Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 2.1e-73 278.9 134 100.0
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 5.9e-44 181.0 125 71.2
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 1.5e-42 176.4 123 68.3
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 1.4e-40 169.9 123 64.2
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 1.5e-39 166.4 121 65.3
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.6e-39 165.6 112 66.1
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 2.6e-39 165.6 111 70.3
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 2.6e-39 165.6 112 66.1
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 3.4e-39 165.2 116 65.5
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 3.4e-39 165.2 122 63.9
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 3.4e-39 165.2 109 66.1
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 4.4e-39 164.9 110 65.5
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 9.8e-39 163.7 119 64.7
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 9.8e-39 163.7 123 65.9
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 9.8e-39 163.7 127 60.6
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 9.8e-39 163.7 116 67.2
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 1.3e-38 163.3 118 64.4
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 1.7e-38 162.9 125 61.6
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.9e-38 162.2 112 65.2
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 2.9e-38 162.2 122 62.3
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 2.9e-38 162.2 120 63.3
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 3.7e-38 161.8 120 61.7
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 6.4e-38 161.0 119 63.9
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 1.1e-37 160.2 96 72.9
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.4e-37 159.8 110 65.5
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 1.4e-37 159.8 110 65.5
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.8e-37 159.5 112 65.2
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.8e-37 159.5 115 67.0
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.4e-37 159.1 115 67.8
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 4.1e-37 158.3 111 65.8
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 7.0e-37 157.5 125 60.8
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 7.0e-37 157.5 120 62.5
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 7.0e-37 157.5 115 66.1
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 9.2e-37 157.1 120 61.7
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 2.0e-36 156.0 120 61.7
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.0e-36 156.0 121 60.3
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 4.6e-36 154.8 109 66.1
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 4.6e-36 154.8 130 60.0
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 5.9e-36 154.5 110 63.6
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 5.9e-36 154.5 124 59.7
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 5.9e-36 154.5 136 57.4
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 7.8e-36 154.1 117 61.5
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 1.0e-35 153.7 117 62.4
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 1.0e-35 153.7 112 64.3
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 1.0e-35 153.7 126 61.9
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 1.0e-35 153.7 120 61.7
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.0e-35 153.7 120 59.2
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.0e-35 153.7 120 59.2
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 1.3e-35 153.3 98 70.4
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 1.7e-35 152.9 123 60.2
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 2.9e-35 152.1 111 62.2
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 2.9e-35 152.1 106 67.9
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 2.9e-35 152.1 114 59.6
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 5.0e-35 151.4 111 61.3
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 5.0e-35 151.4 120 57.5
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 5.0e-35 151.4 114 62.3
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 5.0e-35 151.4 117 62.4
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 5.0e-35 151.4 116 63.8
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 6.6e-35 151.0 111 61.3
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 6.6e-35 151.0 115 62.6
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 6.6e-35 151.0 117 64.1
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 8.6e-35 150.6 123 59.3
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 1.9e-34 149.4 120 58.3
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 1.9e-34 149.4 127 59.8
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 2.5e-34 149.1 111 64.0
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.5e-34 149.1 117 61.5
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.5e-34 149.1 116 62.1
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 2.5e-34 149.1 116 62.1
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 4.3e-34 148.3 114 60.5
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 5.6e-34 147.9 111 63.1
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 5.6e-34 147.9 90 73.3
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 7.3e-34 147.5 116 63.8
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 7.3e-34 147.5 115 63.5
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 7.3e-34 147.5 116 60.3
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 9.5e-34 147.1 111 61.3
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 9.5e-34 147.1 111 62.2
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.2e-33 146.7 116 62.1
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.2e-33 146.7 116 62.1
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 1.2e-33 146.7 111 59.5
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 1.2e-33 146.7 112 62.5
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 1.2e-33 146.7 111 59.5
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 1.2e-33 146.7 124 55.6
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 1.2e-33 146.7 119 58.0
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.2e-33 146.7 113 63.7
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 1.6e-33 146.4 111 59.5
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.6e-33 146.4 113 64.6
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 1.6e-33 146.4 128 53.9
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 2.8e-33 145.6 111 59.5
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 3.6e-33 145.2 111 62.2
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 6.2e-33 144.4 111 58.6
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 6.2e-33 144.4 125 54.4
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 8.0e-33 144.1 120 58.3
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 1.0e-32 143.7 111 61.3
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 1.0e-32 143.7 111 58.6
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 1.4e-32 143.3 111 61.3
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 1.4e-32 143.3 111 60.4
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.4e-32 143.3 112 59.8
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 1.4e-32 143.3 125 52.8
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 1.8e-32 142.9 119 57.1
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 4.0e-32 141.7 111 60.4
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 4.0e-32 141.7 111 60.4
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 6.8e-32 141.0 125 53.6
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 8.9e-32 140.6 109 58.7
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 1.2e-31 140.2 125 56.0
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.5e-31 139.8 83 71.1
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.4e-31 138.7 112 58.9
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 1.3e-30 136.7 122 54.1
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.3e-30 136.7 137 51.1
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 2.2e-30 136.0 122 53.3
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 3.7e-30 135.2 117 56.4
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 4.9e-30 134.8 78 74.4
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 6.4e-30 134.4 116 54.3
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 6.0e-28 127.9 89 60.7
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.8e-24 116.3 122 45.1
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 2.3e-24 115.9 90 53.3
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.9e-24 114.0 86 58.1
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.9e-24 114.0 86 58.1
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 3.4e-23 112.1 82 57.3
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 7.5e-23 110.9 103 50.5
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 6.4e-22 107.8 84 54.8
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.1e-21 107.1 119 42.9
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 4.1e-21 105.1 109 42.2
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.1e-21 105.1 122 45.1
SEGI_08036 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 8.6e-19 97.4 108 47.2
Zm00001eb121890 Zea mays HOM05D005543 ORTHO05D006584 1.2e-15 87.0 93 43.0
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 2.2e-14 82.8 130 42.3
Mapoly0005s0207 Marchantia polymorpha HOM05D005543 ORTHO05D006584 3.2e-13 79.0 86 39.5
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 1.0e-11 73.9 73 47.9
Pp3c1_40160 Physcomitrium patens HOM05D005543 ORTHO05D006584 3.0e-11 72.4 81 39.5
Cfa018258 Carpinus fangiana HOM05D005543 ORTHO05D006584 6.6e-11 71.2 65 55.4
Pp3c17_20130 Physcomitrium patens HOM05D005543 ORTHO05D006584 5.2e-08 61.6 81 29.6


User provided reference genes

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