Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021926.1 Olea europaea HOM05D005562 ORTHO05D007785 1.6e-58 229.2 112 100.0
Oeu057671.1 Olea europaea HOM05D005562 ORTHO05D007785 5.6e-56 220.7 112 95.5
Dinv23596 Davidia involucrata HOM05D005562 ORTHO05D001378 7.6e-53 210.3 112 92.0
Cc07_g19550 Coffea canephora HOM05D005562 ORTHO05D007785 3.8e-52 208.0 112 89.3
Migut.B00304 Erythranthe guttata HOM05D005562 ORTHO05D007785 9.3e-51 203.4 112 89.3
Lj9A361T59 Lonicera japonica HOM05D005562 ORTHO05D007785 1.6e-50 202.6 112 88.4
CSS0049808 Camellia sinensis var. sinensis HOM05D005562 ORTHO05D007785 2.7e-50 201.8 112 87.5
SGA_v2.0_scaffold32G13119 Striga asiatica HOM05D005562 ORTHO05D007785 6.0e-50 200.7 110 88.2
DCAR_022068 Daucus carota HOM05D005562 ORTHO05D001378 1.0e-49 199.9 112 86.6
Hund01581 Selenicereus undatus HOM05D005562 ORTHO05D007785 5.1e-49 197.6 112 84.8
TAR381G1284 Trochodendron aralioides HOM05D005562 ORTHO05D007785 2.5e-48 195.3 112 85.7
Hma1.2p1_0584F.1_g183170 Hydrangea macrophylla HOM05D005562 ORTHO05D007785 3.3e-48 194.9 121 81.8
TAR625G0430 Trochodendron aralioides HOM05D005562 ORTHO05D007785 3.3e-48 194.9 112 85.7
vmacro19466 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 4.3e-48 194.5 112 84.8
vmacro23230 Vaccinium macrocarpon HOM05D005562 ORTHO05D007785 4.3e-48 194.5 112 84.8
Rhsim05G0079900 Rhododendron simsii HOM05D005562 ORTHO05D007785 9.7e-48 193.4 112 83.0
CAN.G322.41 Capsicum annuum HOM05D005562 ORTHO05D007785 2.2e-47 192.2 112 83.0
unitig_26.g10242 Utricularia gibba HOM05D005562 ORTHO05D007785 2.8e-47 191.8 112 82.1
MBI16_g19905_MAGBIO Magnolia biondii HOM05D005562 ORTHO05D007785 3.7e-47 191.4 112 82.1
AUR62042921 Chenopodium quinoa HOM05D005562 ORTHO05D007785 4.8e-47 191.0 112 81.2
Solyc01g108660.4 Solanum lycopersicum HOM05D005562 ORTHO05D007785 6.3e-47 190.7 112 83.0
Sopen01g050880 Solanum pennellii HOM05D005562 ORTHO05D007785 6.3e-47 190.7 112 83.0
Nn1g04154 Nelumbo nucifera HOM05D005562 ORTHO05D007785 8.2e-47 190.3 112 83.9
Peaxi162Scf00016g01531 Petunia axillaris HOM05D005562 ORTHO05D007785 1.1e-46 189.9 112 83.0
Thecc.02G095000 Theobroma cacao HOM05D005562 ORTHO05D007785 1.4e-46 189.5 112 81.2
AUR62035865 Chenopodium quinoa HOM05D005562 ORTHO05D007785 2.4e-46 188.7 112 81.2
Sc06g0001440 Simmondsia chinensis HOM05D005562 ORTHO05D007785 2.4e-46 188.7 112 83.0
PGSC0003DMG401025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 2.4e-46 188.7 112 83.0
PGSC0003DMG402025903 Solanum tuberosum HOM05D005562 ORTHO05D007785 2.4e-46 188.7 112 83.0
GSVIVG01031808001 Vitis vinifera HOM05D005562 ORTHO05D007785 2.4e-46 188.7 112 81.2
EL10Ac1g01621 Beta vulgaris HOM05D005562 ORTHO05D007785 5.3e-46 187.6 112 82.1
