Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 9.5e-153 543.5 280 100.0
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 3.3e-97 359.0 271 68.3
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 5.7e-97 358.2 236 74.6
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 3.7e-96 355.5 276 69.2
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 4.8e-96 355.1 273 69.6
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 1.1e-95 354.0 275 68.7
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 2.4e-95 352.8 272 68.8
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 4.1e-95 352.1 280 66.1
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 4.1e-95 352.1 275 68.0
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 1.2e-94 350.5 269 68.8
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 1.2e-94 350.5 277 66.8
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 2.6e-94 349.4 267 67.8
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 2.6e-94 349.4 265 69.1
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 2.6e-94 349.4 265 68.7
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 1.0e-93 347.4 269 68.0
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 1.7e-93 346.7 270 67.8
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 2.9e-93 345.9 282 64.9
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 8.5e-93 344.4 236 75.8
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 8.5e-93 344.4 234 73.5
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 1.1e-92 344.0 262 69.5
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 4.2e-92 342.0 234 74.4
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 5.5e-92 341.7 266 67.7
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 7.2e-92 341.3 250 68.8
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 9.4e-92 340.9 237 73.8
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 9.4e-92 340.9 227 74.9
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 1.6e-91 340.1 294 61.9
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 1.6e-91 340.1 271 67.2
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 2.7e-91 339.3 241 71.4
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.6e-91 338.6 246 69.1
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 6.1e-91 338.2 225 76.0
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 1.4e-90 337.0 234 72.2
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 3.9e-90 335.5 234 73.9
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 8.8e-90 334.3 226 72.6
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 1.1e-89 334.0 260 66.2
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.5e-89 333.6 239 72.0
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.5e-89 333.6 234 73.5
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 1.5e-89 333.6 230 71.7
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.0e-89 333.2 234 72.2
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 2.0e-89 333.2 282 64.5
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 3.3e-89 332.4 237 68.4
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 3.3e-89 332.4 226 71.7
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.3e-89 332.0 234 73.1
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.3e-88 330.5 269 66.9
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 1.7e-88 330.1 266 62.4
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 2.8e-88 329.3 260 65.0
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 2.8e-88 329.3 283 62.5
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 6.3e-88 328.2 276 62.7
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 8.2e-88 327.8 263 66.2
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 8.2e-88 327.8 265 63.0
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 4.1e-87 325.5 234 69.2
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 4.1e-87 325.5 257 63.4
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 5.3e-87 325.1 260 64.2
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 1.5e-86 323.6 244 69.3
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 2.0e-86 323.2 251 66.9
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 3.4e-86 322.4 231 71.9
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 3.4e-86 322.4 266 62.8
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 4.5e-86 322.0 239 69.9
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 4.5e-86 322.0 237 67.5
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 7.7e-86 321.2 234 67.1
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 1.0e-85 320.9 280 61.4
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 1.0e-85 320.9 312 56.7
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 2.9e-85 319.3 234 68.8
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 5.0e-85 318.5 314 57.0
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 6.5e-85 318.2 240 64.6
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 8.5e-85 317.8 233 69.1
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 2.5e-84 316.2 332 54.8
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 3.2e-84 315.8 248 63.3
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 3.2e-84 315.8 237 66.7
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 4.2e-84 315.5 237 65.8
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 5.5e-84 315.1 237 68.8
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 5.5e-84 315.1 231 70.6
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.6e-83 313.5 238 68.9
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 1.6e-83 313.5 248 62.5
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 1.6e-83 313.5 234 68.4
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 2.7e-83 312.8 276 59.1
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 3.6e-83 312.4 273 62.3
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 4.7e-83 312.0 276 59.1
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 4.7e-83 312.0 269 59.5
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 2.3e-82 309.7 272 61.0
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 5.1e-82 308.5 261 62.5
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 6.7e-82 308.1 273 60.1
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 1.1e-81 307.4 272 60.7
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 1.7e-80 303.5 279 59.5
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 5.3e-79 298.5 262 59.2
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 5.3e-79 298.5 223 69.1
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 1.2e-78 297.4 228 65.4
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 4.5e-78 295.4 260 59.2
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 5.9e-78 295.0 272 60.7
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 7.7e-78 294.7 271 59.0
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 1.3e-77 293.9 227 65.6
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 1.7e-77 293.5 270 57.0
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 3.8e-77 292.4 257 59.9
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 6.5e-77 291.6 231 64.1
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 8.5e-77 291.2 227 64.3
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 1.5e-76 290.4 269 58.0
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.9e-76 290.0 233 63.5
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 5.5e-76 288.5 219 64.8
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 7.2e-76 288.1 266 58.3
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 7.2e-76 288.1 249 59.8
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 7.2e-76 288.1 219 68.0
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 9.4e-76 287.7 223 68.6
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.1e-75 286.6 249 60.2
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 6.1e-75 285.0 249 59.4
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 1.8e-74 283.5 279 55.9
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 2.3e-74 283.1 270 56.3
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 2.3e-74 283.1 279 55.9
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 1.1e-73 280.8 195 69.7
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.0e-73 280.0 307 51.1
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 3.3e-73 279.3 229 66.4
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 4.4e-73 278.9 229 61.6
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 9.7e-73 277.7 229 62.0
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 3.7e-72 275.8 268 54.9
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 4.8e-72 275.4 196 69.4
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 4.8e-72 275.4 233 62.7
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 3.5e-70 269.2 279 57.3
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.8e-64 249.6 275 50.9
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 1.1e-63 247.7 195 67.7
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 2.0e-62 243.4 233 55.8
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 3.5e-62 242.7 164 71.3
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.0e-61 241.1 318 46.2
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 1.1e-60 237.7 207 59.4
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 4.2e-60 235.7 270 48.9
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 2.1e-59 233.4 225 54.7
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 3.6e-59 232.6 276 50.0
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 4.7e-59 232.3 247 53.8
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 4.0e-58 229.2 235 54.5
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 6.8e-58 228.4 146 76.0
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.6e-57 226.5 144 75.7
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.4e-57 226.1 271 51.7
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 5.7e-57 225.3 226 50.4
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 2.2e-56 223.4 145 75.2
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 1.0e-53 214.5 149 71.1
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 8.0e-51 204.9 204 56.9
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 2.0e-49 200.3 149 67.1
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.0e-45 188.0 160 60.0
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 3.6e-43 179.5 224 44.6
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 2.0e-41 173.7 142 58.5
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 2.2e-40 170.2 171 50.3
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 7.0e-39 165.2 172 50.0
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 2.3e-37 160.2 93 83.9
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 1.2e-35 154.5 129 59.7
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 3.9e-29 132.9 221 37.6
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.4e-26 124.4 164 47.0
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 6.4e-24 115.5 78 71.8
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 8.4e-24 115.2 92 67.4
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 3.2e-23 113.2 88 64.8
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 5.1e-21 105.9 80 65.0
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 2.5e-20 103.6 245 32.2
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 6.8e-18 95.5 240 30.0
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 5.1e-13 79.3 61 59.0
Lj9A456T33 Lonicera japonica HOM05D004983 ORTHO05D005847 1.2e-06 58.2 53 56.6
Cfa021669 Carpinus fangiana HOM05D004983 ORTHO05D005847 4.6e-06 56.2 188 26.6


User provided reference genes

Program Settings