Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022174.1 Olea europaea HOM05D005070 ORTHO05D005987 5.1e-48 194.1 100 100.0
Oeu016348.1 Olea europaea HOM05D005070 ORTHO05D005987 5.2e-37 157.5 100 81.0
MSTRG.4382 Avicennia marina HOM05D005070 ORTHO05D005987 6.8e-37 157.1 100 77.0
MSTRG.9667 Avicennia marina HOM05D005070 ORTHO05D005987 4.4e-36 154.5 100 76.0
Solyc06g073360.3 Solanum lycopersicum HOM05D005070 ORTHO05D005987 2.9e-35 151.8 100 76.0
Sopen06g029740 Solanum pennellii HOM05D005070 ORTHO05D005987 2.9e-35 151.8 100 76.0
Dinv20690 Davidia involucrata HOM05D005070 ORTHO05D005987 3.8e-35 151.4 101 79.2
Migut.D01788 Erythranthe guttata HOM05D005070 ORTHO05D005987 3.8e-35 151.4 100 77.0
Hma1.2p1_1643F.1_g295270 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 1.9e-34 149.1 101 74.3
Hma1.2p1_2351F.1_g320498 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 1.9e-34 149.1 101 74.3
CSS0001011 Camellia sinensis var. sinensis HOM05D005070 ORTHO05D005987 4.2e-34 147.9 94 81.9
Hma1.2p1_0002F.1_g002700 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 4.2e-34 147.9 101 76.2
unitig_0.g791 Utricularia gibba HOM05D005070 ORTHO05D005987 5.4e-34 147.5 100 74.0
GSVIVG01007813001 Vitis vinifera HOM05D005070 ORTHO05D005987 9.2e-34 146.7 99 75.8
Actinidia19084 Actinidia chinensis HOM05D005070 ORTHO05D005987 1.2e-33 146.4 97 78.4
Actinidia33046 Actinidia chinensis HOM05D005070 ORTHO05D005987 1.2e-33 146.4 101 76.2
Dinv09171 Davidia involucrata HOM05D005070 ORTHO05D005987 1.6e-33 146.0 108 75.0
Nitab4.5_0003132g0040 Nicotiana tabacum HOM05D005070 ORTHO05D005987 2.1e-33 145.6 100 72.0
Nitab4.5_0005570g0060 Nicotiana tabacum HOM05D005070 ORTHO05D005987 2.7e-33 145.2 100 73.0
Cc04_g13080 Coffea canephora HOM05D005070 ORTHO05D005987 6.0e-33 144.1 100 72.0
Potri.015G072100 Populus trichocarpa HOM05D005070 ORTHO05D005987 6.6e-32 140.6 103 72.8
CiPaw.12G023900 Carya illinoinensis HOM05D005070 ORTHO05D005987 8.7e-32 140.2 96 72.9
TAR371G1219 Trochodendron aralioides HOM05D005070 ORTHO05D005987 2.5e-31 138.7 96 75.0
TAR629G1223 Trochodendron aralioides HOM05D005070 ORTHO05D005987 7.3e-31 137.1 96 72.9
MD14G1185300 Malus domestica HOM05D005070 ORTHO05D005987 9.6e-31 136.7 96 71.9
Manes.06G101800 Manihot esculenta HOM05D005070 ORTHO05D005987 1.3e-30 136.3 101 73.3
Prupe.5G178000 Prunus persica HOM05D005070 ORTHO05D005987 2.8e-30 135.2 96 70.8
CANSAT80G1974 Cannabis sativa HOM05D005070 ORTHO05D005987 3.6e-30 134.8 98 72.4
CANSAT35G0192 Cannabis sativa HOM05D005070 ORTHO05D005987 8.1e-30 133.7 98 71.4
