Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022072.1 Olea europaea HOM05D003374 ORTHO05D009415 3.7e-72 274.6 127 100.0
Oeu050858.1 Olea europaea HOM05D003374 ORTHO05D009415 8.1e-67 256.9 127 91.3
CiPaw.13G118300 Carya illinoinensis HOM05D003374 ORTHO05D009415 3.9e-61 238.0 127 83.5
Gorai.003G005800 Gossypium raimondii HOM05D003374 ORTHO05D009415 1.5e-60 236.1 127 82.7
Manes.01G150900 Manihot esculenta HOM05D003374 ORTHO05D009415 1.5e-60 236.1 127 84.3
COL.COLO4_22496 Corchorus olitorius HOM05D003374 ORTHO05D009415 4.3e-60 234.6 127 81.1
Gohir.D03G005400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 4.3e-60 234.6 127 83.5
Duzib147G1310 Durio zibethinus HOM05D003374 ORTHO05D009415 1.2e-59 233.0 127 81.1
Thecc.01G011400 Theobroma cacao HOM05D003374 ORTHO05D009415 1.6e-59 232.6 127 81.1
Ca_24943_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009415 2.1e-59 232.3 124 83.1
CsaV3_3G000500 Cucumis sativus L. HOM05D003374 ORTHO05D009415 2.1e-59 232.3 127 81.1
Duzib147G0846 Durio zibethinus HOM05D003374 ORTHO05D009415 2.1e-59 232.3 127 81.1
Sabra05G0088200 Salix brachista HOM05D003374 ORTHO05D009415 3.6e-59 231.5 127 83.5
Nn6g31909 Nelumbo nucifera HOM05D003374 ORTHO05D009415 4.7e-59 231.1 126 81.0
Potri.005G107700 Populus trichocarpa HOM05D003374 ORTHO05D009415 8.1e-59 230.3 127 84.3
Cpa.g.sc6.314 Carica papaya HOM05D003374 ORTHO05D009415 1.4e-58 229.6 126 78.6
Gohir.A02G174400 Gossypium hirsutum HOM05D003374 ORTHO05D009415 2.4e-58 228.8 127 79.5
TPR.G25106 Trifolium pratense HOM05D003374 ORTHO05D009415 2.4e-58 228.8 124 82.3
Cc07_g11320 Coffea canephora HOM05D003374 ORTHO05D009415 3.1e-58 228.4 127 81.9
Cc08_g04870 Coffea canephora HOM05D003374 ORTHO05D009415 3.1e-58 228.4 127 81.9
Sopen02g028140 Solanum pennellii HOM05D003374 ORTHO05D009415 3.1e-58 228.4 127 79.5
TWI73G0214 Tripterygium wilfordii HOM05D003374 ORTHO05D009415 3.1e-58 228.4 125 80.0
CiPaw.08G125700 Carya illinoinensis HOM05D003374 ORTHO05D009415 4.0e-58 228.0 127 80.3
PGSC0003DMG400003664 Solanum tuberosum HOM05D003374 ORTHO05D009415 5.2e-58 227.6 127 79.5
QL06p052083 Quercus lobata HOM05D003374 ORTHO05D009415 2.0e-57 225.7 124 80.6
Solyc02g083360.1 Solanum lycopersicum HOM05D003374 ORTHO05D009415 2.0e-57 225.7 127 78.0
Lj2g0014685 Lotus japonicus HOM05D003374 ORTHO05D009415 3.4e-57 224.9 125 79.2
Rhsim10G0205600 Rhododendron simsii HOM05D003374 ORTHO05D009415 4.4e-57 224.6 127 78.0
Glyma.11G081000 Glycine max HOM05D003374 ORTHO05D009415 7.6e-57 223.8 124 78.2
Medtr5g022990 Medicago truncatula HOM05D003374 ORTHO05D009415 7.6e-57 223.8 127 76.4
