Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021807.1 Olea europaea HOM05D005042 ORTHO05D006080 3.2e-235 818.1 445 100.0
Oeu057419.1 Olea europaea HOM05D005042 ORTHO05D006080 7.3e-107 391.7 628 45.9
Oeu024162.6 Olea europaea HOM05D005042 ORTHO05D006080 6.4e-103 378.6 621 41.2
Migut.E00252 Erythranthe guttata HOM05D005042 ORTHO05D006080 1.9e-94 350.5 474 48.7
Oeu055079.1 Olea europaea HOM05D005042 ORTHO05D006080 1.6e-85 320.9 489 46.4
Cc11_g11610 Coffea canephora HOM05D005042 ORTHO05D006080 6.5e-79 298.9 596 37.9
Dinv34024 Davidia involucrata HOM05D005042 ORTHO05D006080 3.1e-73 280.0 695 34.0
CSS0000751 Camellia sinensis var. sinensis HOM05D005042 ORTHO05D006080 4.5e-72 276.2 700 34.7
Peaxi162Scf00188g01341 Petunia axillaris HOM05D005042 ORTHO05D006080 6.5e-71 272.3 531 42.0
Sopen05g006670 Solanum pennellii HOM05D005042 ORTHO05D006080 1.1e-70 271.6 542 39.9
PGSC0003DMG400028304 Solanum tuberosum HOM05D005042 ORTHO05D006080 1.4e-70 271.2 543 40.9
SGA_v2.0_scaffold287G47187 Striga asiatica HOM05D005042 ORTHO05D006080 9.4e-70 268.5 627 34.4
Solyc05g011930.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.2e-69 268.1 542 39.5
CAN.G1021.3 Capsicum annuum HOM05D005042 ORTHO05D006080 6.1e-69 265.8 539 40.6
Lsat_1_v5_gn_3_106381 Lactuca sativa HOM05D005042 ORTHO05D006080 2.3e-68 263.8 456 42.8
HanXRQChr17g0570091 Helianthus annuus HOM05D005042 ORTHO05D006080 3.3e-67 260.0 451 41.5
Lj3A1027T86 Lonicera japonica HOM05D005042 ORTHO05D006080 5.7e-67 259.2 660 35.0
Rhsim12G0071400 Rhododendron simsii HOM05D005042 ORTHO05D006080 1.1e-65 255.0 579 35.8
ECA246G3902 Erigeron canadensis HOM05D005042 ORTHO05D006080 1.2e-64 251.5 524 39.1
vmacro01299 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 2.6e-64 250.4 603 35.0
CiPaw.06G094600 Carya illinoinensis HOM05D005042 ORTHO05D006080 3.0e-60 236.9 645 33.3
Nitab4.5_0012072g0010 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.1e-59 235.0 663 34.4
Cfa008851 Carpinus fangiana HOM05D005042 ORTHO05D006080 8.2e-58 228.8 715 32.0
Prupe.1G292900 Prunus persica HOM05D005042 ORTHO05D006080 2.4e-57 227.3 656 35.5
Eucgr.G02425 Eucalyptus grandis HOM05D005042 ORTHO05D006080 3.1e-57 226.9 523 35.4
CiPaw.05G122400 Carya illinoinensis HOM05D005042 ORTHO05D006080 2.9e-55 220.3 691 31.7
Haze_11871 Corylus avellana HOM05D005042 ORTHO05D006080 6.5e-55 219.2 708 32.9
Actinidia07770 Actinidia chinensis HOM05D005042 ORTHO05D006080 8.5e-55 218.8 671 30.8
Dinv15584 Davidia involucrata HOM05D000485 ORTHO05D000341 1.2e-53 214.9 239 52.3
Nitab4.5_0000027g0180 Nicotiana tabacum HOM05D005042 ORTHO05D006080 1.6e-53 214.5 673 32.7
TAR726G0003 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.7e-53 213.8 676 30.0
Hund25158 Selenicereus undatus HOM05D005042 ORTHO05D006080 8.0e-53 212.2 563 33.0
Nn4g23527 Nelumbo nucifera HOM05D005042 ORTHO05D006080 1.8e-52 211.1 650 35.7
vmacro10479 Vaccinium macrocarpon HOM05D005042 ORTHO05D006080 1.8e-52 211.1 708 29.8
CsaV3_6G033840 Cucumis sativus L. HOM05D005042 ORTHO05D006080 8.8e-52 208.8 430 37.9
