.4 130 62.3
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 5.5e-36 155.2 149 58.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 9.4e-36 154.5 132 62.1
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 9.4e-36 154.5 132 63.6
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.2e-35 154.1 139 61.9
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 4.7e-35 152.1 131 61.8
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 4.7e-35 152.1 131 64.9
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 8.0e-35 151.4 124 66.1
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 8.0e-35 151.4 138 60.1
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 1.4e-34 150.6 131 64.9
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.8e-34 150.2 123 65.9
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.8e-34 150.2 132 62.1
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 4.0e-34 149.1 131 61.1
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 6.8e-34 148.3 131 63.4
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 1.5e-33 147.1 133 58.6
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.5e-33 147.1 122 64.8
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 3.4e-33 146.0 132 59.8
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 4.4e-33 145.6 131 63.4
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 5.7e-33 145.2 132 57.6
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 5.7e-33 145.2 132 57.6
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 5.7e-33 145.2 167 53.3
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 5.7e-33 145.2 167 53.3
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 5.7e-33 145.2 133 60.2
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 7.5e-33 144.8 130 63.1
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 1.7e-32 143.7 126 64.3
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 1.7e-32 143.7 126 64.3
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.7e-32 143.7 132 56.8
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 1.7e-32 143.7 132 57.6
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 2.2e-32 143.3 123 63.4
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 2.8e-32 142.9 130 59.2
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 3.7e-32 142.5 119 64.7
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 3.7e-32 142.5 176 51.7
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 3.7e-32 142.5 132 59.1
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 4.9e-32 142.1 138 59.4
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 6.3e-32 141.7 132 56.1
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 6.3e-32 141.7 176 51.1
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 6.3e-32 141.7 134 58.2
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 6.3e-32 141.7 131 62.6
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.1e-31 141.0 133 59.4
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 1.1e-31 141.0 134 60.4
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 1.4e-31 140.6 132 62.1
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 2.4e-31 139.8 123 63.4
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 2.4e-31 139.8 131 61.8
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 4.1e-31 139.0 133 60.2
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 4.1e-31 139.0 126 61.9
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 4.1e-31 139.0 126 61.9
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 1.2e-30 137.5 145 56.6
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 2.0e-30 136.7 130 56.9
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 4.5e-30 135.6 132 58.3
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 5.9e-30 135.2 133 57.1
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.7e-29 133.7 141 54.6
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 2.9e-29 132.9 133 55.6
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.8e-29 132.5 122 60.7
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 1.9e-28 130.2 115 64.3
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 2.5e-28 129.8 124 58.9
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 3.3e-28 129.4 158 53.2
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 3.3e-28 129.4 131 57.3
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 4.3e-28 129.0 133 54.1
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 9.5e-28 127.9 132 56.1
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 9.5e-28 127.9 127 54.3
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.1e-27 126.7 140 52.1
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 8.0e-27 124.8 141 51.1
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.4e-26 124.0 144 49.3
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 2.3e-26 123.2 141 50.4
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 3.0e-26 122.9 141 50.4
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 4.0e-26 122.5 129 55.8
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 5.2e-26 122.1 120 56.7
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 3.4e-25 119.4 129 54.3
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 4.4e-25 119.0 139 49.6
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.3e-24 117.5 117 56.4
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.8e-23 113.6 105 61.9
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 2.0e-22 110.2 128 51.6
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 2.7e-22 109.8 152 44.7
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 3.5e-22 109.4 142 50.7
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 4.6e-22 109.0 101 61.4
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 4.6e-22 109.0 133 51.9
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 5.9e-22 108.6 130 48.5
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.0e-21 107.8 148 44.6
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 2.3e-21 106.7 124 51.6
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 5.0e-21 105.5 133 50.4
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 6.6e-21 105.1 100 62.0
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 7.3e-20 101.7 67 79.1
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 3.6e-19 99.4 131 48.9
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 3.1e-18 96.3 92 58.7
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 2.6e-17 93.2 162 43.8
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 4.1e-15 85.9 128 44.5
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 2.0e-14 83.6 109 50.5
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 2.0e-14 83.6 105 52.4
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 3.5e-14 82.8 127 46.5
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 7.8e-14 81.6 110 50.0
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 5.0e-13 79.0 106 48.1
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 1.1e-12 77.8 108 46.3
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 2.5e-12 76.6 114 44.7
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 3.3e-12 76.3 112 49.1
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 3.3e-12 76.3 93 50.5
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 1.2e-11 74.3 114 46.5
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 1.2e-11 74.3 114 46.5
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 1.6e-11 73.9 112 48.2
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 1.6e-11 73.9 106 44.3
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 2.1e-11 73.6 100 51.0
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 3.4e-09 66.2 113 38.9
Oeu058808.1 Olea europaea HOM05D001085 ORTHO05D000895 4.4e-09 65.9 47 78.7


User provided reference genes

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