Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 2.8e-152 542.0 280 100.0
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 2.7e-91 339.3 279 65.6
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 6.1e-91 338.2 274 65.3
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.0e-90 335.9 268 65.7
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 1.7e-88 330.1 281 62.6
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 2.4e-87 326.2 276 65.6
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 4.1e-87 325.5 268 67.2
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 4.1e-87 325.5 268 67.2
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 1.2e-86 323.9 284 65.1
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.0e-86 323.2 283 62.9
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 2.2e-85 319.7 277 63.9
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 2.2e-85 319.7 268 66.4
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 2.9e-85 319.3 269 63.2
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 6.5e-85 318.2 282 62.1
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 3.2e-84 315.8 282 61.7
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 1.6e-83 313.5 261 62.1
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 5.1e-82 308.5 251 63.3
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 1.5e-81 307.0 282 59.6
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 4.1e-79 298.9 283 60.1
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 4.5e-78 295.4 269 61.7
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.2e-77 293.1 268 60.4
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 2.7e-75 286.2 284 57.0
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 2.7e-75 286.2 276 58.7
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.4e-74 283.9 282 56.4
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.8e-74 283.5 283 56.9
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 5.2e-74 282.0 284 57.7
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 3.3e-73 279.3 278 55.8
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 3.3e-73 279.3 270 59.3
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.3e-72 277.3 265 59.6
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.7e-72 275.8 251 59.0
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 6.3e-72 275.0 286 54.9
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 2.4e-71 273.1 280 57.9
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 5.3e-71 271.9 286 54.5
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 7.0e-71 271.6 283 55.8
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.2e-70 270.8 285 58.2
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.2e-70 270.8 286 54.2
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 1.2e-70 270.8 225 66.2
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.5e-70 268.9 280 53.6
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 5.9e-70 268.5 277 56.0
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 7.7e-70 268.1 286 53.5
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.2e-69 266.5 285 53.3
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 2.9e-69 266.2 279 54.1
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 6.5e-69 265.0 280 53.9
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 6.5e-69 265.0 283 55.1
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.5e-68 263.8 260 56.5
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 3.2e-68 262.7 286 53.5
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 5.5e-68 261.9 287 57.5
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 8.0e-67 258.1 278 53.2
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 1.4e-66 257.3 293 54.3
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 3.0e-66 256.1 264 56.4
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 8.8e-66 254.6 292 53.8
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 2.6e-65 253.1 280 52.5
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 3.7e-64 249.2 275 51.3
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 6.3e-64 248.4 287 53.0
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 2.4e-63 246.5 303 55.1
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 2.4e-63 246.5 301 51.5
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 4.1e-63 245.7 272 52.9
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 7.0e-63 245.0 259 56.0
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.2e-62 244.2 277 52.3
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 1.6e-62 243.8 308 53.2
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.7e-62 243.0 271 52.8
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.5e-62 242.7 277 52.3
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 5.9e-62 241.9 277 52.0
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 1.3e-61 240.7 282 51.8
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 2.9e-61 239.6 293 49.8
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 7.2e-60 235.0 279 49.5
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 1.2e-59 234.2 284 47.5
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 1.6e-59 233.8 276 50.0
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 2.7e-59 233.0 280 51.8
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 4.7e-59 232.3 280 51.8
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 6.1e-59 231.9 275 51.3
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.0e-58 231.1 274 50.7
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 1.4e-58 230.7 276 51.1
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 1.4e-58 230.7 340 45.3
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 4.0e-58 229.2 275 50.9
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 5.2e-58 228.8 280 52.1
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 2.6e-57 226.5 239 56.9
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 7.5e-57 224.9 285 50.5
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 2.2e-56 223.4 276 50.4
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.8e-55 220.3 286 47.6
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 2.0e-54 216.9 278 48.6
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 3.5e-54 216.1 275 50.5
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 4.5e-54 215.7 275 48.4
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 1.0e-53 214.5 285 48.1
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 1.5e-52 210.7 273 48.7
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 1.5e-52 210.7 277 47.3
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 5.5e-52 208.8 281 44.8
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 7.2e-52 208.4 281 48.0
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 1.6e-51 207.2 290 46.6
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 1.4e-50 204.1 291 49.5
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 3.0e-50 203.0 279 44.4
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 3.7e-48 196.1 289 47.1
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 4.9e-48 195.7 259 45.9
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 1.8e-47 193.7 272 47.1
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 3.2e-47 193.0 277 45.8
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.7e-46 189.9 290 46.6
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 5.9e-46 188.7 279 43.4
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 2.9e-45 186.4 290 45.5
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 3.9e-45 186.0 291 45.7
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 1.5e-44 184.1 286 45.1
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 1.5e-44 184.1 279 42.3
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 3.6e-43 179.5 292 43.8
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 3.6e-43 179.5 292 41.8
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 6.1e-43 178.7 291 43.3
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 6.1e-43 178.7 288 45.5
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 1.8e-42 177.2 292 43.5
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 1.8e-42 177.2 295 43.1
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 1.8e-42 177.2 292 43.5
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 1.8e-42 177.2 292 43.5
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 1.8e-42 177.2 295 43.1
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 1.8e-42 177.2 164 59.8
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 2.3e-42 176.8 293 44.4
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 4.0e-42 176.0 297 42.4
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 4.0e-42 176.0 279 42.7
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 5.8e-41 172.2 295 42.4
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 5.8e-41 172.2 295 42.4
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 9.8e-41 171.4 279 43.0
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 2.2e-40 170.2 313 37.7
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 2.2e-40 170.2 268 44.0
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 4.9e-40 169.1 282 44.0
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 7.0e-39 165.2 186 54.8
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 3.5e-38 162.9 277 40.8
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 6.0e-38 162.2 239 44.4
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 1.0e-37 161.4 284 40.8
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 2.5e-36 156.8 302 38.4
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 6.8e-34 148.7 259 39.4
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 7.5e-33 145.2 222 44.6
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 1.1e-31 141.4 280 35.7
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 2.4e-31 140.2 241 40.2
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 4.1e-31 139.4 298 37.2
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 2.1e-30 137.1 262 41.6
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 3.9e-29 132.9 235 39.1
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 5.1e-29 132.5 120 61.7
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.5e-28 131.0 251 39.0
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 7.3e-28 128.6 119 60.5
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 1.2e-25 121.3 177 42.9
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 4.9e-24 115.9 140 50.0
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 2.1e-22 110.5 121 53.7
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.7e-21 107.5 263 34.6
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.1e-20 104.8 311 33.4
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.6e-19 100.9 192 37.5
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 8.1e-19 98.6 255 33.7
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 3.8e-16 89.7 58 79.3
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.9e-16 89.4 188 33.0
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.4e-15 87.8 176 35.8
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 9.3e-15 85.1 78 56.4
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 9.6e-12 75.1 94 43.6
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 9.6e-12 75.1 188 32.4
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.1e-10 71.6 188 32.4
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 1.5e-09 67.8 230 27.8
SHI17025 Sapria himalayana HOM05D003929 ORTHO05D004499 8.4e-08 62.0 44 65.9


User provided reference genes

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