Manes.01G025000 Manihot esculenta HOM05D005042 ORTHO05D006080 6.3e-50 202.6 653 28.6
Potri.008G109100 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.1e-49 201.8 685 30.7
Potri.T155180 Populus trichocarpa HOM05D005042 ORTHO05D006080 1.1e-49 201.8 685 30.7
unitig_62.g23700 Utricularia gibba HOM05D005042 ORTHO05D006080 1.1e-49 201.8 477 34.8
Thecc.02G323700 Theobroma cacao HOM05D005042 ORTHO05D006080 1.4e-49 201.4 621 33.7
MELO3C011406.2 Cucumis melo HOM05D005042 ORTHO05D006080 5.4e-49 199.5 430 37.4
MD16G1056300 Malus domestica HOM05D005042 ORTHO05D006080 7.0e-49 199.1 646 35.3
Rhsim09G0122700 Rhododendron simsii HOM05D005042 ORTHO05D006080 1.2e-48 198.4 741 29.0
TWI31G0262 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 5.0e-47 193.0 655 33.3
Duzib251G0840 Durio zibethinus HOM05D005042 ORTHO05D006080 1.1e-46 191.8 610 33.3
EL10Ac6g14684 Beta vulgaris HOM05D005042 ORTHO05D006080 1.9e-46 191.0 564 31.2
ClCG08G010560 Citrullus lanatus HOM05D005042 ORTHO05D006080 5.5e-46 189.5 465 35.1
MD13G1056900 Malus domestica HOM05D005042 ORTHO05D006080 2.7e-45 187.2 641 33.4
MBI16_g07040_MAGBIO Magnolia biondii HOM05D005042 ORTHO05D006080 8.0e-45 185.7 607 32.5
Potri.010G139100 Populus trichocarpa HOM05D005042 ORTHO05D006080 2.3e-44 184.1 714 28.9
GSVIVG01012257001 Vitis vinifera HOM05D005042 ORTHO05D006080 5.2e-44 183.0 612 34.2
DCAR_007205 Daucus carota HOM05D005042 ORTHO05D006080 8.8e-44 182.2 484 37.0
Gohir.A05G306900 Gossypium hirsutum HOM05D005042 ORTHO05D006080 7.5e-43 179.1 611 33.9
DCAR_030054 Daucus carota HOM05D005042 ORTHO05D006080 9.8e-43 178.7 464 38.4
TWI79G1206 Tripterygium wilfordii HOM05D005042 ORTHO05D006080 9.8e-43 178.7 657 32.0
CANSAT11G1456 Cannabis sativa HOM05D005042 ORTHO05D006080 3.7e-42 176.8 169 59.8
Gohir.D05G307200 Gossypium hirsutum HOM05D005042 ORTHO05D006080 3.7e-42 176.8 607 34.1
Gorai.009G327100 Gossypium raimondii HOM05D005042 ORTHO05D006080 6.3e-42 176.0 607 34.1
Cpa.g.sc1.165 Carica papaya HOM05D005042 ORTHO05D006080 4.1e-41 173.3 642 28.8
Phvul.003G038600 Phaseolus vulgaris HOM05D005042 ORTHO05D006080 1.2e-40 171.8 557 32.3
Sabra08G0082800 Salix brachista HOM05D005042 ORTHO05D006080 7.7e-40 169.1 694 31.3
Ca_05058_v3 Cicer arietinum L. HOM05D005042 ORTHO05D006080 1.3e-39 168.3 466 32.6
Sc04g0007390 Simmondsia chinensis HOM05D005042 ORTHO05D006080 2.9e-39 167.2 571 34.3
TAR629G0517 Trochodendron aralioides HOM05D005042 ORTHO05D006080 3.8e-39 166.8 712 30.1
Atru.chr11.1578 Acer truncatum HOM05D005042 ORTHO05D006080 5.0e-39 166.4 722 28.8
AUR62007879 Chenopodium quinoa HOM05D005042 ORTHO05D006080 8.6e-39 165.6 434 32.5
CDE10G0431 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 1.2e-37 161.8 547 32.0
Lj2g0019338 Lotus japonicus HOM05D005042 ORTHO05D006080 1.2e-37 161.8 170 65.3
Aqoxy3G03731 Aquilegia oxysepala HOM05D005042 ORTHO05D006080 3.6e-37 160.2 169 65.7
ECA234G0547 Erigeron canadensis HOM05D005042 ORTHO05D006080 1.4e-36 158.3 442 36.9
Glyma.02G122200 Glycine max HOM05D005042 ORTHO05D006080 1.4e-36 158.3 167 64.1