Actinidia17880 Actinidia chinensis HOM05D005562 ORTHO05D007785 6.9e-46 187.2 112 81.2
Ah.13g074710 Amaranthus hybridus HOM05D005562 ORTHO05D007785 6.9e-46 187.2 112 82.1
Duzib248G1341 Durio zibethinus HOM05D005562 ORTHO05D007785 6.9e-46 187.2 112 80.4
BcaC04g22480 Brassica carinata HOM05D005562 ORTHO05D007785 9.0e-46 186.8 112 81.2
BolC9t54784H Brassica oleracea HOM05D005562 ORTHO05D007785 9.0e-46 186.8 112 81.2
CDE01G0106 Ceratophyllum demersum HOM05D005562 ORTHO05D007785 9.0e-46 186.8 112 81.2
MSTRG.5375 Avicennia marina HOM05D005562 ORTHO05D007785 2.0e-45 185.7 112 82.1
Ciclev10028560m.g Citrus clementina HOM05D005562 ORTHO05D007785 2.0e-45 185.7 112 82.1
Nitab4.5_0003726g0070 Nicotiana tabacum HOM05D005562 ORTHO05D007785 2.6e-45 185.3 112 80.4
ATR0225G001 Amborella trichopoda HOM05D005562 ORTHO05D007785 4.5e-45 184.5 112 80.4
Actinidia17846 Actinidia chinensis HOM05D005562 ORTHO05D007785 7.6e-45 183.7 112 81.2
Gohir.A13G037500 Gossypium hirsutum HOM05D005562 ORTHO05D007785 1.0e-44 183.3 112 80.4
QL11p038618 Quercus lobata HOM05D005562 ORTHO05D007785 1.3e-44 183.0 111 79.3
EL10Ac3g06682 Beta vulgaris HOM05D005562 ORTHO05D007785 1.7e-44 182.6 112 79.5
Cfa005417 Carpinus fangiana HOM05D005562 ORTHO05D007785 1.7e-44 182.6 112 79.5
Haze_01878 Corylus avellana HOM05D005562 ORTHO05D007785 1.7e-44 182.6 111 78.4
MD00G1050500 Malus domestica HOM05D005562 ORTHO05D007785 1.7e-44 182.6 112 77.7
Eucgr.I01182 Eucalyptus grandis HOM05D005562 ORTHO05D007785 2.9e-44 181.8 112 77.7
Gohir.D13G035800 Gossypium hirsutum HOM05D005562 ORTHO05D007785 2.9e-44 181.8 112 79.5
Os03g0617900 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 2.9e-44 181.8 110 80.9
C09p18820 Brassica napus HOM05D005562 ORTHO05D007785 3.8e-44 181.4 112 79.5
PGR142G1983 Punica granatum HOM05D005562 ORTHO05D007785 5.0e-44 181.0 112 78.6
SalBow3G1434 Salvia bowleyana HOM05D005562 ORTHO05D007785 5.0e-44 181.0 112 80.4
Lsat_1_v5_gn_9_108961 Lactuca sativa HOM05D005562 ORTHO05D007785 6.5e-44 180.6 112 78.6
ECA240G1421 Erigeron canadensis HOM05D005562 ORTHO05D007785 8.5e-44 180.3 112 78.6
MD10G1088500 Malus domestica HOM05D005562 ORTHO05D007785 8.5e-44 180.3 112 78.6
RcHm_v2.0_Chr6g0259381 Rosa chinensis HOM05D005562 ORTHO05D007785 1.1e-43 179.9 112 79.5
Sp3g33250 Schrenkiella parvula HOM05D005562 ORTHO05D007785 1.1e-43 179.9 112 77.7
THA.LOC104814570 Tarenaya hassleriana HOM05D005562 ORTHO05D007785 1.1e-43 179.9 112 77.7
BraA09t37197Z Brassica rapa HOM05D005562 ORTHO05D007785 1.4e-43 179.5 112 78.6
FvH4_2g07021 Fragaria vesca HOM05D005562 ORTHO05D007785 1.4e-43 179.5 112 79.5
Manes.15G144000 Manihot esculenta HOM05D005562 ORTHO05D007785 1.4e-43 179.5 112 79.5
