Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021907.1 Olea europaea HOM05D007019 ORTHO05D008398 6.2e-264 913.7 497 100.0
MSTRG.1627 Avicennia marina HOM05D007019 ORTHO05D008398 4.7e-195 684.9 498 78.3
QL02p018053 Quercus lobata HOM05D007019 ORTHO05D008398 1.2e-185 653.7 493 73.8
Cc00_g05220 Coffea canephora HOM05D007019 ORTHO05D008398 4.9e-184 648.3 498 68.7
CiPaw.07G232900 Carya illinoinensis HOM05D007019 ORTHO05D008398 1.6e-182 643.3 495 68.3
Manes.16G132200 Manihot esculenta HOM05D007019 ORTHO05D008398 3.9e-181 638.6 494 67.4
Cfa013011 Carpinus fangiana HOM05D007019 ORTHO05D008398 3.3e-180 635.6 497 69.8
Actinidia14141 Actinidia chinensis HOM05D007019 ORTHO05D008398 9.5e-180 634.0 498 67.5
CSS0016918 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.3e-178 629.4 498 67.9
CSS0023374 Camellia sinensis var. sinensis HOM05D007019 ORTHO05D008398 2.3e-178 629.4 498 67.9
Eucgr.C04032 Eucalyptus grandis HOM05D007019 ORTHO05D008398 7.5e-177 624.4 497 66.4
Atru.chr7.2574 Acer truncatum HOM05D007019 ORTHO05D008398 2.4e-175 619.4 498 65.9
Prupe.1G396900 Prunus persica HOM05D007019 ORTHO05D008398 3.2e-175 619.0 497 66.6
Migut.E01445 Erythranthe guttata HOM05D007019 ORTHO05D008398 4.1e-175 618.6 499 68.7
TWI32G0429 Tripterygium wilfordii HOM05D007019 ORTHO05D008398 4.1e-175 618.6 495 67.5
Ciclev10008089m.g Citrus clementina HOM05D007019 ORTHO05D008398 1.6e-174 616.7 499 68.3
Thecc.09G013400 Theobroma cacao HOM05D007019 ORTHO05D008398 1.6e-174 616.7 501 66.7
Duzib168G1437 Durio zibethinus HOM05D007019 ORTHO05D008398 7.8e-174 614.4 503 66.2
Gorai.009G064200 Gossypium raimondii HOM05D007019 ORTHO05D008398 1.0e-173 614.0 500 66.2
Hma1.2p1_0737F.1_g210790 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 8.6e-173 610.9 502 66.5
Lj7A737G40 Lonicera japonica HOM05D007019 ORTHO05D008398 1.1e-172 610.5 507 64.9
COL.COLO4_18972 Corchorus olitorius HOM05D007019 ORTHO05D008398 3.3e-172 609.0 502 68.1
CANSAT25G0065 Cannabis sativa HOM05D007019 ORTHO05D008398 7.3e-172 607.8 500 65.8
Gohir.A05G061000 Gossypium hirsutum HOM05D007019 ORTHO05D008398 7.3e-172 607.8 500 68.0
unitig_46.g18223 Utricularia gibba HOM05D007019 ORTHO05D008398 2.8e-171 605.9 496 66.5
Gohir.D05G063200 Gossypium hirsutum HOM05D007019 ORTHO05D008398 1.4e-170 603.6 500 67.4
DCAR_003030 Daucus carota HOM05D007019 ORTHO05D008398 3.1e-170 602.4 496 64.9
Potri.018G016200 Populus trichocarpa HOM05D007019 ORTHO05D008398 1.2e-169 600.5 498 63.7
Rhsim02G0217600 Rhododendron simsii HOM05D007019 ORTHO05D008398 3.7e-168 595.5 499 63.7
PGSC0003DMG400014784 Solanum tuberosum HOM05D007019 ORTHO05D008398 9.2e-167 590.9 498 65.5
Lj6g0025581 Lotus japonicus HOM05D007019 ORTHO05D008398 7.8e-166 587.8 498 62.7
