Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021775.1 Olea europaea HOM05D003170 ORTHO05D003611 3.8e-67 258.1 135 100.0
Oeu061639.1 Olea europaea HOM05D003170 ORTHO05D003611 1.4e-56 223.0 135 88.9
MSTRG.8749 Avicennia marina HOM05D003170 ORTHO05D003611 4.1e-37 158.3 142 64.8
Nitab4.5_0000716g0230 Nicotiana tabacum HOM05D003170 ORTHO05D003611 1.7e-35 152.9 132 68.9
Nitab4.5_0001508g0020 Nicotiana tabacum HOM05D003170 ORTHO05D003611 1.2e-33 146.7 130 67.7
CAN.G1704.1 Capsicum annuum HOM05D003170 ORTHO05D003611 1.6e-33 146.4 135 63.7
Migut.F00355 Erythranthe guttata HOM05D003170 ORTHO05D003611 1.1e-32 143.7 138 63.8
Lj4A278T49 Lonicera japonica HOM05D003170 ORTHO05D003611 2.4e-32 142.5 136 63.2
PGSC0003DMG400014326 Solanum tuberosum HOM05D003170 ORTHO05D003611 2.4e-32 142.5 134 63.4
Lj4A278T48 Lonicera japonica HOM05D003170 ORTHO05D003611 4.0e-32 141.7 136 61.8
Solyc03g025980.3 Solanum lycopersicum HOM05D003170 ORTHO05D003611 5.2e-32 141.4 130 62.3
Sopen03g004800 Solanum pennellii HOM05D003170 ORTHO05D003611 2.0e-31 139.4 130 61.5
Haze_13733 Corylus avellana HOM05D003170 ORTHO05D003611 2.6e-31 139.0 153 59.5
Prupe.2G292500 Prunus persica HOM05D003170 ORTHO05D003611 1.7e-30 136.3 148 60.1
TAR374G0603 Trochodendron aralioides HOM05D003170 ORTHO05D003611 1.7e-30 136.3 133 61.7
CiPaw.03G104800 Carya illinoinensis HOM05D003170 ORTHO05D003611 2.9e-30 135.6 151 58.3
Manes.14G027300 Manihot esculenta HOM05D003170 ORTHO05D003611 3.8e-30 135.2 150 60.0
MSTRG.8449 Avicennia marina HOM05D003170 ORTHO05D003611 1.9e-29 132.9 148 60.8
CiPaw.04G065700 Carya illinoinensis HOM05D003170 ORTHO05D003611 1.9e-29 132.9 154 54.5
Dinv35200 Davidia involucrata HOM05D003170 ORTHO05D003611 2.4e-29 132.5 150 60.0
Hma1.2p1_2094F.1_g313950 Hydrangea macrophylla HOM05D003170 ORTHO05D003611 7.1e-29 131.0 143 60.8
CSS0039374 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 2.7e-28 129.0 148 60.1
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 6.0e-28 127.9 108 70.4
Thecc.03G174600 Theobroma cacao HOM05D003170 ORTHO05D003611 6.0e-28 127.9 144 59.0
Hund04727 Selenicereus undatus HOM05D003170 ORTHO05D003611 7.8e-28 127.5 129 61.2
TWI39G0473 Tripterygium wilfordii HOM05D003170 ORTHO05D003611 7.8e-28 127.5 130 60.8
Actinidia32873 Actinidia chinensis HOM05D003170 ORTHO05D003611 2.3e-27 125.9 150 58.7
Aqoxy7G00394 Aquilegia oxysepala HOM05D003170 ORTHO05D003611 2.3e-27 125.9 140 55.0
CSS0015678 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 2.3e-27 125.9 149 60.4
PGR042G1969 Punica granatum HOM05D003170 ORTHO05D003611 3.9e-27 125.2 141 58.9
