Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022320.1 Olea europaea HOM05D005185 ORTHO05D006075 4.9e-44 180.6 84 100.0
Hma1.2p1_0611F.1_g188600 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 3.6e-39 164.5 83 90.4
Hma1.2p1_0611F.1_g188610 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 3.6e-39 164.5 83 90.4
Hma1.2p1_0651F.1_g195823 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 3.6e-39 164.5 83 90.4
Hma1.2p1_0651F.1_g195826 Hydrangea macrophylla HOM05D005185 ORTHO05D006075 3.6e-39 164.5 83 90.4
SGA_v2.0_scaffold75G24798 Striga asiatica HOM05D005185 ORTHO05D006075 6.1e-39 163.7 83 88.0
Manes.09G060500 Manihot esculenta HOM05D005185 ORTHO05D006075 1.8e-38 162.2 83 89.2
TPR.G5654 Trifolium pratense HOM05D005185 ORTHO05D006075 1.8e-38 162.2 83 88.0
arahy.Tifrunner.gnm1.ann1.81LQDK Arachis hypogaea HOM05D005185 ORTHO05D006075 2.3e-38 161.8 83 89.2
arahy.Tifrunner.gnm1.ann1.C1A3DY Arachis hypogaea HOM05D005185 ORTHO05D006075 2.3e-38 161.8 83 89.2
CsaV3_3G036770 Cucumis sativus L. HOM05D005185 ORTHO05D006075 3.0e-38 161.4 83 86.7
Dinv21262 Davidia involucrata HOM05D005185 ORTHO05D006075 3.0e-38 161.4 83 90.4
Potri.006G116200 Populus trichocarpa HOM05D005185 ORTHO05D006075 3.0e-38 161.4 83 88.0
MSTRG.19227 Avicennia marina HOM05D005185 ORTHO05D006075 4.0e-38 161.0 83 89.2
Medtr1g061240 Medicago truncatula HOM05D005185 ORTHO05D006075 5.2e-38 160.6 83 88.0
Thecc.05G080500 Theobroma cacao HOM05D005185 ORTHO05D006075 5.2e-38 160.6 83 88.0
HanXRQChr02g0052331 Helianthus annuus HOM05D005185 ORTHO05D006075 6.8e-38 160.2 83 86.7
Rhsim03G0081600 Rhododendron simsii HOM05D005185 ORTHO05D006075 6.8e-38 160.2 83 89.2
ClCG10G019410 Citrullus lanatus HOM05D005185 ORTHO05D006075 8.9e-38 159.8 83 85.5
Duzib093G0601 Durio zibethinus HOM05D005185 ORTHO05D006075 8.9e-38 159.8 83 86.7
ECA233G3076 Erigeron canadensis HOM05D005185 ORTHO05D006075 8.9e-38 159.8 83 85.5
Migut.J00988 Erythranthe guttata HOM05D005185 ORTHO05D006075 8.9e-38 159.8 83 88.0
Nn2g13992 Nelumbo nucifera HOM05D005185 ORTHO05D006075 8.9e-38 159.8 83 89.2
Sed0010777 Sechium edule HOM05D005185 ORTHO05D006075 8.9e-38 159.8 83 85.5
MELO3C009431.2 Cucumis melo HOM05D005185 ORTHO05D006075 1.2e-37 159.5 83 84.3
SalBow6G2903 Salvia bowleyana HOM05D005185 ORTHO05D006075 1.2e-37 159.5 83 85.5
SalBow8G3620 Salvia bowleyana HOM05D005185 ORTHO05D006075 1.2e-37 159.5 83 85.5
arahy.Tifrunner.gnm1.ann1.56JAE5 Arachis hypogaea HOM05D005185 ORTHO05D006075 1.5e-37 159.1 83 86.7
CANSAT80G0751 Cannabis sativa HOM05D005185 ORTHO05D006075 1.5e-37 159.1 83 86.7
Gohir.A01G209400 Gossypium hirsutum HOM05D005185 ORTHO05D006075 1.5e-37 159.1 83 86.7
Gorai.002G242700 Gossypium raimondii HOM05D005185 ORTHO05D006075 1.5e-37 159.1 83 86.7
Psat6g078920 Pisum sativum HOM05D005185 ORTHO05D006075 1.5e-37 159.1 84 84.5
PGR004G1028 Punica granatum HOM05D005185 ORTHO05D006075 1.5e-37 159.1 83 86.7
