Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 3.8e-151 538.1 263 100.0
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 1.5e-107 393.3 247 76.1
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 4.3e-107 391.7 259 73.0
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 2.8e-106 389.0 259 72.6
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 1.5e-104 383.3 270 70.7
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 5.9e-104 381.3 251 73.3
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 1.9e-102 376.3 251 72.9
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 2.1e-101 372.9 236 77.5
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 1.8e-100 369.8 274 67.5
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.7e-98 363.2 268 68.3
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 2.0e-96 356.3 255 68.2
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 2.0e-96 356.3 274 65.3
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 2.0e-96 356.3 255 69.0
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 3.4e-96 355.5 269 67.3
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 4.5e-96 355.1 273 65.2
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 5.0e-95 351.7 265 67.9
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 5.0e-95 351.7 269 66.5
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 8.5e-95 350.9 254 66.5
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 2.5e-94 349.4 256 67.6
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.2e-93 347.1 271 63.5
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 2.1e-93 346.3 261 64.8
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 3.6e-93 345.5 282 62.4
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 6.1e-93 344.7 271 63.1
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 6.1e-93 344.7 271 63.1
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.4e-92 343.6 254 67.7
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 1.4e-92 343.6 271 62.0
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 3.9e-92 342.0 254 67.3
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 3.9e-92 342.0 249 69.1
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 3.9e-92 342.0 249 69.1
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 3.9e-92 342.0 249 69.1
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 3.9e-92 342.0 249 69.1
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 3.9e-92 342.0 249 69.1
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 5.2e-92 341.7 271 62.7
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 5.2e-92 341.7 272 64.0
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 6.7e-92 341.3 272 62.1
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 1.1e-91 340.5 251 66.5
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 1.1e-91 340.5 262 63.4
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 1.1e-91 340.5 238 69.7
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 2.0e-91 339.7 265 64.5
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.6e-91 339.3 271 62.0
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 2.6e-91 339.3 238 69.3
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 3.3e-91 339.0 280 61.1
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 3.3e-91 339.0 267 63.3
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 3.3e-91 339.0 244 66.4
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 9.7e-91 337.4 239 68.6
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 1.3e-90 337.0 242 66.9
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 1.3e-90 337.0 265 64.2
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 1.7e-90 336.7 268 63.4
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.7e-90 336.7 265 64.2
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 1.7e-90 336.7 241 67.6
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 2.2e-90 336.3 258 64.7
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 2.2e-90 336.3 256 65.2
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 2.8e-90 335.9 249 67.9
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 2.8e-90 335.9 255 64.7
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 3.7e-90 335.5 265 64.5
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 6.3e-90 334.7 258 64.3
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 6.3e-90 334.7 265 65.3
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 1.1e-89 334.0 249 67.1
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 1.4e-89 333.6 238 67.6
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 1.4e-89 333.6 249 67.9
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 1.4e-89 333.6 271 60.9
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 1.8e-89 333.2 240 66.7
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 3.1e-89 332.4 256 66.8
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 3.1e-89 332.4 266 63.2
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 4.1e-89 332.0 266 63.9
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 9.1e-89 330.9 240 68.8
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 1.6e-88 330.1 277 61.0
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 2.6e-88 329.3 273 62.6
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 4.5e-88 328.6 249 63.5
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 5.9e-88 328.2 271 61.6
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 7.7e-88 327.8 254 63.0
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 1.0e-87 327.4 260 61.2
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 1.7e-87 326.6 243 64.2
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 1.7e-87 326.6 271 60.1
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 2.2e-87 326.2 274 60.9
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 2.2e-87 326.2 254 62.2