AUR62021211 Chenopodium quinoa HOM05D003170 ORTHO05D003611 5.1e-27 124.8 135 57.0
Dinv28458 Davidia involucrata HOM05D003170 ORTHO05D003611 5.1e-27 124.8 143 56.6
TWI23G0489 Tripterygium wilfordii HOM05D003170 ORTHO05D003611 5.1e-27 124.8 129 59.7
Nitab4.5_0014916g0010 Nicotiana tabacum HOM05D003170 ORTHO05D003611 6.6e-27 124.4 136 55.1
TAR629G1853 Trochodendron aralioides HOM05D003170 ORTHO05D003611 1.1e-26 123.6 133 60.2
TWI14G0563 Tripterygium wilfordii HOM05D003170 ORTHO05D003611 9.6e-26 120.6 148 57.4
Lj2g0008178 Lotus japonicus HOM05D003170 ORTHO05D003611 2.1e-25 119.4 148 55.4
Hund11760 Selenicereus undatus HOM05D003170 ORTHO05D003611 2.1e-25 119.4 128 57.0
Hund28786 Selenicereus undatus HOM05D003170 ORTHO05D003611 2.1e-25 119.4 128 57.0
EL10Ac3g05670 Beta vulgaris HOM05D003170 ORTHO05D003611 3.6e-25 118.6 136 55.9
Duzib205G1559 Durio zibethinus HOM05D003170 ORTHO05D003611 3.6e-25 118.6 145 57.9
SalBow2G0654 Salvia bowleyana HOM05D003170 ORTHO05D003611 6.2e-25 117.9 140 55.0
DCAR_018189 Daucus carota HOM05D003170 ORTHO05D003611 8.1e-25 117.5 102 66.7
Ah.08g214090 Amaranthus hybridus HOM05D003170 ORTHO05D003611 1.1e-24 117.1 137 56.2
CSS0022669 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 1.1e-24 117.1 131 61.8
Phvul.004G118600 Phaseolus vulgaris HOM05D003170 ORTHO05D003611 1.1e-24 117.1 136 54.4
SGA_v2.0_scaffold10G05362 Striga asiatica HOM05D003170 ORTHO05D003611 1.4e-24 116.7 147 54.4
Potri.015G140500 Populus trichocarpa HOM05D003170 ORTHO05D003611 1.8e-24 116.3 144 56.9
Cpa.g.sc107.34 Carica papaya HOM05D003170 ORTHO05D003611 2.4e-24 115.9 130 53.8
Nitab4.5_0001600g0020 Nicotiana tabacum HOM05D003170 ORTHO05D003611 2.4e-24 115.9 130 55.4
CSS0042797 Camellia sinensis var. sinensis HOM05D003170 ORTHO05D003611 3.1e-24 115.5 131 61.1
QL09p014578 Quercus lobata HOM05D003170 ORTHO05D003611 3.1e-24 115.5 138 53.6
Peaxi162Scf00132g01511 Petunia axillaris HOM05D003170 ORTHO05D003611 5.3e-24 114.8 134 53.7
MD07G1266900 Malus domestica HOM05D003170 ORTHO05D003611 6.9e-24 114.4 131 58.0
Cc02_g03170 Coffea canephora HOM05D003170 ORTHO05D003611 9.0e-24 114.0 131 61.8
Duzib084G1425 Durio zibethinus HOM05D003170 ORTHO05D003611 9.0e-24 114.0 133 58.6
Rhsim03G0179100 Rhododendron simsii HOM05D003170 ORTHO05D003611 1.5e-23 113.2 146 54.1
Sabra15G0151100 Salix brachista HOM05D003170 ORTHO05D003611 1.5e-23 113.2 149 55.0
Nn6g34195 Nelumbo nucifera HOM05D003170 ORTHO05D003611 2.0e-23 112.8 128 53.9
VMungo0464G1052 Vigna mungo HOM05D003170 ORTHO05D003611 2.6e-23 112.5 147 53.1