CSS0038581 Camellia sinensis var. sinensis HOM05D005070 ORTHO05D005987 1.1e-29 133.3 103 69.9
CsaV3_1G001750 Cucumis sativus L. HOM05D005070 ORTHO05D005987 1.1e-29 133.3 95 70.5
Nn3g16981 Nelumbo nucifera HOM05D005070 ORTHO05D005987 1.4e-29 132.9 96 74.0
Sc04g0002050 Simmondsia chinensis HOM05D005070 ORTHO05D005987 1.4e-29 132.9 94 67.0
Atru.chr9.2417 Acer truncatum HOM05D005070 ORTHO05D005987 1.8e-29 132.5 93 69.9
Cfa019078 Carpinus fangiana HOM05D005070 ORTHO05D005987 1.8e-29 132.5 96 68.8
Peaxi162Scf00375g00418 Petunia axillaris HOM05D005070 ORTHO05D005987 1.8e-29 132.5 100 64.0
Lalb_Chr11g0071141 Lupinus albus HOM05D005070 ORTHO05D005987 3.1e-29 131.7 95 70.5
SGA_v2.0_scaffold7G04113 Striga asiatica HOM05D007129 ORTHO05D008680 3.1e-29 131.7 100 66.0
Manes.06G101600 Manihot esculenta HOM05D005070 ORTHO05D005987 5.3e-29 131.0 101 70.3
Ciclev10024649m.g Citrus clementina HOM05D005070 ORTHO05D005987 6.9e-29 130.6 95 71.6
TWI32G1183 Tripterygium wilfordii HOM05D005070 ORTHO05D005987 6.9e-29 130.6 97 70.1
PGR083G2074 Punica granatum HOM05D005070 ORTHO05D005987 9.0e-29 130.2 95 74.7
Sed0009180 Sechium edule HOM05D005070 ORTHO05D005987 9.0e-29 130.2 93 68.8
Eucgr.B00344 Eucalyptus grandis HOM05D005070 ORTHO05D005987 1.2e-28 129.8 99 67.7
Lalb_Chr23g0273091 Lupinus albus HOM05D005070 ORTHO05D005987 1.2e-28 129.8 95 71.6
Nn4g22889 Nelumbo nucifera HOM05D005070 ORTHO05D005987 1.2e-28 129.8 95 68.4
QL10p013399 Quercus lobata HOM05D005070 ORTHO05D005987 1.2e-28 129.8 96 68.8
Thhalv10005150m.g Eutrema salsugineum HOM05D005070 ORTHO05D005987 1.5e-28 129.4 101 66.3
Psat5g113840 Pisum sativum HOM05D005070 ORTHO05D005987 2.0e-28 129.0 95 71.6
Aqoxy3G03084 Aquilegia oxysepala HOM05D005070 ORTHO05D005987 2.6e-28 128.6 95 71.6
arahy.Tifrunner.gnm1.ann1.FI7QKA Arachis hypogaea HOM05D005070 ORTHO05D005987 2.6e-28 128.6 95 69.5
Potri.012G077101 Populus trichocarpa HOM05D005070 ORTHO05D005987 2.6e-28 128.6 102 68.6
THA.LOC104821444 Tarenaya hassleriana HOM05D005070 ORTHO05D005987 2.6e-28 128.6 95 67.4
TWI34G0241 Tripterygium wilfordii HOM05D005070 ORTHO05D005987 2.6e-28 128.6 97 70.1
AT5G62575 Arabidopsis thaliana HOM05D005070 ORTHO05D005987 4.4e-28 127.9 93 71.0
MELO3C017115.2 Cucumis melo HOM05D005070 ORTHO05D005987 4.4e-28 127.9 91 71.4
Medtr3g078310 Medicago truncatula HOM05D005070 ORTHO05D005987 7.6e-28 127.1 92 70.7
CARHR156530 Cardamine hirsuta HOM05D005070 ORTHO05D005987 9.9e-28 126.7 101 65.3
THA.LOC104819433 Tarenaya hassleriana HOM05D005070 ORTHO05D005987 9.9e-28 126.7 89 71.9