ClCG08G013800 Citrullus lanatus HOM05D007019 ORTHO05D008398 1.0e-165 587.4 496 68.3
FvH4_2g41350 Fragaria vesca HOM05D007019 ORTHO05D008398 1.7e-165 586.6 494 63.0
arahy.Tifrunner.gnm1.ann1.SS16UG Arachis hypogaea HOM05D007019 ORTHO05D008398 5.1e-165 585.1 494 63.8
arahy.Tifrunner.gnm1.ann1.MG10WM Arachis hypogaea HOM05D007019 ORTHO05D008398 8.6e-165 584.3 494 63.8
VMungo0540G1233 Vigna mungo HOM05D007019 ORTHO05D008398 1.9e-164 583.2 496 67.9
MELO3C011312.2 Cucumis melo HOM05D007019 ORTHO05D008398 9.5e-164 580.9 496 66.7
CsaV3_2G032590 Cucumis sativus L. HOM05D007019 ORTHO05D008398 1.2e-163 580.5 496 66.5
CAN.G273.24 Capsicum annuum HOM05D007019 ORTHO05D008398 1.1e-162 577.4 495 66.5
Psat5g174160 Pisum sativum HOM05D007019 ORTHO05D008398 1.4e-162 577.0 495 62.6
RcHm_v2.0_Chr6g0299181 Rosa chinensis HOM05D007019 ORTHO05D008398 2.3e-162 576.2 494 62.3
Nn6g33490 Nelumbo nucifera HOM05D007019 ORTHO05D008398 4.0e-162 575.5 511 61.8
Glyma.18G091000 Glycine max HOM05D007019 ORTHO05D008398 5.2e-162 575.1 494 63.6
Sed0002524 Sechium edule HOM05D007019 ORTHO05D008398 8.9e-162 574.3 502 66.1
Solyc08g068820.3 Solanum lycopersicum HOM05D007019 ORTHO05D008398 5.8e-161 571.6 498 61.2
Cpa.g.sc148.46 Carica papaya HOM05D007019 ORTHO05D008398 7.6e-161 571.2 500 67.2
Glyma.08G321000 Glycine max HOM05D007019 ORTHO05D008398 7.6e-161 571.2 501 62.9
PGR044G2245 Punica granatum HOM05D007019 ORTHO05D008398 2.2e-160 569.7 503 60.8
Ca_26389_v3 Cicer arietinum L. HOM05D007019 ORTHO05D008398 2.9e-160 569.3 493 66.3
FAN27G2994 Fragaria x ananassa HOM05D007019 ORTHO05D008398 2.9e-160 569.3 485 62.3
Lalb_Chr15g0081591 Lupinus albus HOM05D007019 ORTHO05D008398 2.9e-160 569.3 494 62.3
Nitab4.5_0000406g0110 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.5e-158 562.4 496 64.5
Phvul.006G047900 Phaseolus vulgaris HOM05D007019 ORTHO05D008398 7.8e-158 561.2 496 65.5
Hund25606 Selenicereus undatus HOM05D007019 ORTHO05D008398 7.8e-158 561.2 519 62.8
SGA_v2.0_scaffold169G38600 Striga asiatica HOM05D007019 ORTHO05D008398 1.3e-157 560.5 511 63.0
Medtr3g053700 Medicago truncatula HOM05D007019 ORTHO05D008398 5.1e-157 558.5 494 61.3
ECA240G4302 Erigeron canadensis HOM05D007019 ORTHO05D008398 1.9e-156 556.6 519 61.5
HanXRQChr03g0084841 Helianthus annuus HOM05D007019 ORTHO05D008398 2.1e-155 553.1 523 59.5
MBI14_g16432_MAGBIO Magnolia biondii HOM05D007019 ORTHO05D008398 2.1e-155 553.1 512 61.1
Thhalv10000137m.g Eutrema salsugineum HOM05D007019 ORTHO05D008398 1.5e-153 547.0 508 63.0
TPR.G32253 Trifolium pratense HOM05D007019 ORTHO05D008398 2.6e-153 546.2 495 60.6
Aqoxy7G03288 Aquilegia oxysepala HOM05D007019 ORTHO05D008398 3.4e-153 545.8 499 57.9