BcaB07g31395 Brassica carinata HOM05D005562 ORTHO05D007785 1.9e-43 179.1 112 78.6
Atru.chr5.2830 Acer truncatum HOM05D005562 ORTHO05D007785 2.5e-43 178.7 112 77.7
Aqoxy5G01421 Aquilegia oxysepala HOM05D005562 ORTHO05D007785 2.5e-43 178.7 112 76.8
A09p15570 Brassica napus HOM05D005562 ORTHO05D007785 2.5e-43 178.7 112 78.6
HPP92_018726 Vanilla planifolia HOM05D005562 ORTHO05D007785 2.5e-43 178.7 112 77.7
CiPaw.05G055600 Carya illinoinensis HOM05D005562 ORTHO05D007785 3.2e-43 178.3 112 78.6
TPR.G11154 Trifolium pratense HOM05D005562 ORTHO05D007785 3.2e-43 178.3 112 76.8
TWI79G1184 Tripterygium wilfordii HOM05D005562 ORTHO05D007785 3.2e-43 178.3 112 77.7
Os10g0494200 Oryza sativa ssp. japonica HOM05D005562 ORTHO05D007785 4.2e-43 177.9 110 80.0
TPR.G14865 Trifolium pratense HOM05D005562 ORTHO05D007785 9.3e-43 176.8 112 76.8
Potri.004G145700 Populus trichocarpa HOM05D005562 ORTHO05D007785 1.2e-42 176.4 112 77.7
FAN27G1497 Fragaria x ananassa HOM05D005562 ORTHO05D007785 1.6e-42 176.0 112 78.6
FAN27G3443 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.6e-42 176.0 112 78.6
CARHR110380 Cardamine hirsuta HOM05D005562 ORTHO05D007785 2.1e-42 175.6 112 77.7
HanXRQChr13g0402421 Helianthus annuus HOM05D005562 ORTHO05D007785 2.1e-42 175.6 112 76.8
Lalb_Chr17g0338301 Lupinus albus HOM05D005562 ORTHO05D007785 2.1e-42 175.6 112 75.0
Glyma.07G179700 Glycine max HOM05D005562 ORTHO05D007785 2.7e-42 175.3 112 75.9
Prupe.8G115600 Prunus persica HOM05D005562 ORTHO05D007785 3.6e-42 174.9 112 75.9
Glyma.20G009400 Glycine max HOM05D005562 ORTHO05D007785 4.6e-42 174.5 112 75.0
Phvul.003G012000 Phaseolus vulgaris HOM05D005562 ORTHO05D007785 7.9e-42 173.7 112 75.0
Aa31LG8G16860 Aethionema arabicum HOM05D005562 ORTHO05D007785 1.0e-41 173.3 112 76.8
AT2G19940 Arabidopsis thaliana HOM05D005562 ORTHO05D007785 1.0e-41 173.3 112 75.9
Lj2g0016235 Lotus japonicus HOM05D005562 ORTHO05D007785 1.0e-41 173.3 112 75.0
HanXRQChr16g0528561 Helianthus annuus HOM05D005562 ORTHO05D007785 2.3e-41 172.2 112 75.9
Carub.0003s3419 Capsella rubella HOM05D005562 ORTHO05D007785 3.0e-41 171.8 112 75.9
MELO3C021919.2 Cucumis melo HOM05D005562 ORTHO05D007785 3.0e-41 171.8 112 75.0
Thhalv10023506m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 3.0e-41 171.8 112 75.9
Zm00001eb051410 Zea mays HOM05D005562 ORTHO05D007785 3.0e-41 171.8 112 76.8
Ca_12473_v3 Cicer arietinum L. HOM05D005562 ORTHO05D007785 3.9e-41 171.4 112 74.1
CsaV3_2G014210 Cucumis sativus L. HOM05D005562 ORTHO05D007785 6.7e-41 170.6 112 74.1
AL3G48260 Arabidopsis lyrata HOM05D005562 ORTHO05D007785 8.7e-41 170.2 112 75.0
ClCG09G017590 Citrullus lanatus HOM05D005562 ORTHO05D007785 1.1e-40 169.9 112 74.1