Duzib068G0746 Durio zibethinus HOM05D005070 ORTHO05D005987 1.3e-27 126.3 96 68.8
MD06G1180200 Malus domestica HOM05D005070 ORTHO05D005987 1.3e-27 126.3 100 64.0
Hund09411 Selenicereus undatus HOM05D005070 ORTHO05D005987 2.9e-27 125.2 99 63.6
arahy.Tifrunner.gnm1.ann1.LKK6LB Arachis hypogaea HOM05D005070 ORTHO05D005987 3.8e-27 124.8 97 68.0
Ca_16205_v3 Cicer arietinum L. HOM05D000612 ORTHO05D005987 3.8e-27 124.8 96 69.8
Thecc.03G005900 Theobroma cacao HOM05D005070 ORTHO05D005987 8.4e-27 123.6 96 65.6
Carub.0005s1395 Capsella rubella HOM05D005070 ORTHO05D005987 1.4e-26 122.9 93 66.7
Sed0013294 Sechium edule HOM05D005070 ORTHO05D005987 1.4e-26 122.9 93 67.7
Carub.0008s2325 Capsella rubella HOM05D005070 ORTHO05D005987 1.9e-26 122.5 93 68.8
COL.COLO4_04329 Corchorus olitorius HOM05D005070 ORTHO05D005987 3.2e-26 121.7 96 62.5
Thhalv10010853m.g Eutrema salsugineum HOM05D005070 ORTHO05D005987 3.2e-26 121.7 100 62.0
TPR.G15088 Trifolium pratense HOM05D005070 ORTHO05D005987 3.2e-26 121.7 96 66.7
AL5G27130 Arabidopsis lyrata HOM05D005070 ORTHO05D005987 5.4e-26 120.9 92 66.3
RcHm_v2.0_Chr7g0179591 Rosa chinensis HOM05D005070 ORTHO05D005987 5.4e-26 120.9 94 64.9
Duzib205G1171 Durio zibethinus HOM05D005070 ORTHO05D005987 9.3e-26 120.2 96 65.6
HanXRQChr09g0271731 Helianthus annuus HOM05D005070 ORTHO05D005987 9.3e-26 120.2 93 64.5
Phvul.009G149950 Phaseolus vulgaris HOM05D005070 ORTHO05D005987 9.3e-26 120.2 92 65.2
AT3G47833 Arabidopsis thaliana HOM05D005070 ORTHO05D005987 1.6e-25 119.4 92 67.4
Glyma.04G179700 Glycine max HOM05D005070 ORTHO05D005987 1.6e-25 119.4 94 63.8
BcaB02g10688 Brassica carinata HOM05D005070 ORTHO05D005987 2.1e-25 119.0 91 64.8
CARHR276360 Cardamine hirsuta HOM05D005070 ORTHO05D005987 2.7e-25 118.6 92 66.3
Sp2g25760 Schrenkiella parvula HOM05D005070 ORTHO05D005987 3.5e-25 118.2 102 61.8
BcaB01g00872 Brassica carinata HOM05D005070 ORTHO05D005987 6.0e-25 117.5 93 66.7
Lj1g0020478 Lotus japonicus HOM05D005070 ORTHO05D005987 6.0e-25 117.5 94 63.8
TPR.G17706 Trifolium pratense HOM05D005070 ORTHO05D005987 6.0e-25 117.5 95 65.3
Glyma.06G185100 Glycine max HOM05D005070 ORTHO05D005987 7.8e-25 117.1 94 62.8
Gohir.D12G277200 Gossypium hirsutum HOM05D005070 ORTHO05D005987 7.8e-25 117.1 95 63.2
Phvul.009G181300 Phaseolus vulgaris HOM05D005070 ORTHO05D005987 1.3e-24 116.3 95 65.3
Gorai.008G297700 Gossypium raimondii HOM05D005070 ORTHO05D005987 1.7e-24 115.9 96 61.5
A06p19790 Brassica napus HOM05D005070 ORTHO05D005987 3.0e-24 115.2 93 66.7
BraA06t25059Z Brassica rapa HOM05D005070 ORTHO05D005987 3.0e-24 115.2 93 66.7