Migut.C00507 Erythranthe guttata HOM05D003374 ORTHO05D009415 1.3e-56 223.0 126 78.6
CAN.G890.27 Capsicum annuum HOM05D003374 ORTHO05D009415 1.7e-56 222.6 127 77.2
Lsat_1_v5_gn_2_75400 Lactuca sativa HOM05D003374 ORTHO05D009415 2.2e-56 222.2 127 79.5
CANSAT25G2243 Cannabis sativa HOM05D003374 ORTHO05D009415 3.8e-56 221.5 127 77.2
GSVIVG01005194001 Vitis vinifera HOM05D003374 ORTHO05D009415 3.8e-56 221.5 123 77.2
Psat2g152000 Pisum sativum HOM05D003374 ORTHO05D009415 6.4e-56 220.7 124 79.0
SGA_v2.0_scaffold16G07586 Striga asiatica HOM05D003374 ORTHO05D009415 1.1e-55 219.9 127 78.7
Phvul.002G104600 Phaseolus vulgaris HOM05D003374 ORTHO05D009415 1.4e-55 219.5 124 76.6
Atru.chr3.908 Acer truncatum HOM05D003374 ORTHO05D009415 1.9e-55 219.2 127 76.4
Ah.03g134290 Amaranthus hybridus HOM05D003374 ORTHO05D009415 2.4e-55 218.8 127 75.6
Eucgr.J02491 Eucalyptus grandis HOM05D003374 ORTHO05D009415 3.2e-55 218.4 127 76.4
Prupe.7G175100 Prunus persica HOM05D003374 ORTHO05D009415 3.2e-55 218.4 122 78.7
THA.LOC104807515 Tarenaya hassleriana HOM05D003374 ORTHO05D009415 9.2e-55 216.9 126 77.8
DCAR_014045 Daucus carota HOM05D003374 ORTHO05D009415 1.2e-54 216.5 126 75.4
Ciclev10026501m.g Citrus clementina HOM05D003374 ORTHO05D009415 1.6e-54 216.1 127 75.6
SalBow7G1184 Salvia bowleyana HOM05D003374 ORTHO05D009415 1.6e-54 216.1 127 75.6
Lalb_Chr05g0212171 Lupinus albus HOM05D003374 ORTHO05D009415 2.1e-54 215.7 124 75.0
MD02G1123500 Malus domestica HOM05D003374 ORTHO05D009415 2.1e-54 215.7 126 75.4
TAR376G1073 Trochodendron aralioides HOM05D003374 ORTHO05D009415 2.1e-54 215.7 127 74.8
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 2.7e-54 215.3 126 75.4
CSS0011665 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 4.6e-54 214.5 127 74.0
Cfa007030 Carpinus fangiana HOM05D003374 ORTHO05D009415 6.0e-54 214.2 123 77.2
Aqoxy6G01987 Aquilegia oxysepala HOM05D003374 ORTHO05D009415 1.7e-53 212.6 127 74.0
Dinv40145 Davidia involucrata HOM05D003374 ORTHO05D009415 3.0e-53 211.8 113 80.5
Nitab4.5_0006892g0030 Nicotiana tabacum HOM05D003374 ORTHO05D009415 8.7e-53 210.3 105 86.7
CSS0020449 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 1.9e-52 209.1 127 72.4
TAR625G1333 Trochodendron aralioides HOM05D003374 ORTHO05D009415 1.9e-52 209.1 121 75.2
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 3.3e-52 208.4 112 80.4
Nitab4.5_0002105g0060 Nicotiana tabacum HOM05D003374 ORTHO05D009415 3.3e-52 208.4 105 84.8
PSO541G5712 Papaver somniferum HOM05D003374 ORTHO05D009415 4.3e-52 208.0 127 71.7
Sc16g0001810 Simmondsia chinensis HOM05D003374 ORTHO05D009415 7.3e-52 207.2 127 71.7