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 8.5e-87 324.3 271 59.0
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.1e-86 323.9 240 66.7
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 1.5e-86 323.6 246 67.1
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 2.5e-86 322.8 256 64.5
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 4.2e-86 322.0 246 66.7
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 4.2e-86 322.0 246 66.7
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 5.5e-86 321.6 277 60.3
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 5.5e-86 321.6 258 61.2
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 7.2e-86 321.2 260 61.2
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 9.4e-86 320.9 248 62.9
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 9.4e-86 320.9 241 66.0
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 1.2e-85 320.5 240 62.1
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 1.6e-85 320.1 239 65.7
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 6.1e-85 318.2 254 59.8
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 1.8e-84 316.6 259 63.7
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 2.3e-84 316.2 242 63.6
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 2.3e-84 316.2 242 64.0
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 4.0e-84 315.5 254 59.1
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 6.7e-84 314.7 297 56.6
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 9.7e-83 310.8 245 60.4
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 9.7e-83 310.8 252 64.7
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 2.8e-82 309.3 245 61.6
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 2.8e-82 309.3 248 60.5
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 3.7e-82 308.9 250 65.2
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 5.9e-80 301.6 259 57.9
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 3.2e-78 295.8 250 58.8
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 1.6e-77 293.5 251 60.2
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 2.1e-77 293.1 256 57.8
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 1.5e-75 287.0 263 55.5
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 2.0e-75 286.6 259 56.4
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.4e-75 285.8 255 56.5
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 3.4e-75 285.8 255 56.5
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 1.0e-71 274.2 239 57.3
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 6.1e-69 265.0 245 55.9
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 1.4e-68 263.8 253 52.2
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.2e-67 260.8 249 51.4
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 1.7e-66 256.9 243 51.4
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 3.1e-65 252.7 245 54.7
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 7.0e-65 251.5 244 52.0
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 7.0e-65 251.5 260 50.0
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 2.7e-64 249.6 250 49.6
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 2.7e-64 249.6 243 50.2
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 4.7e-61 238.8 249 47.8
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 2.0e-59 233.4 482 33.2
SMO230G0075 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 2.6e-59 233.0 243 45.7
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 4.9e-58 228.8 200 57.5
CiPaw.12G105000 Carya illinoinensis HOM05D004508 ORTHO05D005180 3.3e-54 216.1 211 53.6
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 2.1e-53 213.4 271 42.8
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 5.2e-52 208.8 237 50.2
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 3.7e-50 202.6 250 43.6
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 4.9e-50 202.2 220 51.4
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 8.3e-50 201.4 213 47.4
Gohir.A03G011900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.3e-47 194.1 250 48.8
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 8.6e-47 191.4 141 65.2
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 5.2e-44 182.2 129 64.3
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 1.1e-41 174.5 124 64.5
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 6.6e-39 165.2 127 61.4
BcaC06g34438 Brassica carinata HOM05D004508 ORTHO05D005180 1.1e-38 164.5 122 63.9
BolC7t43385H Brassica oleracea HOM05D004508 ORTHO05D005180 1.5e-38 164.1 121 63.6
PSO017G0573 Papaver somniferum HOM05D004508 ORTHO05D005180 9.5e-38 161.4 123 60.2
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 1.4e-36 157.5 156 55.1
VMungo1215G1224 Vigna mungo HOM05D004508 ORTHO05D005180 6.8e-36 155.2 128 60.9
AUR62017391 Chenopodium quinoa HOM05D004508 ORTHO05D005180 9.2e-33 144.8 109 60.6
CSS0024785 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 1.2e-32 144.4 106 63.2
BolC6t40022H Brassica oleracea HOM05D004508 ORTHO05D005180 2.8e-21 106.7 99 54.5
MELO3C013985.2 Cucumis melo HOM05D004508 ORTHO05D005180 4.8e-21 105.9 69 66.7
BcaC06g35234 Brassica carinata HOM05D004508 ORTHO05D005180 3.4e-19 99.8 69 63.8
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 6.4e-18 95.5 77 57.1
MELO3C021762.2 Cucumis melo HOM05D004508 ORTHO05D005180 2.4e-12 77.0 65 50.8
MCO07G558 Micromonas commoda HOM05D004508 ORTHO05D005180 2.0e-11 73.9 230 29.6
Cre10.g459000 Chlamydomonas reinhardtii HOM05D004508 ORTHO05D005180 5.8e-11 72.4 215 27.4
TPR.G214 Trifolium pratense HOM05D004508 ORTHO05D005180 4.6e-08 62.8 35 71.4
MELO3C035473.2 Cucumis melo HOM05D040713 ORTHO05D005180 3.3e-06 56.6 43 60.5


User provided reference genes

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