Sabra18G0019700 Salix brachista HOM05D007019 ORTHO05D008398 4.4e-153 545.4 527 58.4
THA.LOC104819948 Tarenaya hassleriana HOM05D007019 ORTHO05D008398 4.9e-152 542.0 518 61.2
PSO731G0070 Papaver somniferum HOM05D007019 ORTHO05D008398 1.4e-151 540.4 506 59.1
Sc23g0006120 Simmondsia chinensis HOM05D007019 ORTHO05D008398 1.9e-151 540.0 515 62.3
PSO210G0129 Papaver somniferum HOM05D007019 ORTHO05D008398 3.5e-150 535.8 512 58.2
Sp4g03850 Schrenkiella parvula HOM05D007019 ORTHO05D008398 1.3e-149 533.9 506 57.9
Nitab4.5_0012106g0030 Nicotiana tabacum HOM05D007019 ORTHO05D008398 3.0e-149 532.7 499 62.7
Aa31LG7G11570 Aethionema arabicum HOM05D007019 ORTHO05D008398 5.1e-149 531.9 504 60.7
Lsat_1_v5_gn_6_78060 Lactuca sativa HOM05D007019 ORTHO05D008398 6.6e-149 531.6 508 58.7
FAN15G0718 Fragaria x ananassa HOM05D007019 ORTHO05D008398 4.3e-148 528.9 512 57.8
CDE04G0815 Ceratophyllum demersum HOM05D007019 ORTHO05D008398 5.6e-148 528.5 507 56.0
CARHR294580 Cardamine hirsuta HOM05D007019 ORTHO05D008398 6.2e-147 525.0 511 57.3
ATR0580G102 Amborella trichopoda HOM05D007019 ORTHO05D008398 1.4e-146 523.9 507 56.6
Carub.0004s0445 Capsella rubella HOM05D007019 ORTHO05D008398 1.8e-146 523.5 505 56.8
AL4G15870 Arabidopsis lyrata HOM05D007019 ORTHO05D008398 1.1e-143 514.2 506 60.3
AT2G24830 Arabidopsis thaliana HOM05D007019 ORTHO05D008398 1.9e-143 513.5 506 56.7
EL10Ac2g02454 Beta vulgaris HOM05D007019 ORTHO05D008398 1.9e-143 513.5 549 55.0
Zm00001eb257650 Zea mays HOM05D007019 ORTHO05D008398 1.5e-140 503.8 505 54.7
HPP92_010745 Vanilla planifolia HOM05D007019 ORTHO05D008398 1.9e-140 503.4 510 58.2
BolC8t51475H Brassica oleracea HOM05D007019 ORTHO05D008398 2.4e-138 496.5 509 57.6
C08p39020 Brassica napus HOM05D007019 ORTHO05D008398 5.3e-138 495.4 509 57.6
BraA09t41004Z Brassica rapa HOM05D007019 ORTHO05D008398 3.4e-137 492.7 508 56.1
A09p56090 Brassica napus HOM05D007019 ORTHO05D008398 2.2e-136 490.0 510 56.3
A09p56030 Brassica napus HOM05D007019 ORTHO05D008398 2.9e-136 489.6 506 55.9
AUR62032443 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.2e-134 484.2 526 53.2
AUR62024776 Chenopodium quinoa HOM05D007019 ORTHO05D008398 1.3e-133 480.7 545 51.4
Sopen08g022560 Solanum pennellii HOM05D007019 ORTHO05D008398 1.8e-133 480.3 403 61.0
BcaC07g40903 Brassica carinata HOM05D007019 ORTHO05D008398 3.3e-132 476.1 496 57.3
vmacro11274 Vaccinium macrocarpon HOM05D007019 ORTHO05D008398 4.8e-131 472.2 502 54.6
SEGI_04420 Sequoiadendron giganteum HOM05D007019 ORTHO05D008398 2.4e-130 469.9 512 57.0
TAR636G0280 Trochodendron aralioides HOM05D007019 ORTHO05D008398 6.7e-125 451.8 344 67.7
Dinv03401 Davidia involucrata HOM05D007019 ORTHO05D008398 1.1e-124 451.1 364 70.6