AL3G50700 Arabidopsis lyrata HOM05D003374 ORTHO05D009415 1.6e-51 206.1 125 71.2
BcaC06g36302 Brassica carinata HOM05D003374 ORTHO05D009415 1.6e-51 206.1 125 72.8
HPP92_015019 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.6e-51 206.1 124 75.0
HPP92_028513 Vanilla planifolia HOM05D003374 ORTHO05D009415 1.6e-51 206.1 124 75.0
C07p05590 Brassica napus HOM05D003374 ORTHO05D009415 2.1e-51 205.7 125 72.8
FvH4_1g11071 Fragaria vesca HOM05D003374 ORTHO05D009415 4.7e-51 204.5 126 71.4
AT2G17705 Arabidopsis thaliana HOM05D003374 ORTHO05D009415 6.2e-51 204.1 126 69.8
BcaB03g16543 Brassica carinata HOM05D003374 ORTHO05D009415 6.2e-51 204.1 124 72.6
Thhalv10023081m.g Eutrema salsugineum HOM05D003374 ORTHO05D009415 6.2e-51 204.1 123 73.2
CARHR107990 Cardamine hirsuta HOM05D003374 ORTHO05D009415 8.1e-51 203.8 125 72.0
PSO675G5709 Papaver somniferum HOM05D003374 ORTHO05D009415 1.4e-50 203.0 127 70.9
Sp3g31110 Schrenkiella parvula HOM05D003374 ORTHO05D009415 1.4e-50 203.0 125 72.0
BraA07t28129Z Brassica rapa HOM05D003374 ORTHO05D009415 1.8e-50 202.6 125 72.0
Actinidia22936 Actinidia chinensis HOM05D003374 ORTHO05D009415 9.0e-50 200.3 105 81.0
ATR0661G346 Amborella trichopoda HOM05D003374 ORTHO05D009415 9.0e-50 200.3 120 74.2
Carub.0003s3181 Capsella rubella HOM05D003374 ORTHO05D009415 3.4e-49 198.4 125 69.6
MD15G1237300 Malus domestica HOM05D003374 ORTHO05D009415 1.7e-48 196.1 144 65.3
RcHm_v2.0_Chr2g0098341 Rosa chinensis HOM05D003374 ORTHO05D009415 2.9e-48 195.3 124 69.4
MSTRG.25049 Avicennia marina HOM05D003374 ORTHO05D009415 1.1e-47 193.4 111 74.8
Aa31LG8G14980 Aethionema arabicum HOM05D003374 ORTHO05D009415 2.4e-47 192.2 108 77.8
unitig_26.g9807 Utricularia gibba HOM05D003374 ORTHO05D009415 3.2e-47 191.8 122 69.7
MBI05_g46750_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009415 7.1e-47 190.7 108 75.9
SEGI_17874 Sequoiadendron giganteum HOM05D003374 ORTHO05D009415 1.0e-45 186.8 122 72.1
HanXRQChr14g0442031 Helianthus annuus HOM05D003374 ORTHO05D009415 1.3e-45 186.4 118 69.5
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 5.1e-45 184.5 110 72.7
MELO3C013742.2 Cucumis melo HOM05D003374 ORTHO05D009415 1.5e-44 183.0 99 79.8
Os03g0136500 Oryza sativa ssp. japonica HOM05D003374 ORTHO05D009415 1.9e-44 182.6 123 64.2
Zm00001eb002870 Zea mays HOM05D003374 ORTHO05D009415 6.2e-43 177.6 123 63.4
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 9.9e-41 170.2 103 70.9
Sed0013270 Sechium edule HOM05D003374 ORTHO05D009415 2.9e-40 168.7 99 72.7
AagrBONN_evm.TU.Sc2ySwM_362.2709 Anthoceros agrestis HOM05D003374 ORTHO05D009415 2.1e-38 162.5 116 62.9
