Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 1.8e-111 406.0 212 100.0
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 7.7e-46 188.0 220 49.5
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 3.1e-39 166.0 215 48.4
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 4.2e-36 155.6 209 47.4
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 1.2e-35 154.1 210 44.8
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 4.0e-34 149.1 211 44.5
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 2.6e-33 146.4 212 42.5
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 7.5e-33 144.8 219 45.7
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 7.5e-33 144.8 213 42.3
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 9.7e-33 144.4 212 42.0
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 1.7e-32 143.7 214 42.5
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 2.2e-32 143.3 213 43.7
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 2.4e-31 139.8 221 44.8
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 5.9e-30 135.2 217 42.9
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 7.7e-30 134.8 212 37.3
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 7.7e-30 134.8 211 40.3
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 3.8e-29 132.5 228 45.6
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 1.1e-28 131.0 210 38.1
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.9e-28 130.2 217 41.9
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 2.1e-27 126.7 210 41.0
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 2.7e-27 126.3 222 42.3
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 1.4e-26 124.0 211 41.2
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 1.8e-26 123.6 211 42.2
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 2.3e-26 123.2 120 60.0
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 2.8e-24 116.3 158 42.4
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 6.3e-24 115.2 162 46.3
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 6.3e-24 115.2 158 41.8
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 1.1e-23 114.4 215 39.1
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.8e-23 113.6 192 45.3
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 1.8e-23 113.6 224 37.5
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 1.8e-23 113.6 217 39.6
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 1.6e-22 110.5 222 39.2
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.0e-22 110.2 188 39.4
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 2.0e-22 110.2 168 44.6
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 3.5e-22 109.4 212 36.3
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 4.5e-22 109.0 167 42.5
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 4.5e-22 109.0 158 43.0
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 4.5e-22 109.0 200 41.5
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 1.3e-21 107.5 165 44.2
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 3.8e-21 105.9 221 35.3
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 5.0e-21 105.5 208 38.0
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 1.1e-20 104.4 214 36.9
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 1.5e-20 104.0 213 34.7
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 1.5e-20 104.0 220 38.2
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 1.9e-20 103.6 201 37.8
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 3.2e-20 102.8 222 37.4
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 4.2e-20 102.4 201 37.3
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 5.5e-20 102.1 152 43.4
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 1.6e-19 100.5 154 44.2
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 2.7e-19 99.8 140 37.1
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.3e-18 96.7 124 49.2
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 2.3e-18 96.7 211 35.1
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 3.0e-18 96.3 187 38.0
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 4.0e-18 95.9 148 41.9
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 5.2e-18 95.5 214 33.6
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 6.8e-18 95.1 140 36.4
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 6.8e-18 95.1 205 37.1
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 1.2e-17 94.4 119 45.4
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.5e-17 94.0 216 34.3
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 5.7e-17 92.0 149 41.6
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 3.7e-16 89.4 166 34.3
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 3.7e-16 89.4 140 43.6
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 4.9e-16 89.0 165 38.2
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 4.9e-16 89.0 174 37.4
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 6.3e-16 88.6 129 38.0
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 6.3e-16 88.6 215 35.8
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.4e-15 87.4 121 48.8
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 3.1e-15 86.3 217 30.4
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 9.2e-15 84.7 128 46.1
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 5.9e-14 82.0 159 37.1
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 1.3e-13 80.9 176 35.2
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 1.7e-13 80.5 115 48.7
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 2.3e-13 80.1 138 39.1
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 2.9e-13 79.7 185 35.7
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 3.8e-13 79.3 224 31.7
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 1.1e-12 77.8 179 37.4
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 3.3e-12 76.3 64 64.1
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 3.3e-12 76.3 158 38.0
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 9.5e-12 74.7 128 38.3
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.2e-11 74.3 135 36.3
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 1.6e-11 73.9 159 39.0
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.6e-11 72.8 155 31.6
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 3.6e-11 72.8 130 36.9
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 1.8e-10 70.5 146 32.9
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.3e-10 70.1 74 58.1
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 2.3e-10 70.1 184 32.6
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.2e-10 68.9 153 36.6
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 5.2e-10 68.9 134 32.8
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 8.9e-10 68.2 121 33.1
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 8.9e-10 68.2 197 26.9
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 1.2e-09 67.8 93 45.2
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.5e-09 67.4 145 32.4
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 2.0e-09 67.0 133 36.1
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 2.6e-09 66.6 171 32.7
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 2.6e-09 66.6 145 33.1
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 3.4e-09 66.2 112 38.4
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 4.4e-09 65.9 169 26.6
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 4.4e-09 65.9 129 37.2
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 4.4e-09 65.9 121 35.5
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 5.7e-09 65.5 90 51.1
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 5.7e-09 65.5 130 39.2
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 7.5e-09 65.1 158 29.1
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 9.8e-09 64.7 95 41.1
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 1.7e-08 63.9 101 43.6
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 2.2e-08 63.5 159 35.2
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.2e-08 63.5 126 33.3
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 2.9e-08 63.2 137 28.5
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.7e-08 62.8 161 30.4
Actinidia10351 Actinidia chinensis HOM05D007310 ORTHO05D002375 4.9e-08 62.4 98 45.9
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 6.4e-08 62.0 120 30.8
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.4e-08 62.0 141 31.9
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 8.3e-08 61.6 126 32.5
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 8.3e-08 61.6 157 26.8
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 8.3e-08 61.6 157 35.0
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 1.4e-07 60.8 132 34.1
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.4e-07 60.8 141 31.2
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.4e-07 60.8 126 31.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.2e-07 59.7 141 30.5
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.2e-07 59.7 121 32.2
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 4.1e-07 59.3 121 33.1
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 4.1e-07 59.3 136 33.8
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 4.1e-07 59.3 115 40.9
Lsat_1_v5_gn_5_108861 Lactuca sativa HOM05D007310 ORTHO05D002375 5.4e-07 58.9 67 52.2
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 5.4e-07 58.9 161 31.1
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 7.0e-07 58.5 143 31.5
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 9.2e-07 58.2 137 29.2
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 9.2e-07 58.2 122 34.4
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 9.2e-07 58.2 194 28.4
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-06 57.8 177 27.1
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 1.2e-06 57.8 135 31.1
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 1.2e-06 57.8 138 29.0
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 1.2e-06 57.8 138 29.0
ATR0684G111 Amborella trichopoda HOM05D007310 ORTHO05D002375 1.6e-06 57.4 106 42.5
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.6e-06 57.4 130 27.7
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.6e-06 57.4 135 31.1
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 2.0e-06 57.0 147 29.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.0e-06 57.0 141 29.8
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 2.7e-06 56.6 135 28.9
Zm00001eb081280 Zea mays HOM05D021312 ORTHO05D012887 2.7e-06 56.6 141 31.2
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 4.6e-06 55.8 142 27.5
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 4.6e-06 55.8 121 28.1
Ah.01g024090 Amaranthus hybridus HOM05D007310 ORTHO05D002375 5.9e-06 55.5 206 28.6
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 5.9e-06 55.5 96 34.4


User provided reference genes

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