MD08G1051900 Malus domestica HOM05D007019 ORTHO05D008398 6.5e-120 435.3 359 65.5
Hma1.2p1_0737F.1_g210800 Hydrangea macrophylla HOM05D007019 ORTHO05D008398 8.2e-107 391.7 331 64.7
Pp3c21_5730 Physcomitrium patens HOM05D007019 ORTHO05D008398 7.2e-103 378.6 526 44.1
Mapoly0067s0020 Marchantia polymorpha HOM05D007019 ORTHO05D008398 1.5e-100 370.9 514 43.4
SMO116G0382 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 3.0e-93 346.7 499 43.1
SHI21092 Sapria himalayana HOM05D007019 ORTHO05D008398 1.1e-90 338.2 589 39.6
Dinv10229 Davidia involucrata HOM05D007019 ORTHO05D008398 3.5e-89 333.2 353 58.9
AagrBONN_evm.TU.Sc2ySwM_117.1463 Anthoceros agrestis HOM05D007019 ORTHO05D008398 1.1e-66 258.5 362 47.0
GSVIVG01036005001 Vitis vinifera HOM05D007019 ORTHO05D008398 1.6e-65 254.6 187 68.4
CBR_g30106 Chara braunii HOM05D007019 ORTHO05D008398 8.6e-56 222.2 564 33.0
SalBow6G1623 Salvia bowleyana HOM05D007019 ORTHO05D008398 2.1e-54 217.6 191 68.6
Peaxi162Scf01419g00115 Petunia axillaris HOM05D007019 ORTHO05D008398 1.6e-38 164.9 142 61.3
SMO116G0105 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 6.9e-29 132.9 298 35.2
Os02g0793000 Oryza sativa ssp. japonica HOM05D007019 ORTHO05D008398 1.3e-24 118.6 105 56.2
AagrBONN_evm.TU.Sc2ySwM_117.1462 Anthoceros agrestis HOM05D007019 ORTHO05D008398 9.0e-21 105.9 153 41.2
SMO269G0003 Selaginella moellendorffii HOM05D007019 ORTHO05D008398 1.9e-18 98.2 301 31.9
TAR636G2565 Trochodendron aralioides HOM05D007019 ORTHO05D008398 1.5e-07 62.0 43 79.1
Cre07.g355700 Chlamydomonas reinhardtii HOM05D007019 ORTHO05D008398 2.5e-07 61.2 254 27.6
Lsat_1_v5_gn_5_90461 Lactuca sativa HOM05D004574 ORTHO05D005612 4.3e-07 60.5 49 57.1
Nn2g12259 Nelumbo nucifera HOM05D004574 ORTHO05D005612 9.7e-07 59.3 71 45.1
CANSAT11G2415 Cannabis sativa HOM05D004574 ORTHO05D005612 1.6e-06 58.5 65 46.2
ECA234G1322 Erigeron canadensis HOM05D004574 ORTHO05D005612 2.8e-06 57.8 67 46.3
arahy.Tifrunner.gnm1.ann1.J06XH2 Arachis hypogaea HOM05D004574 ORTHO05D005612 3.7e-06 57.4 61 45.9
CSS0028433 Camellia sinensis var. sinensis HOM05D004574 ORTHO05D005612 4.8e-06 57.0 129 35.7
Lj9A709T23 Lonicera japonica HOM05D004574 ORTHO05D005612 6.3e-06 56.6 55 49.1
HPP92_005314 Vanilla planifolia HOM05D004574 ORTHO05D005612 6.3e-06 56.6 69 42.0
HPP92_005340 Vanilla planifolia HOM05D004574 ORTHO05D005612 6.3e-06 56.6 69 42.0
Actinidia04251 Actinidia chinensis HOM05D004574 ORTHO05D005612 8.2e-06 56.2 80 45.0
Solyc07g007040.4 Solanum lycopersicum HOM05D004574 ORTHO05D005612 8.2e-06 56.2 51 51.0
Sopen07g003110 Solanum pennellii HOM05D004574 ORTHO05D005612 8.2e-06 56.2 51 51.0


User provided reference genes

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