Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 4.5e-214 747.7 379 100.0
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 5.2e-85 318.9 245 68.2
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 8.2e-75 285.0 250 62.0
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 8.2e-75 285.0 250 62.0
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 1.7e-72 277.3 250 59.2
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 3.8e-72 276.2 253 59.7
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 8.5e-72 275.0 245 61.2
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 5.5e-71 272.3 248 61.7
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 1.6e-70 270.8 232 62.9
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.7e-70 269.2 242 62.4
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 2.3e-69 266.9 238 61.3
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 8.8e-69 265.0 259 57.9
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 2.0e-68 263.8 258 56.6
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 4.4e-68 262.7 251 58.2
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 3.7e-67 259.6 252 55.2
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 2.4e-66 256.9 248 58.5
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 2.4e-66 256.9 247 56.7
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 7.0e-66 255.4 246 55.3
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 1.6e-65 254.2 259 54.8
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 2.7e-65 253.4 254 55.5
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 3.8e-64 249.6 207 61.4
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 8.6e-64 248.4 286 52.8
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.5e-63 247.7 247 54.7
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 2.5e-63 246.9 248 56.5
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.5e-63 246.9 211 59.2
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 2.5e-63 246.9 248 57.7
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 9.5e-63 245.0 230 55.7
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 2.1e-62 243.8 233 56.7
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 2.8e-62 243.4 228 57.5
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 8.0e-62 241.9 238 54.2
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 1.4e-61 241.1 212 58.0
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 2.6e-60 236.9 249 55.0
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 7.5e-60 235.3 239 54.8
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.3e-59 234.6 249 52.6
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.7e-59 234.2 229 54.6
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.7e-59 234.2 224 53.6
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.7e-59 234.2 232 54.3
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 2.8e-59 233.4 229 54.6
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 2.8e-59 233.4 250 53.6
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 3.7e-59 233.0 211 57.3
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 8.3e-59 231.9 246 54.9
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 1.1e-58 231.5 238 52.9
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.4e-58 231.1 252 52.4
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.8e-58 230.7 244 57.4
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 3.1e-58 229.9 247 51.0
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 4.1e-58 229.6 241 52.3
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.6e-57 227.6 206 55.3
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 3.5e-57 226.5 247 52.2
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 4.5e-57 226.1 205 56.1
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 5.9e-57 225.7 242 52.9
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.3e-56 224.6 252 50.8
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 6.6e-56 222.2 219 56.2
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 1.1e-55 221.5 234 57.7
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 5.6e-55 219.2 242 50.8
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 5.6e-55 219.2 237 56.1
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 7.3e-55 218.8 255 51.4
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 9.5e-55 218.4 244 52.0
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.6e-54 217.6 235 51.5
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 2.1e-54 217.2 243 49.8
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 2.1e-54 217.2 249 50.6
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 6.1e-54 215.7 210 55.7
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 6.1e-54 215.7 238 55.9
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 8.0e-54 215.3 285 47.0
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 1.0e-53 214.9 203 57.6
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 1.0e-53 214.9 248 52.0
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 1.8e-53 214.2 208 56.2
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.8e-53 214.2 249 48.6
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 4.0e-53 213.0 204 55.9
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 5.2e-53 212.6 253 49.0
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 6.8e-53 212.2 243 48.6
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 6.8e-53 212.2 248 52.4
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 6.8e-53 212.2 232 51.7
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.5e-52 211.1 254 49.6
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.6e-52 210.3 220 50.9
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 3.4e-52 209.9 218 56.0
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 5.8e-52 209.1 224 51.3
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 8.3e-51 205.3 255 49.0
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.1e-50 204.9 170 60.6
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 1.7e-48 197.6 184 57.1
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 5.0e-48 196.1 237 47.7
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 6.6e-48 195.7 236 48.7
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 1.6e-46 191.0 209 50.7
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.6e-46 191.0 196 53.6
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 2.8e-46 190.3 204 52.0
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 3.1e-45 186.8 150 60.0
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 4.0e-45 186.4 159 59.1
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 4.0e-45 186.4 193 53.9
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.2e-45 186.0 191 48.7
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.2e-44 184.9 154 61.0
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 3.4e-44 183.3 251 44.2
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 7.5e-44 182.2 196 49.5
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 9.8e-44 181.8 190 52.1
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 2.2e-43 180.6 175 55.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 2.2e-43 180.6 189 51.9
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 2.9e-43 180.3 180 52.8
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 2.9e-43 180.3 202 50.0
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 3.7e-43 179.9 162 56.8
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.7e-43 179.9 202 50.0
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 3.7e-43 179.9 189 49.7
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 4.9e-43 179.5 184 53.3
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 4.9e-43 179.5 183 52.5
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 4.1e-42 176.4 202 50.5
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 4.1e-42 176.4 160 56.2
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 4.6e-41 172.9 179 53.6
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 4.6e-41 172.9 162 55.6
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 6.0e-41 172.6 234 46.6
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 2.3e-40 170.6 252 44.0
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 9.9e-36 155.2 165 49.1
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.2e-35 154.1 252 42.1
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.1e-34 149.8 171 50.9
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 7.1e-34 149.1 86 74.4
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 1.6e-33 147.9 134 54.5
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 2.1e-33 147.5 155 47.7
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 2.3e-32 144.1 198 44.9
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 1.5e-31 141.4 114 55.3
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 5.6e-31 139.4 154 48.7
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 7.6e-28 129.0 137 47.4
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 1.2e-25 121.7 93 60.2
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 1.3e-24 118.2 258 36.8
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.1e-24 116.3 95 57.9
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 9.6e-23 112.1 83 63.9
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 4.9e-19 99.8 107 54.2
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 2.3e-16 90.9 112 48.2


User provided reference genes

Program Settings