BcaC01g02293 Brassica carinata HOM05D005070 ORTHO05D005987 3.9e-24 114.8 91 62.6
C03p66960 Brassica napus HOM05D005070 ORTHO05D005987 3.9e-24 114.8 91 62.6
BolC3t18969H Brassica oleracea HOM05D005070 ORTHO05D005987 3.9e-24 114.8 91 62.6
FvH4_5g16500 Fragaria vesca HOM05D005070 ORTHO05D005987 3.9e-24 114.8 95 62.1
FAN04G3047 Fragaria x ananassa HOM05D005070 ORTHO05D005987 3.9e-24 114.8 95 62.1
FAN13G2199 Fragaria x ananassa HOM05D005070 ORTHO05D005987 3.9e-24 114.8 95 62.1
Sabra12G0055200 Salix brachista HOM05D005070 ORTHO05D005987 3.9e-24 114.8 95 64.2
BcaC01g01772 Brassica carinata HOM05D005070 ORTHO05D005987 5.1e-24 114.4 93 65.6
C03p72060 Brassica napus HOM05D005070 ORTHO05D005987 5.1e-24 114.4 93 65.6
FAN18G1077 Fragaria x ananassa HOM05D005070 ORTHO05D005987 5.1e-24 114.4 95 62.1
Lsat_1_v5_gn_4_72681 Lactuca sativa HOM05D005070 ORTHO05D005987 5.1e-24 114.4 101 62.4
Gohir.A12G276360 Gossypium hirsutum HOM05D005070 ORTHO05D005987 8.7e-24 113.6 95 62.1
TAR622G0050 Trochodendron aralioides HOM05D005070 ORTHO05D005987 8.7e-24 113.6 77 71.4
BolC3t19504H Brassica oleracea HOM05D005070 ORTHO05D005987 1.5e-23 112.8 93 64.5
DCAR_031298 Daucus carota HOM05D005070 ORTHO05D005987 1.9e-23 112.5 91 64.8
SalBow3G2397 Salvia bowleyana HOM05D005070 ORTHO05D005987 9.6e-23 110.2 75 70.7
EL10Ac5g10819 Beta vulgaris HOM05D005070 ORTHO05D005987 2.1e-22 109.0 93 55.9
Hma1.2p1_1643F.1_g295260 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 3.6e-22 108.2 77 71.4
Hma1.2p1_2351F.1_g320497 Hydrangea macrophylla HOM05D005070 ORTHO05D005987 3.6e-22 108.2 77 71.4
CDE10G1084 Ceratophyllum demersum HOM05D005070 ORTHO05D005987 6.2e-22 107.5 94 58.5
FAN08G0574 Fragaria x ananassa HOM05D005070 ORTHO05D005987 6.2e-22 107.5 95 58.9
Aa31LG4G16490 Aethionema arabicum HOM05D007129 ORTHO05D008680 1.1e-21 106.7 92 60.9
Rhsim12G0162300 Rhododendron simsii HOM05D005070 ORTHO05D005987 1.8e-21 105.9 138 52.9
MBI02_g26995_MAGBIO Magnolia biondii HOM05D005070 ORTHO05D005987 2.4e-21 105.5 77 67.5
ATR1149G117 Amborella trichopoda HOM05D005070 ORTHO05D005987 9.0e-21 103.6 70 67.1
HanXRQChr16g0503551 Helianthus annuus HOM05D005070 ORTHO05D005987 1.2e-20 103.2 93 60.2
ECA232G1832 Erigeron canadensis HOM05D005070 ORTHO05D005987 5.8e-20 100.9 98 56.1
PGSC0003DMG400027010 Solanum tuberosum HOM05D000366 ORTHO05D001950 1.1e-18 96.7 63 76.2
DCAR_026116 Daucus carota HOM05D000306 ORTHO05D005987 1.9e-18 95.9 78 60.3
arahy.Tifrunner.gnm1.ann1.K5B2QX Arachis hypogaea HOM05D005070 ORTHO05D005987 4.2e-18 94.7 104 53.8
