Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 1.4e-128 463.0 232 100.0
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 2.9e-78 295.8 196 79.6
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.1e-57 226.5 190 62.6
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 2.1e-57 226.5 191 63.4
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 3.6e-57 225.7 191 62.8
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 3.1e-56 222.6 190 62.1
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 4.0e-56 222.2 191 61.8
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 2.9e-54 216.1 192 62.0
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 8.4e-54 214.5 191 62.3
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 2.4e-53 213.0 191 61.3
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 3.2e-53 212.6 193 62.2
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 3.2e-53 212.6 195 60.5
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 7.1e-53 211.5 190 61.6
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 1.2e-52 210.7 191 60.2
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 2.1e-52 209.9 191 60.7
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 2.1e-52 209.9 191 60.2
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 4.6e-52 208.8 191 60.2
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.0e-51 207.6 193 58.0
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 1.3e-51 207.2 201 59.2
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 1.3e-51 207.2 190 61.6
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.7e-51 206.8 217 57.6
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 3.0e-51 206.1 191 59.7
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 3.9e-51 205.7 200 58.0
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 2.5e-50 203.0 190 60.0
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 3.3e-50 202.6 196 60.7
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 9.6e-50 201.1 208 55.8
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 2.1e-49 199.9 195 57.9
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 2.8e-49 199.5 190 60.5
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 1.1e-48 197.6 194 59.3
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 1.4e-48 197.2 190 58.9
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.4e-48 197.2 222 51.4
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 4.0e-48 195.7 190 57.4
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 6.9e-48 194.9 194 59.3
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 6.9e-48 194.9 189 57.1
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 9.0e-48 194.5 190 58.4
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 1.5e-47 193.7 197 56.3
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 2.0e-47 193.4 192 57.3
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 3.4e-47 192.6 190 57.4
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 3.4e-47 192.6 191 57.1
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 4.5e-47 192.2 191 59.7
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 7.6e-47 191.4 192 56.8
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 1.3e-46 190.7 217 50.7
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.3e-46 190.7 205 55.1
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 1.3e-46 190.7 190 56.8
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 1.7e-46 190.3 194 55.7
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 2.9e-46 189.5 190 57.4
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 2.9e-46 189.5 195 55.9
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 3.8e-46 189.1 190 55.8
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 8.4e-46 188.0 196 57.7
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 8.4e-46 188.0 194 54.1
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 8.4e-46 188.0 189 57.7
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 2.4e-45 186.4 190 57.9
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 4.2e-45 185.7 192 55.7
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 7.1e-45 184.9 192 56.2
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 9.3e-45 184.5 190 55.8
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 9.3e-45 184.5 191 56.0
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.2e-44 184.1 188 56.4
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 1.6e-44 183.7 205 56.6
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 1.6e-44 183.7 194 55.7
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 2.1e-44 183.3 191 53.4
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 3.5e-44 182.6 194 51.5
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 4.6e-44 182.2 236 47.9
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 4.6e-44 182.2 190 54.7
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 7.9e-44 181.4 188 55.9
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 7.9e-44 181.4 205 52.7
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 1.0e-43 181.0 191 53.9
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.0e-43 181.0 187 54.0
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 1.0e-43 181.0 192 55.2
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.3e-43 180.6 192 55.7
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 1.8e-43 180.3 188 54.3
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 3.0e-43 179.5 192 53.6
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 3.0e-43 179.5 193 56.0
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 5.1e-43 178.7 211 52.1
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 5.1e-43 178.7 192 54.7
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 6.7e-43 178.3 193 55.4
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 8.7e-43 177.9 190 54.2
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 1.1e-42 177.6 215 48.8
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.5e-42 177.2 193 54.4
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.5e-42 177.2 192 54.2
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 1.9e-42 176.8 191 51.8
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 4.3e-42 175.6 190 53.7
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 4.3e-42 175.6 191 54.5
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 7.4e-42 174.9 188 51.6
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 9.6e-42 174.5 192 53.1
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 9.6e-42 174.5 190 51.1
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 9.6e-42 174.5 190 51.1
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 1.3e-41 174.1 189 51.3
