Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 1.4e-125 453.0 231 100.0
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 2.1e-57 226.5 226 60.2
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 3.1e-56 222.6 234 57.3
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 4.0e-56 222.2 228 57.5
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 5.8e-55 218.4 231 56.3
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 7.5e-55 218.0 236 56.8
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 1.7e-54 216.9 237 57.4
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 3.7e-54 215.7 231 55.8
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.4e-53 213.8 235 56.6
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 1.9e-53 213.4 233 55.4
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 2.4e-53 213.0 228 55.7
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 2.7e-52 209.5 232 55.6
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 2.7e-52 209.5 230 56.1
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 4.6e-52 208.8 240 55.0
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 1.3e-51 207.2 231 56.7
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 5.1e-51 205.3 232 55.6
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 4.7e-49 198.7 235 53.2
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 8.1e-49 198.0 234 51.7
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 3.1e-48 196.1 235 51.9
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 6.8e-48 194.9 235 53.2
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 6.8e-48 194.9 232 52.2
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 1.2e-47 194.1 229 51.5
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 1.2e-47 194.1 229 51.5
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 1.5e-47 193.7 235 52.8
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 1.5e-47 193.7 234 51.3
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 2.6e-47 193.0 224 54.9
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 2.6e-47 193.0 232 51.7
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 9.9e-47 191.0 239 51.5
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 3.8e-46 189.1 235 50.6
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 3.8e-46 189.1 235 50.6
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 3.8e-46 189.1 240 50.4
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 4.9e-46 188.7 230 52.6
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 4.9e-46 188.7 231 50.6
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 1.4e-45 187.2 235 50.6
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 1.4e-45 187.2 230 51.3
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 2.4e-45 186.4 233 50.6
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 4.2e-45 185.7 241 50.6
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 4.2e-45 185.7 230 51.3
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 7.1e-45 184.9 232 49.1
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 1.2e-44 184.1 242 51.7
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 4.6e-44 182.2 229 48.9
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 6.0e-44 181.8 232 48.7
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 1.0e-43 181.0 240 50.0
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.7e-43 180.3 232 48.3
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 1.7e-43 180.3 230 49.1
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 1.7e-43 180.3 232 47.8
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 1.7e-43 180.3 239 50.6
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 3.9e-43 179.1 234 50.9
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 5.1e-43 178.7 243 49.4
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 6.6e-43 178.3 241 49.4
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 3.3e-42 176.0 232 50.0
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 4.3e-42 175.6 232 50.4
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 4.3e-42 175.6 232 47.8
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 9.6e-42 174.5 229 49.3
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 1.6e-41 173.7 231 48.5
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 2.1e-41 173.3 170 60.6
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 2.1e-41 173.3 233 49.4
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 2.8e-41 172.9 228 49.6
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 6.2e-41 171.8 234 47.4
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 8.1e-41 171.4 232 49.1
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 1.1e-40 171.0 235 47.7
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 2.4e-40 169.9 234 48.7
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 3.1e-40 169.5 232 47.0
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.1e-40 169.5 232 47.0
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 5.3e-40 168.7 235 47.2
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 5.3e-40 168.7 238 49.6
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 1.2e-39 167.5 130 68.5
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 3.4e-39 166.0 232 47.0
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 5.8e-39 165.2 236 46.6
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 5.8e-39 165.2 232 47.0
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 1.3e-38 164.1 231 47.2
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 1.3e-38 164.1 234 46.6
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 1.7e-38 163.7 233 46.8
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 1.7e-38 163.7 238 45.0
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 2.2e-38 163.3 231 46.8
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 3.8e-38 162.5 232 46.6
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 3.8e-38 162.5 241 49.0
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 3.8e-38 162.5 240 46.2
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 1.1e-37 161.0 232 46.1
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 1.9e-37 160.2 238 45.8
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 2.4e-37 159.8 231 45.5
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 2.4e-37 159.8 230 47.4
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 3.2e-37 159.5 233 45.1
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 3.2e-37 159.5 233 45.1
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 7.1e-37 158.3 234 45.7
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.2e-36 157.5 233 45.9
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.2e-36 157.5 233 45.9
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 1.6e-36 157.1 208 48.1
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 3.5e-36 156.0 233 45.5
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 3.5e-36 156.0 231 45.5
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 7.8e-36 154.8 232 43.5
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 1.0e-35 154.5 227 45.8
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 2.3e-35 153.3 150 58.7
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 3.0e-35 152.9 230 46.1
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 6.6e-35 151.8 230 46.1
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 8.7e-35 151.4 253 43.1
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 8.1e-33 144.8 247 42.1
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 2.0e-31 140.2 230 42.6
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 2.6e-31 139.8 129 55.8
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 6.4e-30 135.2 238 41.6
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 8.4e-30 134.8 221 41.2
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 1.1e-29 134.4 235 45.1
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 3.2e-29 132.9 245 39.6
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 5.4e-29 132.1 240 40.4
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 2.7e-28 129.8 124 58.9
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 3.5e-28 129.4 137 53.3
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 4.6e-28 129.0 178 47.2
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 5.1e-27 125.6 230 40.9
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 1.5e-26 124.0 125 58.4
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.9e-26 123.6 182 46.2
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 2.5e-26 123.2 141 51.1
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 3.3e-26 122.9 271 38.4
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 3.3e-26 122.9 231 41.1
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 7.4e-26 121.7 238 38.7
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 9.6e-26 121.3 111 59.5
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 3.7e-25 119.4 208 40.9
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 4.8e-25 119.0 234 40.2
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 6.9e-24 115.2 237 38.0
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.5e-23 114.0 195 39.0
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 4.2e-21 105.9 254 35.8
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 5.5e-21 105.5 237 37.1
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.1e-20 103.6 136 49.3
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 1.0e-19 101.3 143 46.9
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 3.9e-19 99.4 92 54.3
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 5.8e-15 85.5 145 40.7
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 2.5e-13 80.1 84 50.0
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 1.2e-12 77.8 151 41.1
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.2e-12 77.8 105 41.9
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 1.8e-11 73.9 92 43.5
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.5e-10 70.9 55 74.5
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 7.4e-10 68.6 178 34.3
CARHR160590 Cardamine hirsuta HOM05D005654 ORTHO05D006438 9.7e-10 68.2 93 43.0
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 1.5e-07 60.8 130 35.4
FAN24G2610 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.5e-07 59.3 43 79.1
Zm00001eb372850 Zea mays HOM05D005654 ORTHO05D006438 1.7e-06 57.4 55 61.8
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 2.2e-06 57.0 130 34.6
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 2.2e-06 57.0 130 34.6
SHI15307 Sapria himalayana HOM05D005654 ORTHO05D006438 3.8e-06 56.2 119 36.1
SHI10625 Sapria himalayana HOM05D020241 ORTHO05D006438 6.5e-06 55.5 83 43.4
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 8.5e-06 55.1 41 61.0


User provided reference genes

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