GSVIVG01033776001 Vitis vinifera HOM05D005185 ORTHO05D006075 2.0e-37 158.7 83 85.5
CiPaw.09G008300 Carya illinoinensis HOM05D005185 ORTHO05D006075 2.6e-37 158.3 83 86.7
Lalb_Chr02g0155121 Lupinus albus HOM05D005185 ORTHO05D006075 2.6e-37 158.3 83 86.7
Dinv19825 Davidia involucrata HOM05D005185 ORTHO05D006075 3.4e-37 157.9 83 88.0
TWI77G0453 Tripterygium wilfordii HOM05D005185 ORTHO05D006075 3.4e-37 157.9 83 86.7
Atru.chr8.1640 Acer truncatum HOM05D005185 ORTHO05D006075 4.4e-37 157.5 83 84.3
vmacro07366 Vaccinium macrocarpon HOM05D005185 ORTHO05D006075 4.4e-37 157.5 82 90.2
Cpa.g.sc599.2 Carica papaya HOM05D005185 ORTHO05D006075 5.7e-37 157.1 83 85.5
Cfa016531 Carpinus fangiana HOM05D005185 ORTHO05D006075 5.7e-37 157.1 83 86.7
AUR62033583 Chenopodium quinoa HOM05D005185 ORTHO05D006075 5.7e-37 157.1 83 84.3
Lj5g0000259 Lotus japonicus HOM05D005185 ORTHO05D006075 7.5e-37 156.8 83 84.3
Ca_11622_v3 Cicer arietinum L. HOM05D005185 ORTHO05D006075 9.8e-37 156.4 83 84.3
Phvul.007G223700 Phaseolus vulgaris HOM05D005185 ORTHO05D006075 9.8e-37 156.4 83 84.3
VMungo0720G0877 Vigna mungo HOM05D005185 ORTHO05D006075 9.8e-37 156.4 83 84.3
Atru.chr8.940 Acer truncatum HOM05D005185 ORTHO05D006075 1.3e-36 156.0 83 85.5
AUR62041416 Chenopodium quinoa HOM05D005185 ORTHO05D006075 1.3e-36 156.0 83 83.1
THA.LOC104805104 Tarenaya hassleriana HOM05D005185 ORTHO05D006075 1.3e-36 156.0 83 84.3
arahy.Tifrunner.gnm1.ann1.86F40W Arachis hypogaea HOM05D005185 ORTHO05D006075 2.2e-36 155.2 83 84.3
CSS0036820 Camellia sinensis var. sinensis HOM05D005185 ORTHO05D006075 2.2e-36 155.2 83 88.0
Glyma.13G150900 Glycine max HOM05D005185 ORTHO05D006075 2.9e-36 154.8 83 84.3
Solyc09g009040.3 Solanum lycopersicum HOM05D005185 ORTHO05D006075 2.9e-36 154.8 83 86.7
TWI53G0558 Tripterygium wilfordii HOM05D005185 ORTHO05D006075 2.9e-36 154.8 83 85.5
TAR623G0074 Trochodendron aralioides HOM05D005185 ORTHO05D006075 2.9e-36 154.8 83 86.7
Aqoxy1G00943 Aquilegia oxysepala HOM05D005185 ORTHO05D006075 3.7e-36 154.5 83 85.5
Gohir.D01G198500 Gossypium hirsutum HOM05D005185 ORTHO05D006075 3.7e-36 154.5 83 83.1
Prupe.7G118200 Prunus persica HOM05D005185 ORTHO05D006075 3.7e-36 154.5 83 85.5
Duzib128G1524 Durio zibethinus HOM05D005185 ORTHO05D006075 4.9e-36 154.1 83 81.9
Sopen09g003770 Solanum pennellii HOM05D005185 ORTHO05D006075 4.9e-36 154.1 83 86.7
PGSC0003DMG400002720 Solanum tuberosum HOM05D005185 ORTHO05D006075 4.9e-36 154.1 83 86.7
Prupe.8G104900 Prunus persica HOM05D005185 ORTHO05D006075 6.4e-36 153.7 83 85.5
EL10Ac7g16996 Beta vulgaris HOM05D005185 ORTHO05D006075 8.3e-36 153.3 83 83.1
Ciclev10012005m.g Citrus clementina HOM05D005185 ORTHO05D006075 8.3e-36 153.3 83 83.1
Lsat_1_v5_gn_2_16021 Lactuca sativa HOM05D005185 ORTHO05D006075 1.1e-35 152.9 80 86.2
CARHR162820 Cardamine hirsuta HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 80.7
