Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 4.4e-297 1023.8 519 100.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 1.7e-243 845.9 522 80.5
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 6.8e-237 823.9 520 77.7
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 2.8e-235 818.5 522 79.1
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 5.9e-233 810.8 523 76.9
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 3.8e-232 808.1 519 77.6
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 5.0e-232 807.7 531 77.2
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 5.0e-232 807.7 523 76.5
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 6.5e-232 807.4 523 76.5
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 1.5e-231 806.2 523 76.5
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 2.5e-231 805.4 518 76.4
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 1.6e-230 802.7 520 76.7
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 6.1e-230 800.8 522 77.0
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.0e-229 800.0 516 75.8
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 1.8e-229 799.3 518 77.4
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 3.0e-229 798.5 519 76.1
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 4.0e-229 798.1 522 75.9
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 5.2e-229 797.7 508 78.5
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 6.8e-229 797.3 516 75.4
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 6.8e-229 797.3 519 78.0
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 2.0e-228 795.8 520 74.8
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 7.5e-228 793.9 521 75.6
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 7.5e-228 793.9 511 76.5
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.3e-227 793.1 518 75.9
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 2.2e-227 792.3 507 76.7
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 3.7e-227 791.6 519 75.9
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 6.3e-227 790.8 508 77.6
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 6.3e-227 790.8 521 76.2
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 8.3e-227 790.4 518 75.9
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 1.4e-226 789.6 518 75.7
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 2.4e-226 788.9 522 76.6
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 3.1e-226 788.5 521 74.9
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 3.1e-226 788.5 521 75.0
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 5.4e-226 787.7 521 75.0
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 9.1e-226 786.9 519 75.1
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 2.7e-225 785.4 519 75.1
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 2.7e-225 785.4 521 75.0
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 4.5e-225 784.6 518 74.9
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 2.3e-224 782.3 521 73.9
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 2.3e-224 782.3 522 73.9
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 8.6e-224 780.4 518 75.3
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.9e-223 779.2 518 74.3
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 9.5e-223 776.9 519 73.8
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 2.1e-222 775.8 524 75.4
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 8.0e-222 773.9 509 74.1
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 1.0e-221 773.5 520 72.9
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 1.0e-221 773.5 508 73.4
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 1.4e-221 773.1 517 73.9
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 2.3e-221 772.3 519 73.0
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 3.0e-221 771.9 471 78.8
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 3.0e-221 771.9 529 74.5
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 2.6e-220 768.8 519 75.0
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 5.7e-220 767.7 504 74.6
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 1.3e-219 766.5 507 73.8
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.7e-219 766.1 519 73.2
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 2.9e-219 765.4 507 75.5
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 4.9e-219 764.6 508 74.0
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 4.9e-219 764.6 516 73.1
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 1.4e-218 763.1 517 71.8
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 1.8e-218 762.7 514 73.5
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 1.8e-218 762.7 519 71.3
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 3.2e-218 761.9 521 72.7
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 5.4e-218 761.1 514 72.8
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 7.0e-218 760.8 510 74.5
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 1.2e-217 760.0 516 72.1
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 1.6e-217 759.6 514 71.2
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 1.6e-217 759.6 496 75.4
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 2.7e-217 758.8 517 73.7
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 2.7e-217 758.8 443 80.1
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 7.8e-217 757.3 510 73.5
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 7.8e-217 757.3 485 76.3
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 5.0e-216 754.6 520 72.3
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 6.6e-216 754.2 512 73.6
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 6.6e-216 754.2 473 80.3
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 1.1e-215 753.4 486 77.0
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 1.1e-215 753.4 518 72.6
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 4.3e-215 751.5 515 73.0
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 7.3e-215 750.7 513 72.1
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 2.1e-214 749.2 510 72.2
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 3.6e-214 748.4 508 70.9
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 8.0e-214 747.3 507 71.0
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 8.0e-214 747.3 475 74.7
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 1.0e-213 746.9 508 70.7
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 1.4e-213 746.5 508 70.7
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 3.4e-212 741.9 610 64.9
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 4.4e-212 741.5 514 70.4
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 4.4e-212 741.5 510 72.9
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 2.2e-211 739.2 484 75.2
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 3.5e-209 731.9 517 70.8
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 6.0e-209 731.1 517 71.0
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.5e-207 726.5 517 70.2
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 1.9e-207 726.1 476 74.4
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 2.5e-207 725.7 427 78.9
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.6e-206 723.0 442 77.6
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 5.2e-205 718.0 469 74.2
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 8.9e-205 717.2 508 72.2
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 8.9e-189 664.1 374 84.5
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 2.9e-187 659.1 519 67.8
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 1.3e-182 643.7 420 75.0
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 7.9e-177 624.4 519 60.3
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 3.5e-169 599.0 386 78.0
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 2.4e-157 559.7 383 73.4
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.3e-155 553.9 515 56.1
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 3.2e-154 549.3 434 60.4
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 2.8e-150 536.2 387 69.5
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 7.7e-148 528.1 435 58.2
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 2.6e-140 503.1 504 52.0
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 1.0e-115 421.4 498 46.6
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.9e-114 417.2 519 48.2
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 1.8e-112 410.6 530 44.3
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 6.8e-112 408.7 519 47.6
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 8.8e-112 408.3 466 49.6
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 2.6e-111 406.8 466 49.8
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.1e-109 401.4 526 48.1
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 2.7e-108 396.7 517 46.4
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 9.5e-106 388.3 477 45.1
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.6e-103 380.2 255 73.3
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.7e-103 379.0 516 47.1
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 4.6e-84 316.2 176 83.0
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 3.4e-79 300.1 481 37.6
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 9.6e-74 282.0 169 76.3
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 6.2e-49 199.5 170 65.9
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 1.4e-48 198.4 162 64.8
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 9.0e-40 169.1 138 63.0
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 5.0e-38 163.3 131 62.6
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 8.7e-35 152.5 88 86.4
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 3.2e-29 134.0 105 62.9
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 4.8e-25 120.2 141 44.7
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 1.7e-22 111.7 104 58.7
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.4e-18 97.1 58 75.9
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 1.1e-13 82.4 114 47.4
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 2.3e-11 74.7 114 43.9
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 5.7e-10 70.1 102 52.9
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 1.4e-08 65.5 97 51.5
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 1.2e-07 62.4 38 76.3
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 2.2e-06 58.2 98 49.0


User provided reference genes

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