CAN.G166.6 Capsicum annuum HOM05D003170 ORTHO05D003611 3.4e-23 112.1 132 56.1
Lalb_Chr19g0130961 Lupinus albus HOM05D003170 ORTHO05D003611 3.4e-23 112.1 150 50.0
Eucgr.K00241 Eucalyptus grandis HOM05D003170 ORTHO05D003611 5.8e-23 111.3 135 53.3
PSO782G4582 Papaver somniferum HOM05D003170 ORTHO05D003611 5.8e-23 111.3 135 51.1
MELO3C005380.2 Cucumis melo HOM05D003170 ORTHO05D003611 7.6e-23 110.9 143 53.1
Duzib068G0533 Durio zibethinus HOM05D003170 ORTHO05D003611 7.6e-23 110.9 144 56.2
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 1.3e-22 110.2 146 52.7
Ciclev10006977m.g Citrus clementina HOM05D003170 ORTHO05D003611 1.3e-22 110.2 150 52.7
Glyma.16G195400 Glycine max HOM05D003170 ORTHO05D003611 1.3e-22 110.2 147 52.4
Sabra12G0104000 Salix brachista HOM05D003170 ORTHO05D003611 2.2e-22 109.4 132 57.6
Glyma.09G142100 Glycine max HOM05D003170 ORTHO05D003611 4.9e-22 108.2 144 51.4
GSVIVG01010550001 Vitis vinifera HOM05D003170 ORTHO05D003611 8.4e-22 107.5 145 51.0
Potri.012G138600 Populus trichocarpa HOM05D003170 ORTHO05D003611 1.1e-21 107.1 144 54.2
Hma1.2p1_0270F.1_g108200 Hydrangea macrophylla HOM05D003170 ORTHO05D003611 2.4e-21 105.9 132 55.3
MD01G1199100 Malus domestica HOM05D003170 ORTHO05D003611 3.2e-21 105.5 154 50.6
Psat0ss2830g0120 Pisum sativum HOM05D003170 ORTHO05D003611 7.1e-21 104.4 149 51.0
Gorai.004G119500 Gossypium raimondii HOM05D003170 ORTHO05D003611 9.3e-21 104.0 138 57.2
CsaV3_5G005730 Cucumis sativus L. HOM05D003170 ORTHO05D003611 1.2e-20 103.6 118 55.9
Gohir.D08G111500 Gossypium hirsutum HOM05D003170 ORTHO05D003611 1.2e-20 103.6 138 57.2
Sc25g0000430 Simmondsia chinensis HOM05D003170 ORTHO05D003611 1.2e-20 103.6 139 51.8
vmacro06699 Vaccinium macrocarpon HOM05D003170 ORTHO05D003611 2.1e-20 102.8 142 51.4
AUR62016003 Chenopodium quinoa HOM05D003170 ORTHO05D003611 3.5e-20 102.1 136 53.7
Ca_06615_v3 Cicer arietinum L. HOM05D003170 ORTHO05D003611 4.6e-20 101.7 150 52.0
Migut.F01132 Erythranthe guttata HOM05D003170 ORTHO05D003611 4.6e-20 101.7 134 49.3
Gohir.A08G100333 Gossypium hirsutum HOM05D003170 ORTHO05D003611 6.0e-20 101.3 138 55.8
DCAR_020240 Daucus carota HOM05D003170 ORTHO05D003611 7.9e-20 100.9 131 53.4
Medtr0022s0300 Medicago truncatula HOM05D003170 ORTHO05D003611 1.0e-19 100.5 149 49.0
arahy.Tifrunner.gnm1.ann1.UE8RN5 Arachis hypogaea HOM05D003170 ORTHO05D003611 3.0e-19 99.0 152 47.4
ATR0757G045 Amborella trichopoda HOM05D003170 ORTHO05D003611 6.7e-19 97.8 135 52.6
PGR142G3131 Punica granatum HOM05D003170 ORTHO05D003611 8.7e-19 97.4 137 53.3
Sed0024024 Sechium edule HOM05D003170 ORTHO05D003611 8.7e-19 97.4 133 51.9