SMO013G0010 Selaginella moellendorffii HOM05D003374 ORTHO05D009415 2.5e-36 155.6 118 61.0
AagrBONN_evm.TU.Sc2ySwM_362.2707 Anthoceros agrestis HOM05D003374 ORTHO05D009415 1.4e-34 149.8 116 57.8
Sc16g0001870 Simmondsia chinensis HOM05D003374 ORTHO05D009415 1.8e-34 149.4 89 73.0
Glyma.01G162300 Glycine max HOM05D003374 ORTHO05D009415 9.9e-33 143.7 77 80.5
Pp3c17_11570 Physcomitrium patens HOM05D003374 ORTHO05D009415 2.2e-32 142.5 121 51.2
Pp3c2_13370 Physcomitrium patens HOM05D003374 ORTHO05D009415 3.8e-32 141.7 121 53.7
Pp3c1_28090 Physcomitrium patens HOM05D003374 ORTHO05D009415 1.2e-30 136.7 121 52.1
Mapoly0037s0042 Marchantia polymorpha HOM05D003374 ORTHO05D009415 2.7e-30 135.6 119 52.9
CBR_g80133 Chara braunii HOM05D003374 ORTHO05D009415 3.0e-21 105.5 113 43.4
Actinidia17404 Actinidia chinensis HOM05D003374 ORTHO05D009415 2.2e-19 99.4 100 49.0
SGA_v2.0_scaffold52G18966 Striga asiatica HOM05D003340 ORTHO05D003775 1.3e-11 73.6 128 33.6
Sopen04g027620 Solanum pennellii HOM05D003340 ORTHO05D003775 1.8e-10 69.7 89 40.4
Solyc04g071630.3 Solanum lycopersicum HOM05D003340 ORTHO05D003775 2.4e-10 69.3 126 32.5
Aqoxy6G00217 Aquilegia oxysepala HOM05D003340 ORTHO05D003775 6.9e-10 67.8 126 34.9
Zm00001eb289950 Zea mays HOM05D003340 ORTHO05D003775 6.9e-10 67.8 124 34.7
Nitab4.5_0001187g0040 Nicotiana tabacum HOM05D003340 ORTHO05D003775 9.1e-10 67.4 89 39.3
Nitab4.5_0001344g0050 Nicotiana tabacum HOM05D003340 ORTHO05D003775 9.1e-10 67.4 89 39.3
Sabra05G0057400 Salix brachista HOM05D003340 ORTHO05D003775 1.2e-09 67.0 85 37.6
AUR62006909 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.5e-09 66.6 83 37.3
Nn5g28288 Nelumbo nucifera HOM05D003340 ORTHO05D003775 2.0e-09 66.2 89 37.1
CAN.G264.5 Capsicum annuum HOM05D003340 ORTHO05D003775 2.6e-09 65.9 87 39.1
MSTRG.25383 Avicennia marina HOM05D003340 ORTHO05D003775 3.4e-09 65.5 125 32.0
Potri.005G070600 Populus trichocarpa HOM05D003340 ORTHO05D003775 4.5e-09 65.1 87 35.6
Nn1g08798 Nelumbo nucifera HOM05D003340 ORTHO05D003775 5.9e-09 64.7 88 36.4
Oeu017298.1 Olea europaea HOM05D003340 ORTHO05D003775 5.9e-09 64.7 125 30.4
PGSC0003DMG400006659 Solanum tuberosum HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 37.9
HPP92_013888 Vanilla planifolia HOM05D003340 ORTHO05D003775 7.7e-09 64.3 87 39.1
CSS0046765 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 1.3e-08 63.5 124 31.5
AUR62014338 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.3e-08 63.5 87 39.1
AUR62019080 Chenopodium quinoa HOM05D003340 ORTHO05D003775 1.3e-08 63.5 87 39.1
HPP92_018105 Vanilla planifolia HOM05D003340 ORTHO05D003775 1.3e-08 63.5 88 35.2
