Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 4.2e-50 201.1 102 100.0
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 2.0e-47 192.2 102 94.1
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 2.2e-46 188.7 101 93.1
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 3.7e-46 188.0 100 92.0
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 3.7e-46 188.0 100 92.0
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.1e-45 186.4 100 91.0
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.4e-45 186.0 100 92.0
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 1.4e-45 186.0 101 91.1
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.1e-45 184.9 102 89.2
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 3.1e-45 184.9 100 90.0
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 4.1e-45 184.5 102 89.2
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 9.1e-45 183.3 100 91.0
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 1.2e-44 183.0 100 89.0
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 1.6e-44 182.6 101 88.1
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 2.0e-44 182.2 102 88.2
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 2.0e-44 182.2 100 88.0
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 3.5e-44 181.4 100 91.0
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 4.5e-44 181.0 100 88.0
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 5.9e-44 180.6 99 89.9
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 5.9e-44 180.6 99 88.9
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 5.9e-44 180.6 100 87.0
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 5.9e-44 180.6 100 89.0
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 5.9e-44 180.6 99 88.9
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 7.7e-44 180.3 102 88.2
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 1.0e-43 179.9 100 88.0
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 1.0e-43 179.9 100 89.0
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 1.0e-43 179.9 100 90.0
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 1.0e-43 179.9 100 90.0
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.0e-43 179.9 101 89.1
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 1.0e-43 179.9 101 89.1
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 1.0e-43 179.9 102 86.3
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.3e-43 179.5 99 87.9
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 1.3e-43 179.5 99 87.9
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 1.3e-43 179.5 99 87.9
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 1.3e-43 179.5 99 87.9
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 1.3e-43 179.5 99 87.9
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 1.3e-43 179.5 99 87.9
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.7e-43 179.1 101 85.1
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 1.7e-43 179.1 102 86.3
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 1.7e-43 179.1 102 87.3
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 1.7e-43 179.1 99 86.9
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 1.7e-43 179.1 99 87.9
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 2.9e-43 178.3 99 86.9
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 2.9e-43 178.3 100 87.0
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.9e-43 178.3 101 85.1
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 2.9e-43 178.3 100 88.0
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 2.9e-43 178.3 101 88.1
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 2.9e-43 178.3 100 86.0
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 3.8e-43 177.9 100 86.0
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 3.8e-43 177.9 100 89.0
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 3.8e-43 177.9 100 87.0
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 3.8e-43 177.9 100 88.0
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 5.0e-43 177.6 101 87.1
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 5.0e-43 177.6 102 87.3
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 5.0e-43 177.6 100 87.0
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 5.0e-43 177.6 100 88.0
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 6.5e-43 177.2 102 85.3
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 8.5e-43 176.8 99 85.9
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 8.5e-43 176.8 101 86.1
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 8.5e-43 176.8 101 88.1
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 8.5e-43 176.8 99 87.9
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.1e-42 176.4 100 87.0
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 1.1e-42 176.4 101 86.1
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 1.5e-42 176.0 103 87.4
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 1.5e-42 176.0 100 82.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 1.5e-42 176.0 101 86.1
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 1.5e-42 176.0 100 84.0
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 1.9e-42 175.6 100 86.0
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 1.9e-42 175.6 103 87.4
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.9e-42 175.6 101 83.2
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.9e-42 175.6 101 83.2
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 2.5e-42 175.3 100 85.0
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.5e-42 175.3 100 85.0
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.5e-42 175.3 100 85.0
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 4.2e-42 174.5 100 87.0
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 4.2e-42 174.5 99 84.8
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 5.5e-42 174.1 100 85.0
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 5.5e-42 174.1 100 84.0
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 7.2e-42 173.7 100 84.0
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 7.2e-42 173.7 100 84.0
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 9.4e-42 173.3 100 85.0
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 1.2e-41 172.9 103 86.4
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 1.2e-41 172.9 103 86.4
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.6e-41 172.6 102 84.3
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.6e-41 172.6 100 84.0
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.6e-41 172.6 100 87.0
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 2.7e-41 171.8 100 85.0
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 6.1e-41 170.6 99 82.8
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 8.0e-41 170.2 100 84.0
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 8.0e-41 170.2 100 84.0
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 1.0e-40 169.9 103 84.5
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.8e-40 169.1 102 82.4
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.8e-40 169.1 102 82.4
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 2.3e-40 168.7 100 83.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.0e-40 168.3 99 81.8
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 3.0e-40 168.3 103 83.5
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 3.0e-40 168.3 99 82.8
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 3.0e-40 168.3 99 81.8
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 6.7e-40 167.2 100 80.0
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 4.4e-39 164.5 99 81.8
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 4.8e-38 161.0 100 82.0
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 8.0e-33 143.7 99 68.7
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 1.4e-32 142.9 78 88.5
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 1.2e-31 139.8 99 66.7
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 1.5e-31 139.4 99 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 4.4e-31 137.9 99 66.7
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 4.1e-29 131.3 71 85.9
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 2.7e-28 128.6 98 60.2
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 3.5e-28 128.3 74 81.1
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 1.2e-23 113.2 63 85.7
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 4.5e-20 101.3 65 80.0
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 1.0e-19 100.1 93 50.5
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 6.1e-17 90.9 74 56.8
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 5.8e-15 84.3 44 88.6
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.7e-14 82.8 59 71.2
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 5.0e-11 71.2 44 72.7
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.9e-10 69.3 41 78.0
AUR62028714 Chenopodium quinoa HOM05D003967 ORTHO05D004531 9.8e-07 57.0 83 31.3
AUR62008132 Chenopodium quinoa HOM05D003967 ORTHO05D004531 2.2e-06 55.8 83 30.1


User provided reference genes

Program Settings