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 1.6e-41 173.7 195 55.4
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.8e-41 172.9 190 52.1
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 4.8e-41 172.2 191 55.0
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 4.8e-41 172.2 191 51.8
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 4.8e-41 172.2 193 57.5
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 8.1e-41 171.4 187 51.9
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 8.1e-41 171.4 188 53.2
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 8.1e-41 171.4 194 50.0
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.8e-40 170.2 189 50.8
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 2.4e-40 169.9 190 52.6
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 2.4e-40 169.9 193 51.8
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 4.0e-40 169.1 190 51.6
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 4.0e-40 169.1 200 49.5
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 5.8e-39 165.2 196 51.0
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 1.3e-38 164.1 191 51.3
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 1.3e-38 164.1 191 51.3
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 2.9e-38 162.9 189 49.7
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 3.2e-37 159.5 191 50.8
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 2.1e-36 156.8 189 48.7
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 4.6e-36 155.6 192 46.9
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 7.9e-36 154.8 192 44.8
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 1.0e-35 154.5 191 48.2
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 1.3e-35 154.1 191 48.7
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 1.8e-35 153.7 194 49.5
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 1.5e-34 150.6 174 51.7
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 4.3e-34 149.1 192 47.9
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 5.6e-34 148.7 210 50.0
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 7.4e-34 148.3 189 49.2
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 9.6e-34 147.9 218 42.7
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 1.6e-33 147.1 204 47.1
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 1.1e-32 144.4 199 44.2
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 4.0e-32 142.5 190 45.8
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 4.0e-32 142.5 196 44.9
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 5.3e-32 142.1 198 45.5
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 9.0e-32 141.4 193 44.6
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 5.8e-31 138.7 187 44.9
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 1.7e-30 137.1 187 42.8
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.7e-30 137.1 193 44.6
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 6.5e-30 135.2 200 46.0
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 8.4e-30 134.8 156 50.6
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.1e-29 134.4 193 44.6
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 1.4e-29 134.0 189 41.8
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 2.5e-29 133.3 196 43.9
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 9.3e-29 131.3 190 42.6
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 1.6e-28 130.6 192 40.6
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.6e-28 130.6 206 43.7
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 1.6e-28 130.6 192 46.4
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 2.1e-28 130.2 192 42.7
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 3.5e-28 129.4 192 43.2
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 1.0e-27 127.9 190 41.6
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 3.9e-27 125.9 187 42.8
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 3.9e-27 125.9 187 43.3
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 5.1e-27 125.6 189 40.7
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 6.7e-27 125.2 188 45.2
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 1.9e-26 123.6 187 41.2
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 2.5e-26 123.2 187 41.7
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 5.7e-26 122.1 191 43.5
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 1.6e-25 120.6 187 41.7
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 1.6e-25 120.6 187 41.7
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 3.7e-25 119.4 187 40.6
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 6.3e-25 118.6 194 40.2
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 8.2e-25 118.2 215 39.1
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 1.1e-24 117.9 192 44.3
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 1.1e-24 117.9 152 45.4
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 1.4e-24 117.5 196 42.9
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 2.4e-24 116.7 187 41.7
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 2.0e-23 113.6 189 39.7
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 2.6e-23 113.2 196 42.3
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 1.7e-22 110.5 152 42.8
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 8.5e-22 108.2 194 40.7
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 8.5e-22 108.2 197 37.6
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 6.1e-20 102.1 99 61.6
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 1.0e-19 101.3 197 39.1
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 8.8e-19 98.2 198 36.4
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 8.8e-19 98.2 198 36.9
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 3.7e-17 92.8 203 38.4
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.1e-16 91.3 87 58.6
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 5.3e-16 89.0 187 37.4
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 7.7e-15 85.1 210 32.9
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 1.0e-11 74.7 151 41.7
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 1.2e-07 61.2 192 32.8
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 1.5e-07 60.8 157 35.7
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 2.0e-07 60.5 153 30.1
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 2.0e-07 60.5 208 29.3
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 2.9e-06 56.6 147 29.3


User provided reference genes

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