Psat7g153800 Pisum sativum HOM05D005070 ORTHO05D005987 4.2e-18 94.7 77 67.5
AUR62008276 Chenopodium quinoa HOM05D005070 ORTHO05D005987 9.3e-18 93.6 101 49.5
arahy.Tifrunner.gnm1.ann1.HW74CG Arachis hypogaea HOM05D005070 ORTHO05D005987 1.2e-17 93.2 104 51.9
ClCG06G016770 Citrullus lanatus HOM05D005070 ORTHO05D005987 1.2e-17 93.2 75 65.3
Psat7g156680 Pisum sativum HOM05D005070 ORTHO05D005987 2.1e-17 92.4 76 67.1
Haze_07448 Corylus avellana HOM05D005070 ORTHO05D005987 2.7e-17 92.0 78 62.8
CDE10G1207 Ceratophyllum demersum HOM05D005070 ORTHO05D005987 3.5e-17 91.7 85 56.5
Manes.14G069501 Manihot esculenta HOM05D005070 ORTHO05D005987 1.9e-15 85.9 99 52.5
HPP92_017066 Vanilla planifolia HOM05D005070 ORTHO05D005987 1.9e-15 85.9 90 52.2
PSO832G4075 Papaver somniferum HOM05D005070 ORTHO05D005987 6.2e-14 80.9 89 52.8
PSO017G3759 Papaver somniferum HOM05D005070 ORTHO05D005987 1.8e-13 79.3 91 49.5
PSO478G4659 Papaver somniferum HOM05D005070 ORTHO05D005987 3.1e-13 78.6 91 51.6
HPP92_017347 Vanilla planifolia HOM05D005070 ORTHO05D005987 6.9e-13 77.4 61 60.7
C08p19280 Brassica napus HOM05D000130 ORTHO05D000257 1.5e-12 76.3 66 57.6
PSO063G7000 Papaver somniferum HOM05D005070 ORTHO05D005987 1.5e-12 76.3 89 51.7
Zm00001eb098990 Zea mays HOM05D005070 ORTHO05D005987 1.5e-12 76.3 59 64.4
arahy.Tifrunner.gnm1.ann1.67M40U Arachis hypogaea HOM05D005070 ORTHO05D005987 7.6e-12 73.9 55 65.5
BolC8t49547H Brassica oleracea HOM05D000130 ORTHO05D000001 1.3e-11 73.2 64 54.7
Zm00001eb311750 Zea mays HOM05D005070 ORTHO05D005987 2.2e-11 72.4 57 63.2
Os09g0382500 Oryza sativa ssp. japonica HOM05D005070 ORTHO05D005987 4.9e-11 71.2 58 60.3
Mapoly0038s0062 Marchantia polymorpha HOM05D005070 ORTHO05D005987 3.2e-10 68.6 61 55.7
SEGI_14877 Sequoiadendron giganteum HOM05D005070 ORTHO05D005987 5.5e-10 67.8 51 62.7
MBI18_g17201_MAGBIO Magnolia biondii HOM05D002807 ORTHO05D005987 5.1e-08 61.2 54 57.4
AagrBONN_evm.TU.Sc2ySwM_344.5276 Anthoceros agrestis HOM05D005070 ORTHO05D005987 1.6e-06 56.2 66 43.9
CSS0046931 Camellia sinensis var. sinensis HOM05D005070 ORTHO05D005987 1.6e-06 56.2 34 82.4
Pp3c7_6970 Physcomitrium patens HOM05D005070 ORTHO05D005987 1.6e-06 56.2 71 42.3
CBR_g34554 Chara braunii HOM05D005070 ORTHO05D005987 2.8e-06 55.5 46 60.9
MBI03_g02704_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 2.8e-06 55.5 66 47.0
AagrBONN_evm.TU.Sc2ySwM_362.1955 Anthoceros agrestis HOM05D005070 ORTHO05D005987 4.8e-06 54.7 66 40.9


User provided reference genes

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