Solyc05g011950.3 Solanum lycopersicum HOM05D005042 ORTHO05D006080 1.4e-36 158.3 168 53.6
Lalb_Chr17g0341431 Lupinus albus HOM05D005042 ORTHO05D006080 3.0e-36 157.1 165 57.6
Ciclev10030834m.g Citrus clementina HOM05D005042 ORTHO05D006080 5.2e-36 156.4 707 29.3
TPR.G38503 Trifolium pratense HOM05D005042 ORTHO05D006080 2.0e-35 154.5 464 31.0
TAR371G1247 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.0e-35 154.5 170 54.1
AUR62003064 Chenopodium quinoa HOM05D005042 ORTHO05D006080 4.4e-35 153.3 490 31.0
COL.COLO4_27836 Corchorus olitorius HOM05D005042 ORTHO05D006080 6.3e-34 149.4 171 52.6
ATR0827G068 Amborella trichopoda HOM05D005042 ORTHO05D006080 1.4e-33 148.3 170 55.9
PGR119G2532 Punica granatum HOM05D005042 ORTHO05D006080 1.4e-33 148.3 641 31.8
Aa31LG4G11790 Aethionema arabicum HOM05D005042 ORTHO05D006080 1.8e-33 147.9 597 28.0
Lalb_Chr10g0099121 Lupinus albus HOM05D005042 ORTHO05D006080 7.0e-33 146.0 373 41.3
THA.LOC104821992 Tarenaya hassleriana HOM05D005042 ORTHO05D006080 7.0e-33 146.0 600 29.2
Carub.0002s1568 Capsella rubella HOM05D005042 ORTHO05D006080 1.6e-32 144.8 562 31.3
CAN.G1021.10 Capsicum annuum HOM05D005042 ORTHO05D006080 2.7e-32 144.1 174 49.4
Psat2g093520 Pisum sativum HOM05D005042 ORTHO05D006080 2.3e-31 141.0 216 50.9
TPR.G37754 Trifolium pratense HOM05D005042 ORTHO05D006080 2.9e-31 140.6 522 28.5
PSO478G2238 Papaver somniferum HOM05D005042 ORTHO05D006080 6.6e-31 139.4 166 50.0
arahy.Tifrunner.gnm1.ann1.U4ZHW1 Arachis hypogaea HOM05D005042 ORTHO05D006080 1.9e-30 137.9 179 56.4
PSO017G3437 Papaver somniferum HOM05D005042 ORTHO05D006080 1.9e-30 137.9 555 27.6
TAR371G1032 Trochodendron aralioides HOM05D005042 ORTHO05D006080 2.5e-30 137.5 253 37.9
PSO063G2731 Papaver somniferum HOM05D005042 ORTHO05D006080 3.3e-30 137.1 593 31.2
COL.COLO4_27818 Corchorus olitorius HOM05D005042 ORTHO05D006080 5.6e-30 136.3 613 28.5
AT1G69060 Arabidopsis thaliana HOM05D005042 ORTHO05D006080 9.5e-30 135.6 627 28.7
Sopen05g006680 Solanum pennellii HOM05D000061 ORTHO05D000050 2.8e-29 134.0 154 51.3
Glyma.01G064400 Glycine max HOM05D005042 ORTHO05D006080 4.7e-29 133.3 164 64.6
FAN22G1919 Fragaria x ananassa HOM05D005042 ORTHO05D006080 6.2e-29 132.9 652 31.0
TPR.G34179 Trifolium pratense HOM05D005042 ORTHO05D006080 6.2e-29 132.9 167 54.5
FAN07G1705 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.8e-28 131.3 650 30.6
PSO782G3512 Papaver somniferum HOM05D005042 ORTHO05D006080 2.3e-28 131.0 593 31.4
HPP92_000883 Vanilla planifolia HOM05D005042 ORTHO05D006080 2.3e-28 131.0 600 28.7
QL05p008217 Quercus lobata HOM05D005042 ORTHO05D006080 3.1e-28 130.6 177 45.8
Sp5g24160 Schrenkiella parvula HOM05D005042 ORTHO05D006080 3.1e-28 130.6 576 29.9
Thhalv10018302m.g Eutrema salsugineum HOM05D005042 ORTHO05D006080 6.8e-28 129.4 611 30.3
HanXRQChr16g0527171 Helianthus annuus HOM05D005042 ORTHO05D006080 8.9e-28 129.0 170 60.6
RcHm_v2.0_Chr4g0437421 Rosa chinensis HOM05D005042 ORTHO05D006080 8.9e-28 129.0 676 28.7
Lsat_1_v5_gn_4_25561 Lactuca sativa HOM05D005042 ORTHO05D006080 4.4e-27 126.7 442 26.9