Atru.chr1.481 Acer truncatum HOM05D003170 ORTHO05D003611 1.1e-18 97.1 149 50.3
CANSAT21G1030 Cannabis sativa HOM05D003170 ORTHO05D003611 1.1e-18 97.1 112 56.2
Sp7g23560 Schrenkiella parvula HOM05D003170 ORTHO05D003611 1.9e-18 96.3 132 51.5
PGSC0003DMG400010855 Solanum tuberosum HOM05D003170 ORTHO05D003611 1.9e-18 96.3 127 51.2
Gorai.006G047800 Gossypium raimondii HOM05D003170 ORTHO05D003611 3.3e-18 95.5 141 51.8
arahy.Tifrunner.gnm1.ann1.HMB1PX Arachis hypogaea HOM05D003170 ORTHO05D003611 4.3e-18 95.1 154 46.8
Nn1g01407 Nelumbo nucifera HOM05D003170 ORTHO05D003611 4.3e-18 95.1 120 49.2
Lalb_Chr01g0009211 Lupinus albus HOM05D003170 ORTHO05D003611 5.6e-18 94.7 151 48.3
HPP92_016063 Vanilla planifolia HOM05D003170 ORTHO05D003611 5.6e-18 94.7 135 48.9
Lsat_1_v5_gn_0_29780 Lactuca sativa HOM05D003170 ORTHO05D003611 7.4e-18 94.4 153 47.1
unitig_0.g2485 Utricularia gibba HOM05D003170 ORTHO05D003611 7.4e-18 94.4 133 51.1
Rhsim01G0180500 Rhododendron simsii HOM05D003170 ORTHO05D003611 9.6e-18 94.0 129 55.0
TPR.G10770 Trifolium pratense HOM05D003170 ORTHO05D003611 1.3e-17 93.6 148 47.3
Gohir.D09G041500 Gossypium hirsutum HOM05D003170 ORTHO05D003611 1.6e-17 93.2 141 51.1
Actinidia31814 Actinidia chinensis HOM05D003170 ORTHO05D003611 2.1e-17 92.8 103 60.2
Solyc01g009610.3 Solanum lycopersicum HOM05D003170 ORTHO05D003611 2.8e-17 92.4 127 49.6
PSO478G4201 Papaver somniferum HOM05D003170 ORTHO05D003611 6.2e-17 91.3 170 40.0
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 1.8e-16 89.7 127 47.2
Carub.0007s1545 Capsella rubella HOM05D003170 ORTHO05D003611 3.1e-16 89.0 131 48.1
Lsat_1_v5_gn_5_1720 Lactuca sativa HOM05D003170 ORTHO05D003611 3.1e-16 89.0 134 50.0
Sp6g14450 Schrenkiella parvula HOM05D003170 ORTHO05D003611 3.1e-16 89.0 128 49.2
CiPaw.16G095000 Carya illinoinensis HOM05D003170 ORTHO05D003611 4.0e-16 88.6 94 59.6
THA.LOC104800259 Tarenaya hassleriana HOM05D003170 ORTHO05D003611 4.0e-16 88.6 100 55.0
MBI04_g04732_MAGBIO Magnolia biondii HOM05D003170 ORTHO05D003611 5.3e-16 88.2 134 48.5
TAR375G0255 Trochodendron aralioides HOM05D003170 ORTHO05D003611 6.9e-16 87.8 135 45.2
vmacro09842 Vaccinium macrocarpon HOM05D003170 ORTHO05D003611 1.5e-15 86.7 127 52.0
Thhalv10014782m.g Eutrema salsugineum HOM05D003170 ORTHO05D003611 2.0e-15 86.3 140 44.3
Os05g0301600 Oryza sativa ssp. japonica HOM05D003170 ORTHO05D003611 2.0e-15 86.3 131 42.7
ECA233G1278 Erigeron canadensis HOM05D003170 ORTHO05D003611 2.6e-15 85.9 131 46.6
Lsat_1_v5_gn_2_10280 Lactuca sativa HOM05D003170 ORTHO05D003611 2.6e-15 85.9 133 48.9