Medtr1g012540 Medicago truncatula HOM05D005562 ORTHO05D007785 1.1e-40 169.9 112 75.0
CANSAT25G3890 Cannabis sativa HOM05D005562 ORTHO05D007785 1.9e-40 169.1 112 75.0
Gorai.013G040500 Gossypium raimondii HOM05D005562 ORTHO05D007785 1.9e-40 169.1 138 65.2
Psat6g096120 Pisum sativum HOM05D005562 ORTHO05D007785 1.9e-40 169.1 112 72.3
Sed0010996 Sechium edule HOM05D005562 ORTHO05D007785 1.9e-40 169.1 112 74.1
BolC9t57765H Brassica oleracea HOM05D005562 ORTHO05D007785 2.5e-40 168.7 120 72.5
arahy.Tifrunner.gnm1.ann1.4TQ1KW Arachis hypogaea HOM05D005562 ORTHO05D007785 5.7e-40 167.5 108 77.8
BcaC04g19978 Brassica carinata HOM05D005562 ORTHO05D007785 7.4e-40 167.2 114 76.3
VMungo1215G0206 Vigna mungo HOM05D005562 ORTHO05D007785 2.8e-39 165.2 112 71.4
SMO116G0475 Selaginella moellendorffii HOM05D005562 ORTHO05D007785 6.3e-39 164.1 112 72.3
AagrBONN_evm.TU.Sc2ySwM_117.3897 Anthoceros agrestis HOM05D005562 ORTHO05D007785 1.1e-38 163.3 112 70.5
Mapoly0036s0058 Marchantia polymorpha HOM05D005562 ORTHO05D007785 1.4e-38 162.9 112 69.6
Pp3c8_22120 Physcomitrium patens HOM05D005562 ORTHO05D007785 1.8e-38 162.5 112 69.6
PSO170G1474 Papaver somniferum HOM05D005562 ORTHO05D007785 2.4e-38 162.2 111 73.0
Pp3c24_19140 Physcomitrium patens HOM05D005562 ORTHO05D007785 3.1e-38 161.8 112 70.5
Cre03.g146187 Chlamydomonas reinhardtii HOM05D005562 ORTHO05D007785 4.1e-38 161.4 110 71.8
SalBow4G0329 Salvia bowleyana HOM05D005562 ORTHO05D007785 4.1e-38 161.4 147 60.5
PSO210G1477 Papaver somniferum HOM05D005562 ORTHO05D007785 6.9e-38 160.6 111 72.1
COL.COLO4_11726 Corchorus olitorius HOM05D005562 ORTHO05D007785 1.5e-37 159.5 97 79.4
Nitab4.5_0001401g0050 Nicotiana tabacum HOM05D005562 ORTHO05D007785 1.5e-37 159.5 96 80.2
CBR_g5649 Chara braunii HOM05D005562 ORTHO05D001468 2.0e-37 159.1 112 67.9
arahy.Tifrunner.gnm1.ann1.ZFI36T Arachis hypogaea HOM05D005562 ORTHO05D007785 4.5e-37 157.9 99 78.8
PRCOL_00005741 Prasinoderma coloniale HOM05D005562 ORTHO05D007785 3.9e-33 144.8 112 64.3
Thhalv10002012m.g Eutrema salsugineum HOM05D005562 ORTHO05D007785 4.4e-24 114.8 112 55.4
Cpa.g.sc62.56 Carica papaya HOM05D005562 ORTHO05D007785 1.9e-19 99.4 112 50.0
FAN24G3180 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.4e-17 93.2 112 50.9
FAN15G1080 Fragaria x ananassa HOM05D005562 ORTHO05D001378 1.8e-17 92.8 112 50.9
A10p14750 Brassica napus HOM05D005562 ORTHO05D007785 6.3e-15 84.3 53 75.5
PSO384G1669 Papaver somniferum HOM05D005562 ORTHO05D007785 1.7e-07 59.7 110 37.3
C09p49210 Brassica napus HOM05D005562 ORTHO05D007785 3.7e-07 58.5 52 63.5


User provided reference genes

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