Lj4P627T24 Lonicera japonica HOM05D003340 ORTHO05D003775 1.7e-08 63.2 97 35.1
PGR102G2107 Punica granatum HOM05D003340 ORTHO05D003775 1.7e-08 63.2 83 39.8
SalBow7G3799 Salvia bowleyana HOM05D003340 ORTHO05D003775 1.7e-08 63.2 86 38.4
TWI74G0103 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 1.7e-08 63.2 121 30.6
Eucgr.F04352 Eucalyptus grandis HOM05D003340 ORTHO05D003775 2.2e-08 62.8 127 33.1
Lsat_1_v5_gn_1_10021 Lactuca sativa HOM05D003340 ORTHO05D003775 2.2e-08 62.8 87 36.8
SMO119G0032 Selaginella moellendorffii HOM05D003340 ORTHO05D003775 2.9e-08 62.4 86 37.2
HPP92_019003 Vanilla planifolia HOM05D003340 ORTHO05D003775 3.8e-08 62.0 90 35.6
EL10Ac4g09660 Beta vulgaris HOM05D003340 ORTHO05D003775 5.0e-08 61.6 81 35.8
Hund21783 Selenicereus undatus HOM05D003340 ORTHO05D003775 5.0e-08 61.6 86 33.7
Hund26810 Selenicereus undatus HOM05D003340 ORTHO05D003775 6.5e-08 61.2 87 36.8
Ah.06g188530 Amaranthus hybridus HOM05D003340 ORTHO05D003775 8.5e-08 60.8 83 37.3
Gohir.A01G189000 Gossypium hirsutum HOM05D003340 ORTHO05D003775 8.5e-08 60.8 126 31.7
Rhsim06G0103500 Rhododendron simsii HOM05D003340 ORTHO05D003775 8.5e-08 60.8 89 38.2
EL10Ac1g01010 Beta vulgaris HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 36.8
CSS0003781 Camellia sinensis var. sinensis HOM05D003340 ORTHO05D003775 1.1e-07 60.5 123 30.9
Manes.02G163400 Manihot esculenta HOM05D003340 ORTHO05D003775 1.1e-07 60.5 87 36.8
Medtr3g088030 Medicago truncatula HOM05D003340 ORTHO05D003775 1.4e-07 60.1 128 29.7
Os01g0833400 Oryza sativa ssp. japonica HOM05D003340 ORTHO05D003775 1.4e-07 60.1 133 29.3
VMungo1309G0419 Vigna mungo HOM05D003340 ORTHO05D003775 1.4e-07 60.1 128 30.5
Gohir.A05G268800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 37.9
Hund17293 Selenicereus undatus HOM05D003340 ORTHO05D003775 1.9e-07 59.7 87 36.8
TAR381G1109 Trochodendron aralioides HOM05D003340 ORTHO05D003775 1.9e-07 59.7 126 30.2
Dinv07220 Davidia involucrata HOM05D003340 ORTHO05D003775 2.5e-07 59.3 86 36.0
PSO170G4666 Papaver somniferum HOM05D003340 ORTHO05D003775 2.5e-07 59.3 126 31.7
Psat5g087400 Pisum sativum HOM05D003340 ORTHO05D003775 2.5e-07 59.3 126 28.6
Cc10_g11880 Coffea canephora HOM05D003340 ORTHO05D003775 3.2e-07 58.9 123 29.3
FAN15G0091 Fragaria x ananassa HOM05D003340 ORTHO05D003775 3.2e-07 58.9 96 35.4
Gohir.D01G180500 Gossypium hirsutum HOM05D003340 ORTHO05D003775 3.2e-07 58.9 126 31.0
Gorai.002G222100 Gossypium raimondii HOM05D003340 ORTHO05D003775 3.2e-07 58.9 126 31.0
Lalb_Chr10g0101671 Lupinus albus HOM05D003340 ORTHO05D003775 3.2e-07 58.9 124 30.6