Actinidia03117 Actinidia chinensis HOM05D003170 ORTHO05D003611 5.8e-15 84.7 153 45.8
Haze_08928 Corylus avellana HOM05D003170 ORTHO05D003611 1.7e-14 83.2 130 44.6
HanXRQChr14g0462211 Helianthus annuus HOM05D003170 ORTHO05D003611 1.7e-14 83.2 129 47.3
CARHR232950 Cardamine hirsuta HOM05D003170 ORTHO05D003611 2.9e-14 82.4 134 45.5
Sed0003103 Sechium edule HOM05D003170 ORTHO05D003611 3.8e-14 82.0 131 48.9
Gohir.D09G175400 Gossypium hirsutum HOM05D003170 ORTHO05D003611 6.4e-14 81.3 126 50.0
Gorai.006G197500 Gossypium raimondii HOM05D003170 ORTHO05D003611 6.4e-14 81.3 126 50.0
Aa31LG3G8580 Aethionema arabicum HOM05D003170 ORTHO05D003611 1.1e-13 80.5 119 44.5
A10p09900 Brassica napus HOM05D003170 ORTHO05D003611 9.3e-13 77.4 143 43.4
Lsat_1_v5_gn_8_66160 Lactuca sativa HOM05D003170 ORTHO05D003611 9.3e-13 77.4 122 45.9
Lsat_1_v5_gn_8_6760 Lactuca sativa HOM05D003170 ORTHO05D003611 9.3e-13 77.4 103 50.5
Ciclev10022533m.g Citrus clementina HOM05D003170 ORTHO05D003611 1.6e-12 76.6 127 44.9
HanXRQChr13g0395671 Helianthus annuus HOM05D003170 ORTHO05D003611 1.6e-12 76.6 131 43.5
Thhalv10026333m.g Eutrema salsugineum HOM05D003170 ORTHO05D003611 2.1e-12 76.3 120 45.8
Zm00001eb304110 Zea mays HOM05D003170 ORTHO05D003611 3.5e-12 75.5 114 47.4
arahy.Tifrunner.gnm1.ann1.XVLL42 Arachis hypogaea HOM05D003170 ORTHO05D003611 4.6e-12 75.1 121 47.9
Gohir.A09G040930 Gossypium hirsutum HOM05D003170 ORTHO05D003611 6.0e-12 74.7 151 43.7
FAN03G0230 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.0e-11 73.9 102 51.0
FAN03G3472 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.0e-11 73.9 102 51.0
FAN10G1156 Fragaria x ananassa HOM05D003170 ORTHO05D003611 1.0e-11 73.9 102 51.0
Duzib205G0251 Durio zibethinus HOM05D003170 ORTHO05D003611 1.8e-11 73.2 133 39.8
QL12p017686 Quercus lobata HOM05D003170 ORTHO05D003611 1.8e-11 73.2 131 41.2
Sopen01g005140 Solanum pennellii HOM05D003170 ORTHO05D003611 1.8e-11 73.2 77 58.4
FvH4_7g29250 Fragaria vesca HOM05D003170 ORTHO05D003611 2.3e-11 72.8 94 53.2
FAN06G4027 Fragaria x ananassa HOM05D003170 ORTHO05D003611 2.3e-11 72.8 94 53.2
FAN06G4666 Fragaria x ananassa HOM05D003170 ORTHO05D003611 2.3e-11 72.8 94 53.2
Lsat_1_v5_gn_0_10360 Lactuca sativa HOM05D003170 ORTHO05D003611 2.3e-11 72.8 108 51.9
FAN01G0494 Fragaria x ananassa HOM05D003170 ORTHO05D003611 3.0e-11 72.4 115 47.0
Phvul.007G068200 Phaseolus vulgaris HOM05D003170 ORTHO05D003611 6.7e-11 71.2 122 38.5
Lsat_1_v5_gn_2_26501 Lactuca sativa HOM05D003170 ORTHO05D003611 4.3e-10 68.6 134 44.8
ECA238G0732 Erigeron canadensis HOM05D003170 ORTHO05D003611 5.6e-10 68.2 132 42.4