Eucgr.A01551 Eucalyptus grandis HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 83.1
Eucgr.E00489 Eucalyptus grandis HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 81.9
FvH4_6g17830 Fragaria vesca HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 83.1
Glyma.10G065702 Glycine max HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 83.1
MD14G1015200 Malus domestica HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 84.3
QL07p040641 Quercus lobata HOM05D005185 ORTHO05D006075 1.4e-35 152.5 83 83.1
Thhalv10010464m.g Eutrema salsugineum HOM05D005185 ORTHO05D006075 2.4e-35 151.8 83 79.5
AL5G33730 Arabidopsis lyrata HOM05D005185 ORTHO05D006075 3.2e-35 151.4 83 79.5
MD12G1017500 Malus domestica HOM05D005185 ORTHO05D006075 3.2e-35 151.4 83 81.9
A07p21330 Brassica napus HOM05D005185 ORTHO05D006075 4.1e-35 151.0 83 79.5
RcHm_v2.0_Chr3g0472081 Rosa chinensis HOM05D005185 ORTHO05D006075 4.1e-35 151.0 83 81.9
Sp5g09390 Schrenkiella parvula HOM05D005185 ORTHO05D006075 4.1e-35 151.0 83 79.5
MBI17_g11100_MAGBIO Magnolia biondii HOM05D005185 ORTHO05D006075 5.4e-35 150.6 83 85.5
BcaC08g44614 Brassica carinata HOM05D005185 ORTHO05D006075 7.0e-35 150.2 83 79.5
ATR0820G212 Amborella trichopoda HOM05D005185 ORTHO05D006075 9.2e-35 149.8 83 83.1
AT3G52940 Arabidopsis thaliana HOM05D005185 ORTHO05D006075 1.2e-34 149.4 83 78.3
BcaC02g09201 Brassica carinata HOM05D005185 ORTHO05D006075 1.2e-34 149.4 83 79.5
A04p06560 Brassica napus HOM05D005185 ORTHO05D006075 1.2e-34 149.4 83 78.3
C04p40000 Brassica napus HOM05D005185 ORTHO05D006075 1.6e-34 149.1 83 78.3
CDE02G3234 Ceratophyllum demersum HOM05D005185 ORTHO05D006075 1.6e-34 149.1 83 79.5
PSO339G1354 Papaver somniferum HOM05D005185 ORTHO05D006075 1.6e-34 149.1 83 81.9
arahy.Tifrunner.gnm1.ann1.A5J8ZR Arachis hypogaea HOM05D005185 ORTHO05D006075 2.7e-34 148.3 82 82.9
COL.COLO4_29821 Corchorus olitorius HOM05D005185 ORTHO05D006075 3.5e-34 147.9 100 72.0
Carub.0005s1942 Capsella rubella HOM05D005185 ORTHO05D006075 4.6e-34 147.5 84 78.6
Os09g0565600 Oryza sativa ssp. japonica HOM05D005185 ORTHO05D006075 1.3e-33 146.0 83 74.7
C06p20860 Brassica napus HOM05D005185 ORTHO05D006075 3.9e-33 144.4 87 75.9
BolC6t37273H Brassica oleracea HOM05D005185 ORTHO05D006075 3.9e-33 144.4 87 75.9
Sc02g0001150 Simmondsia chinensis HOM05D005185 ORTHO05D006075 4.3e-32 141.0 83 77.1
Sabra06G0090800 Salix brachista HOM05D005185 ORTHO05D006075 7.3e-32 140.2 136 54.4
SMO146G0185 Selaginella moellendorffii HOM05D005185 ORTHO05D006075 7.3e-32 140.2 83 72.3
Zm00001eb109520 Zea mays HOM05D005185 ORTHO05D006075 7.3e-32 140.2 83 74.7
Os01g0354200 Oryza sativa ssp. japonica HOM05D005185 ORTHO05D006075 2.1e-31 138.7 83 72.3
arahy.Tifrunner.gnm1.ann1.TDW0BY Arachis hypogaea HOM05D005185 ORTHO05D006075 3.6e-31 137.9 79 81.0
Mapoly0024s0127 Marchantia polymorpha HOM05D005185 ORTHO05D006075 4.7e-31 137.5 83 71.1
