Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 2.5e-155 552.4 341 100.0
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 9.9e-112 407.5 334 70.1
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 2.7e-109 399.4 263 79.5
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 7.9e-109 397.9 332 72.3
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 1.3e-108 397.1 339 61.4
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 2.3e-108 396.4 331 70.7
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 9.6e-107 391.0 338 67.5
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 6.2e-106 388.3 301 64.1
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 1.3e-103 380.6 335 65.7
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 1.7e-103 380.2 263 70.0
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 2.2e-103 379.8 326 66.6
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 8.4e-103 377.9 336 67.3
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 8.4e-103 377.9 334 66.2
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 1.4e-102 377.1 328 71.3
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 2.4e-102 376.3 303 63.7
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 2.4e-102 376.3 259 74.9
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 1.6e-101 373.6 338 63.3
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 2.7e-101 372.9 296 71.3
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 3.5e-101 372.5 340 62.9
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 1.3e-100 370.5 340 62.1
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 1.5e-99 367.1 340 60.0
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 2.5e-99 366.3 320 66.6
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 4.3e-99 365.5 303 63.4
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 4.8e-98 362.1 263 67.7
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 4.8e-98 362.1 263 67.7
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 1.4e-97 360.5 323 65.0
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 2.0e-96 356.7 324 63.0
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 4.5e-96 355.5 296 69.6
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.0e-95 354.4 258 69.0
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 1.1e-94 350.9 322 62.1
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 1.9e-94 350.1 296 78.0
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 2.1e-93 346.7 306 62.4
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 2.7e-93 346.3 341 63.0
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 3.5e-93 345.9 313 59.7
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 2.3e-92 343.2 296 78.0
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 2.3e-92 343.2 327 67.0
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 3.0e-92 342.8 298 67.8
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 8.7e-92 341.3 296 77.7
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 8.7e-92 341.3 296 76.4
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 8.7e-92 341.3 318 73.0
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 1.1e-91 340.9 296 77.4
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 1.1e-91 340.9 258 64.0
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 1.9e-91 340.1 296 77.4
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 5.7e-91 338.6 337 69.4
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 7.4e-91 338.2 296 77.0
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 1.1e-89 334.3 259 61.8
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 3.1e-89 332.8 321 59.8
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 3.1e-89 332.8 328 57.3
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 4.1e-89 332.4 321 59.2
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 6.9e-89 331.6 259 76.4
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 1.2e-88 330.9 310 69.7
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 1.7e-87 327.0 262 59.2
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 2.5e-86 323.2 292 61.3
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 5.5e-86 322.0 258 64.7
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 2.7e-85 319.7 238 66.8
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 2.7e-85 319.7 304 63.2
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 7.9e-85 318.2 286 59.8
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 1.8e-84 317.0 240 64.6
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 1.9e-83 313.5 270 67.0
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 7.4e-83 311.6 242 62.4
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 9.7e-83 311.2 327 51.4
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 1.1e-81 307.8 261 54.0
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 1.4e-81 307.4 240 62.9
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 5.9e-80 302.0 240 61.2
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 1.0e-79 301.2 260 56.2
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 2.2e-79 300.1 240 62.1
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 6.5e-79 298.5 322 50.6
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 2.5e-78 296.6 265 70.9