BcaC06g32804 Brassica carinata HOM05D001175 ORTHO05D003020 9.6e-10 67.4 105 48.6
A03p56070 Brassica napus HOM05D001061 ORTHO05D006729 9.6e-10 67.4 97 48.5
BolC7t45924H Brassica oleracea HOM05D003170 ORTHO05D003611 9.6e-10 67.4 97 48.5
Lsat_1_v5_gn_2_66880 Lactuca sativa HOM05D003170 ORTHO05D003611 9.6e-10 67.4 147 40.1
arahy.Tifrunner.gnm1.ann1.NN7C7R Arachis hypogaea HOM05D003170 ORTHO05D003611 1.3e-09 67.0 115 46.1
C07p54390 Brassica napus HOM05D001061 ORTHO05D006729 2.1e-09 66.2 97 47.4
Glyma.20G157200 Glycine max HOM05D003170 ORTHO05D003611 2.8e-09 65.9 123 40.7
Lsat_1_v5_gn_9_89540 Lactuca sativa HOM05D003170 ORTHO05D003611 2.8e-09 65.9 131 43.5
VMungo0720G1110 Vigna mungo HOM05D003170 ORTHO05D003611 2.8e-09 65.9 102 42.2
Medtr1g100747 Medicago truncatula HOM05D003170 ORTHO05D003611 3.7e-09 65.5 127 40.2
BcaB08g35572 Brassica carinata HOM05D003170 ORTHO05D003611 4.8e-09 65.1 102 48.0
Lsat_1_v5_gn_8_63220 Lactuca sativa HOM05D003170 ORTHO05D003611 4.8e-09 65.1 108 48.1
AT5G52200 Arabidopsis thaliana HOM05D003170 ORTHO05D003611 1.1e-08 63.9 105 42.9
Carub.0008s1229 Capsella rubella HOM05D003170 ORTHO05D003611 1.4e-08 63.5 99 44.4
CDE04G2040 Ceratophyllum demersum HOM05D003170 ORTHO05D003611 2.4e-08 62.8 138 41.3
AL8G26580 Arabidopsis lyrata HOM05D003170 ORTHO05D003611 5.3e-08 61.6 103 43.7
BcaB01g04192 Brassica carinata HOM05D003170 ORTHO05D003611 5.3e-08 61.6 103 44.7
HPP92_017209 Vanilla planifolia HOM05D003170 ORTHO05D003611 5.3e-08 61.6 104 45.2
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 9.0e-08 60.8 105 42.9
Glyma.10G237400 Glycine max HOM05D003170 ORTHO05D003611 9.0e-08 60.8 137 38.7
LjContig00238g0006434 Lotus japonicus HOM05D003170 ORTHO05D003611 1.2e-07 60.5 120 35.8
TPR.G14320 Trifolium pratense HOM05D003170 ORTHO05D003611 5.8e-07 58.2 121 37.2
Aa31sc165G60 Aethionema arabicum HOM05D003170 ORTHO05D003611 1.3e-06 57.0 126 35.7
RcHm_v2.0_Chr1g0377001 Rosa chinensis HOM05D003170 ORTHO05D003611 1.3e-06 57.0 102 45.1
CARHR265120 Cardamine hirsuta HOM05D003170 ORTHO05D003611 2.2e-06 56.2 111 39.6
Lsat_1_v5_gn_6_103800 Lactuca sativa HOM05D003170 ORTHO05D003611 3.8e-06 55.5 83 53.0
BcaC04g20603 Brassica carinata HOM05D003170 ORTHO05D003611 8.4e-06 54.3 104 38.5
C09p41610 Brassica napus HOM05D003170 ORTHO05D003611 8.4e-06 54.3 104 38.5
BolC9t57048H Brassica oleracea HOM05D003170 ORTHO05D003611 8.4e-06 54.3 104 38.5
Lsat_1_v5_gn_2_133800 Lactuca sativa HOM05D003170 ORTHO05D003611 8.4e-06 54.3 137 37.2


User provided reference genes

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