Sabra10G0107300 Salix brachista HOM05D005042 ORTHO05D006080 5.8e-27 126.3 659 26.3
CARHR061940 Cardamine hirsuta HOM05D005042 ORTHO05D006080 1.9e-25 121.3 160 58.8
FAN12G1549 Fragaria x ananassa HOM05D005042 ORTHO05D006080 1.9e-25 121.3 171 62.0
SEGI_40784 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 2.4e-25 120.9 372 31.7
FAN17G2893 Fragaria x ananassa HOM05D005042 ORTHO05D006080 5.4e-25 119.8 637 30.5
VMungo1215G3453 Vigna mungo HOM05D005042 ORTHO05D006080 1.6e-24 118.2 134 52.2
Ah.03g138660 Amaranthus hybridus HOM05D000485 ORTHO05D000341 2.7e-24 117.5 165 58.2
FvH4_4g29350 Fragaria vesca HOM05D005042 ORTHO05D006080 1.3e-23 115.2 633 30.6
SEGI_37091 Sequoiadendron giganteum HOM05D005042 ORTHO05D006080 1.3e-23 115.2 166 49.4
Zm00001eb057530 Zea mays HOM05D005042 ORTHO05D006080 1.7e-23 114.8 172 57.0
CAN.G1021.18 Capsicum annuum HOM05D005042 ORTHO05D006080 3.9e-23 113.6 152 43.4
arahy.Tifrunner.gnm1.ann1.L0BNS4 Arachis hypogaea HOM05D005042 ORTHO05D006080 5.0e-23 113.2 96 60.4
Sed0017498 Sechium edule HOM05D005042 ORTHO05D006080 6.6e-23 112.8 388 30.2
CDE10G0071 Ceratophyllum demersum HOM05D005042 ORTHO05D006080 8.6e-23 112.5 95 61.1
Medtr5g047140 Medicago truncatula HOM05D005042 ORTHO05D006080 1.5e-22 111.7 168 43.5
Pp3c2_29040 Physcomitrium patens HOM05D005042 ORTHO05D006080 1.5e-22 111.7 170 49.4
AagrBONN_evm.TU.Sc2ySwM_117.2775 Anthoceros agrestis HOM05D005042 ORTHO05D006080 7.3e-22 109.4 170 41.8
Pp3c1_680 Physcomitrium patens HOM05D005042 ORTHO05D006080 7.3e-22 109.4 172 41.3
DCAR_023741 Daucus carota HOM05D005042 ORTHO05D006080 9.5e-22 109.0 94 61.7
Mapoly0211s0012 Marchantia polymorpha HOM05D005042 ORTHO05D006080 1.6e-21 108.2 216 47.2
Os03g0752700 Oryza sativa ssp. japonica HOM05D005042 ORTHO05D006080 8.1e-21 105.9 170 55.3
CAN.G1021.19 Capsicum annuum HOM05D005042 ORTHO05D006080 1.8e-20 104.8 151 51.0
Nn3g17525 Nelumbo nucifera HOM05D005042 ORTHO05D006080 8.9e-20 102.4 229 35.8
AL2G28110 Arabidopsis lyrata HOM05D005042 ORTHO05D006080 9.8e-19 99.0 625 27.4
PGSC0003DMG400028305 Solanum tuberosum HOM05D005042 ORTHO05D006080 9.8e-19 99.0 88 60.2
CAN.G1021.24 Capsicum annuum HOM05D005042 ORTHO05D006080 1.3e-18 98.6 133 54.1
CAN.G1021.20 Capsicum annuum HOM05D005042 ORTHO05D006080 1.7e-18 98.2 151 43.0
Solyc05g011960.4 Solanum lycopersicum HOM05D005042 ORTHO05D006080 8.3e-18 95.9 88 56.8
Dinv15585 Davidia involucrata HOM05D005042 ORTHO05D006080 1.1e-17 95.5 70 68.6
C06p40780 Brassica napus HOM05D005042 ORTHO05D006080 3.2e-17 94.0 166 50.0
BolC6t39355H Brassica oleracea HOM05D005042 ORTHO05D006080 3.2e-17 94.0 166 50.0
Sopen05g006700 Solanum pennellii HOM05D005042 ORTHO05D006080 5.4e-17 93.2 88 54.5
BraA07t31136Z Brassica rapa HOM05D005042 ORTHO05D006080 2.1e-16 91.3 166 50.0
Manes.14G088800 Manihot esculenta HOM05D005042 ORTHO05D006080 7.8e-16 89.4 354 29.9
CBR_g19648 Chara braunii HOM05D005042 ORTHO05D006080 2.8e-13 80.9 98 46.9
A07p35450 Brassica napus HOM05D005042 ORTHO05D006080 3.1e-12 77.4 650 25.4


User provided reference genes

Program Settings