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 2.1e-77 293.5 307 58.3
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 2.3e-76 290.0 269 62.5
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 2.0e-75 287.0 324 57.1
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 1.3e-74 284.3 377 57.8
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 6.3e-74 282.0 253 53.4
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 1.4e-73 280.8 217 65.4
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 1.0e-71 274.6 194 71.1
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 1.7e-71 273.9 241 72.6
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 2.2e-71 273.5 240 55.8
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 1.1e-70 271.2 205 67.8
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 9.4e-70 268.1 253 67.2
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 1.2e-69 267.7 272 72.1
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 2.1e-69 266.9 234 70.9
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 8.8e-68 261.5 255 52.2
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 7.4e-67 258.5 339 53.7
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 8.2e-66 255.0 308 55.2
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 1.8e-65 253.8 206 68.4
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 3.1e-65 253.1 314 51.3
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 2.9e-63 246.5 206 63.1
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 1.1e-62 244.6 336 52.7
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 3.2e-62 243.0 329 47.4
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 2.2e-58 230.3 331 53.2
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 1.4e-57 227.6 324 47.8
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 9.1e-57 224.9 337 47.5
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 1.6e-56 224.2 309 49.5
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 5.0e-55 219.2 346 51.2
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 4.2e-54 216.1 346 52.0
CsaV3_UNG066530 Cucumis sativus L. HOM05D006034 ORTHO05D007535 5.7e-51 205.7 160 59.4
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 2.2e-50 203.8 238 61.3
Sed0024135 Sechium edule HOM05D006034 ORTHO05D007535 8.3e-50 201.8 201 65.7
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 5.9e-48 195.7 272 53.3
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 6.5e-47 192.2 148 60.8
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 1.5e-43 181.0 190 53.7
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 1.3e-42 177.9 264 41.3
CSS0015474 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 3.7e-42 176.4 194 73.2
Hma1.2p1_0800F.1_g219980 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.0e-40 170.6 168 67.3
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 5.9e-40 169.1 134 63.4
Peaxi162Scf00498g00128 Petunia axillaris HOM05D006034 ORTHO05D007535 1.5e-38 164.5 130 69.2
Phvul.004G171500 Phaseolus vulgaris HOM05D006034 ORTHO05D007535 3.3e-38 163.3 201 53.7
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 4.7e-37 159.5 248 35.5
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 8.0e-37 158.7 214 45.8
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 5.2e-36 156.0 239 40.2
AT4G29540 Arabidopsis thaliana HOM05D006034 ORTHO05D007535 3.4e-35 153.3 209 67.0
BolC1t00956H Brassica oleracea HOM05D000577 ORTHO05D001093 4.4e-35 152.9 264 37.5
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 5.7e-35 152.5 105 74.3
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 5.4e-33 146.0 234 39.7
TWI34G0201 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 5.9e-32 142.5 124 51.6
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 1.3e-31 141.4 91 73.6
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 2.3e-31 140.6 91 74.7
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 9.5e-30 135.2 91 71.4
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 3.6e-29 133.3 91 70.3
unitig_27.g24727 Utricularia gibba HOM05D006034 ORTHO05D007535 1.1e-22 111.7 111 73.9
BcaC09g52218 Brassica carinata HOM05D006034 ORTHO05D007535 5.6e-22 109.4 87 58.6
THA.LOC109116077 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 1.8e-20 104.4 120 49.2
Ca_29456_v3 Cicer arietinum L. HOM05D003386 ORTHO05D007535 4.4e-19 99.8 253 30.0
arahy.Tifrunner.gnm1.ann1.UHY7MZ Arachis hypogaea HOM05D006034 ORTHO05D005279 1.3e-18 98.2 136 43.4
MD17G1181800 Malus domestica HOM05D006034 ORTHO05D007535 1.7e-18 97.8 59 76.3
Hma1.2p1_0800F.1_g220000 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.2e-18 97.4 68 72.1
BolC1t00940H Brassica oleracea HOM05D006034 ORTHO05D007535 1.4e-17 94.7 85 50.6
arahy.Tifrunner.gnm1.ann1.RIAB4B Arachis hypogaea HOM05D006034 ORTHO05D007535 1.0e-15 88.6 92 55.4
C01p09900 Brassica napus HOM05D006034 ORTHO05D007535 2.1e-13 80.9 72 56.9
CsaV3_UNG066540 Cucumis sativus L. HOM05D006034 ORTHO05D007535 2.8e-13 80.5 65 56.9
arahy.Tifrunner.gnm1.ann1.C7GQ4M Arachis hypogaea HOM05D006034 ORTHO05D007535 5.2e-12 76.3 55 67.3
Haze_27155 Corylus avellana HOM05D003386 ORTHO05D007535 8.4e-10 68.9 130 36.2
Dinv36751 Davidia involucrata HOM05D006034 ORTHO05D007535 1.1e-09 68.6 51 64.7


User provided reference genes

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