Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 1.9e-37 158.7 81 100.0
Oeu024374.1 Olea europaea HOM05D007785 ORTHO05D008997 8.0e-28 126.7 87 78.2
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 1.2e-18 96.3 82 64.6
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 6.4e-17 90.5 80 58.8
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 8.3e-17 90.1 80 58.8
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 4.6e-15 84.3 80 57.5
SalBow5G3019 Salvia bowleyana HOM05D007785 ORTHO05D008997 7.8e-15 83.6 80 57.5
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 5.0e-14 80.9 80 56.2
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 6.6e-14 80.5 80 58.8
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 1.5e-13 79.3 68 61.8
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 1.9e-13 79.0 80 53.8
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 5.6e-13 77.4 80 57.5
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 7.3e-13 77.0 80 51.2
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 6.2e-12 73.9 77 54.5
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 1.4e-11 72.8 80 52.5
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 1.4e-11 72.8 80 50.0
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 1.4e-11 72.8 78 51.3
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 4.0e-11 71.2 76 52.6
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 4.0e-11 71.2 80 50.0
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 5.2e-11 70.9 80 50.0
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 5.2e-11 70.9 76 51.3
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 1.5e-10 69.3 77 48.1
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 2.0e-10 68.9 76 51.3
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 5.8e-10 67.4 74 54.1
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 5.8e-10 67.4 84 54.8
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 7.5e-10 67.0 74 54.1
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 7.5e-10 67.0 77 50.6
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 9.9e-10 66.6 79 51.9
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 9.9e-10 66.6 73 52.1
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 1.3e-09 66.2 77 49.4
unitig_5.g30995 Utricularia gibba HOM05D000121 ORTHO05D000102 1.7e-09 65.9 77 50.6
unitig_748.g7129 Utricularia gibba HOM05D000121 ORTHO05D000102 1.7e-09 65.9 77 50.6
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 3.7e-09 64.7 82 46.3
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 3.7e-09 64.7 101 43.6
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 6.4e-09 63.9 80 50.0
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 8.3e-09 63.5 77 50.6
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 8.3e-09 63.5 69 52.2
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 1.1e-08 63.2 77 46.8
ECA234G3743 Erigeron canadensis HOM05D007785 ORTHO05D008997 1.4e-08 62.8 77 46.8
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 3.2e-08 61.6 78 50.0
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 7.1e-08 60.5 80 41.2
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 7.1e-08 60.5 78 50.0
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 7.1e-08 60.5 78 48.7
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 9.2e-08 60.1 73 46.6
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 1.2e-07 59.7 80 47.5
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 1.6e-07 59.3 78 48.7
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 1.6e-07 59.3 78 42.3
FAN01G0084 Fragaria x ananassa HOM05D007785 ORTHO05D008997 2.1e-07 58.9 80 45.0
RcHm_v2.0_Chr1g0341401 Rosa chinensis HOM05D007785 ORTHO05D008997 2.1e-07 58.9 80 43.8
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 2.7e-07 58.5 74 47.3
Ciclev10023085m.g Citrus clementina HOM05D007785 ORTHO05D008997 4.6e-07 57.8 72 48.6
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 6.0e-07 57.4 80 43.8
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 6.0e-07 57.4 80 43.8
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 6.0e-07 57.4 80 43.8
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 7.8e-07 57.0 78 44.9
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 7.8e-07 57.0 74 45.9
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.0e-06 56.6 67 46.3
Gohir.D09G192932 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.0e-06 56.6 80 43.8
Gohir.A03G002300 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.3e-06 56.2 80 42.5
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 1.3e-06 56.2 87 41.4
DCAR_029543 Daucus carota HOM05D007785 ORTHO05D008997 1.7e-06 55.8 80 43.8
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 2.3e-06 55.5 80 43.8
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 2.3e-06 55.5 77 49.4
Gorai.006G216000 Gossypium raimondii HOM05D012518 ORTHO05D008997 3.0e-06 55.1 80 43.8
HanXRQChr16g0520951 Helianthus annuus HOM05D007785 ORTHO05D008997 3.0e-06 55.1 76 43.4
CsaV3_3G010180 Cucumis sativus L. HOM05D007785 ORTHO05D008997 3.9e-06 54.7 90 41.1
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 3.9e-06 54.7 74 48.6
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 5.1e-06 54.3 79 46.8
FAN03G1138 Fragaria x ananassa HOM05D007785 ORTHO05D008997 5.1e-06 54.3 80 42.5
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 5.1e-06 54.3 74 44.6
Phvul.003G229200 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 6.6e-06 53.9 74 50.0
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 8.6e-06 53.5 74 47.3
Gorai.004G187600 Gossypium raimondii HOM05D012518 ORTHO05D008997 8.6e-06 53.5 67 44.8
HanXRQChr16g0519261 Helianthus annuus HOM05D007785 ORTHO05D008997 8.6e-06 53.5 67 47.8
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 8.6e-06 53.5 75 41.3


User provided reference genes

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