Manes.18G077306 Manihot esculenta HOM05D003340 ORTHO05D003775 3.2e-07 58.9 123 30.9
Thecc.08G125400 Theobroma cacao HOM05D003340 ORTHO05D003775 3.2e-07 58.9 87 37.9
Dinv07260 Davidia involucrata HOM05D003340 ORTHO05D003775 4.2e-07 58.5 90 33.3
Gorai.009G283300 Gossypium raimondii HOM05D003340 ORTHO05D003775 4.2e-07 58.5 87 36.8
CANSAT25G3576 Cannabis sativa HOM05D003340 ORTHO05D003775 5.5e-07 58.2 123 29.3
FAN20G1789 Fragaria x ananassa HOM05D003340 ORTHO05D003775 5.5e-07 58.2 96 35.4
Gohir.A06G044800 Gossypium hirsutum HOM05D003340 ORTHO05D003775 5.5e-07 58.2 87 36.8
Mapoly0166s0008 Marchantia polymorpha HOM05D003340 ORTHO05D003775 5.5e-07 58.2 121 29.8
Psat6g041160 Pisum sativum HOM05D003340 ORTHO05D003775 5.5e-07 58.2 126 29.4
MBI11_g05791_MAGBIO Magnolia biondii HOM05D003340 ORTHO05D003775 7.2e-07 57.8 129 31.8
TWI32G0782 Tripterygium wilfordii HOM05D003340 ORTHO05D003775 7.2e-07 57.8 87 36.8
Ah.05g171100 Amaranthus hybridus HOM05D005358 ORTHO05D006384 9.4e-07 57.4 86 38.4
COL.COLO4_36312 Corchorus olitorius HOM05D003340 ORTHO05D003775 9.4e-07 57.4 126 31.0
Duzib093G0952 Durio zibethinus HOM05D003340 ORTHO05D003775 9.4e-07 57.4 123 31.7
Gohir.D05G270700 Gossypium hirsutum HOM05D003340 ORTHO05D003775 9.4e-07 57.4 87 35.6
SGA_v2.0_scaffold120G33021 Striga asiatica HOM05D003340 ORTHO05D003775 9.4e-07 57.4 97 37.1
Cpa.g.sc37.41 Carica papaya HOM05D003340 ORTHO05D003775 1.2e-06 57.0 90 33.3
Glyma.13G079000 Glycine max HOM05D003340 ORTHO05D003775 1.2e-06 57.0 126 30.2
Gohir.D06G045300 Gossypium hirsutum HOM05D003340 ORTHO05D003775 1.2e-06 57.0 87 36.8
Gorai.010G050300 Gossypium raimondii HOM05D003340 ORTHO05D003775 1.2e-06 57.0 87 36.8
QL09p034593 Quercus lobata HOM05D003340 ORTHO05D003775 1.6e-06 56.6 87 36.8
MD15G1348300 Malus domestica HOM05D003340 ORTHO05D003775 2.7e-06 55.8 88 36.4
GSVIVG01022376001 Vitis vinifera HOM05D003340 ORTHO05D003775 2.7e-06 55.8 84 34.5
Migut.N00692 Erythranthe guttata HOM05D003340 ORTHO05D003775 3.6e-06 55.5 91 36.3
Glyma.14G150300 Glycine max HOM05D003340 ORTHO05D003775 3.6e-06 55.5 126 30.2
MD08G1162700 Malus domestica HOM05D003340 ORTHO05D003775 3.6e-06 55.5 88 35.2
Duzib041G0745 Durio zibethinus HOM05D003340 ORTHO05D003775 4.7e-06 55.1 128 31.2
Glyma.06G113100 Glycine max HOM05D003340 ORTHO05D003775 6.1e-06 54.7 87 33.3
Zm00001eb368310 Zea mays HOM05D003340 ORTHO05D003775 6.1e-06 54.7 85 32.9
Nn3g19971 Nelumbo nucifera HOM05D003340 ORTHO05D003775 7.9e-06 54.3 62 37.1
VMungo0647G0885 Vigna mungo HOM05D000654 ORTHO05D002330 7.9e-06 54.3 124 29.8


User provided reference genes

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