AagrBONN_evm.TU.Sc2ySwM_228.4043 Anthoceros agrestis HOM05D005185 ORTHO05D006075 2.3e-30 135.2 83 72.3
unitig_27.g25398 Utricularia gibba HOM05D005185 ORTHO05D006075 9.8e-29 129.8 75 77.3
Haze_19532 Corylus avellana HOM05D005185 ORTHO05D006075 2.2e-28 128.6 83 74.7
Nitab4.5_0010922g0020 Nicotiana tabacum HOM05D005185 ORTHO05D006075 3.7e-28 127.9 66 87.9
Thecc.08G186700 Theobroma cacao HOM05D005185 ORTHO05D006075 5.4e-27 124.0 83 67.5
Cc06_g05220 Coffea canephora HOM05D005185 ORTHO05D006075 1.2e-26 122.9 66 81.8
Pp3c16_12420 Physcomitrium patens HOM05D005185 ORTHO05D006075 2.7e-26 121.7 83 66.3
BraA04t16360Z Brassica rapa HOM05D005185 ORTHO05D006075 7.8e-26 120.2 83 68.7
FAN05G4391 Fragaria x ananassa HOM05D005185 ORTHO05D006075 3.0e-25 118.2 66 78.8
FAN09G3384 Fragaria x ananassa HOM05D005185 ORTHO05D006075 3.0e-25 118.2 66 78.8
FAN14G0962 Fragaria x ananassa HOM05D005185 ORTHO05D006075 3.0e-25 118.2 66 78.8
BolC4t25573H Brassica oleracea HOM05D005185 ORTHO05D006075 3.9e-25 117.9 83 67.5
Actinidia11332 Actinidia chinensis HOM05D005185 ORTHO05D006075 5.0e-25 117.5 82 74.4
Aa31LG10G8140 Aethionema arabicum HOM05D005185 ORTHO05D006075 6.6e-25 117.1 66 74.2
Duzib116G0400 Durio zibethinus HOM05D005185 ORTHO05D006075 6.6e-25 117.1 83 61.4
FAN02G1941 Fragaria x ananassa HOM05D005185 ORTHO05D006075 1.5e-24 115.9 66 77.3
Nitab4.5_0001922g0020 Nicotiana tabacum HOM05D005185 ORTHO05D006075 1.9e-24 115.5 87 66.7
BraA07t29820Z Brassica rapa HOM05D005185 ORTHO05D006075 3.3e-24 114.8 83 67.5
SEGI_05693 Sequoiadendron giganteum HOM05D005185 ORTHO05D006075 8.1e-23 110.2 68 70.6
Peaxi162Scf00433g00811 Petunia axillaris HOM05D005185 ORTHO05D006075 1.4e-22 109.4 66 75.8
Lj1C1155T7 Lonicera japonica HOM05D005185 ORTHO05D006075 1.3e-20 102.8 84 66.7
CSS0010850 Camellia sinensis var. sinensis HOM05D005185 ORTHO05D006075 1.1e-19 99.8 70 70.0
FAN05G2920 Fragaria x ananassa HOM05D005185 ORTHO05D006075 1.6e-18 95.9 66 69.7
CBR_g23124 Chara braunii HOM05D005185 ORTHO05D006075 7.8e-18 93.6 65 56.9
HPP92_002061 Vanilla planifolia HOM05D005185 ORTHO05D006075 9.5e-16 86.7 48 77.1
DCAR_013955 Daucus carota HOM05D005185 ORTHO05D006075 8.9e-14 80.1 38 92.1
Hund03537 Selenicereus undatus HOM05D005185 ORTHO05D006075 2.0e-13 79.0 40 85.0
arahy.Tifrunner.gnm1.ann1.51PHKJ Arachis hypogaea HOM05D005185 ORTHO05D006075 1.3e-12 76.3 43 79.1
PSO063G2742 Papaver somniferum HOM05D005185 ORTHO05D006075 4.9e-12 74.3 43 79.1
C08p28220 Brassica napus HOM05D005185 ORTHO05D006075 6.4e-12 73.9 66 57.6
MCO11G332 Micromonas commoda HOM05D001810 ORTHO05D006075 1.3e-09 66.2 87 42.5
PRCOL_00002858 Prasinoderma coloniale HOM05D001810 ORTHO05D006075 2.3e-09 65.5 92 38.0
Cre02.g076800 Chlamydomonas reinhardtii HOM05D001810 ORTHO05D006075 5.6e-08 60.8 92 39.1


User provided reference genes

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