Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 1.0e-110 403.3 185 100.0
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.1e-84 315.8 185 74.6
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 6.2e-84 314.3 187 73.3
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 1.7e-81 306.2 185 73.0
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 3.8e-81 305.1 185 74.1
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 8.4e-81 303.9 187 73.3
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 4.2e-80 301.6 185 74.6
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.6e-79 299.7 187 72.7
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.6e-79 299.7 186 74.7
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.5e-79 298.5 185 69.7
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 7.8e-79 297.4 182 73.6
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 7.8e-79 297.4 182 72.0
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.3e-78 296.6 185 70.8
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.3e-78 295.8 185 71.9
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 3.9e-78 295.0 187 71.7
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.1e-77 293.5 189 67.7
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.5e-77 293.1 186 69.4
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 1.5e-77 293.1 189 67.7
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 1.9e-77 292.7 185 70.8
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 2.5e-77 292.4 189 71.4
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 4.3e-77 291.6 170 79.4
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 5.6e-77 291.2 183 69.9
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 1.6e-76 289.7 186 68.3
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 2.1e-76 289.3 188 68.6
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.1e-76 289.3 187 71.1
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 4.8e-76 288.1 187 69.5
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 4.8e-76 288.1 185 69.7
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 8.1e-76 287.3 187 69.5
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.4e-75 286.6 187 71.1
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.4e-75 286.6 190 71.6
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.8e-75 286.2 185 68.6
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.8e-75 286.2 187 71.1
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.1e-75 285.4 187 71.1
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 3.1e-75 285.4 187 70.6
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 4.0e-75 285.0 185 69.2
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-74 283.5 183 68.3
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.2e-74 283.5 183 68.3
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.2e-74 283.5 187 70.1
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.5e-74 283.1 187 70.1
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.5e-74 283.1 187 67.9
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 3.4e-74 282.0 187 68.4
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 5.8e-74 281.2 183 68.3
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 7.6e-74 280.8 185 67.6
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 7.6e-74 280.8 182 69.2
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 7.6e-74 280.8 183 68.9
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 9.9e-74 280.4 188 69.1
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.3e-73 280.0 183 67.8
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 1.3e-73 280.0 191 68.6
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.7e-73 279.6 183 68.9
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 2.2e-73 279.3 184 69.0
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 2.2e-73 279.3 189 68.8
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 3.8e-73 278.5 184 69.0
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 4.9e-73 278.1 183 69.4
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 6.4e-73 277.7 185 66.5
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 6.4e-73 277.7 184 68.5
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 6.4e-73 277.7 183 67.8
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 6.4e-73 277.7 189 68.8
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.1e-72 276.9 183 69.4
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.1e-72 276.9 189 66.1
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.4e-72 276.6 184 68.5
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 2.4e-72 275.8 184 68.5
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 2.4e-72 275.8 183 68.9
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 2.4e-72 275.8 186 68.3
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.4e-72 275.8 186 68.3
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 2.4e-72 275.8 188 67.6
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 3.2e-72 275.4 185 67.0
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 4.2e-72 275.0 182 67.6
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 9.3e-72 273.9 189 66.1
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 9.3e-72 273.9 182 66.5
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 9.3e-72 273.9 183 68.3
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 2.7e-71 272.3 182 66.5
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 3.5e-71 271.9 190 65.3
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 3.5e-71 271.9 189 65.6
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 1.0e-70 270.4 190 65.8
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.0e-70 270.4 192 65.6
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.0e-70 270.4 192 65.6
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.8e-70 269.6 185 67.6
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.8e-70 269.6 189 66.1
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.9e-70 268.5 185 66.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 5.1e-70 268.1 181 64.1
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 5.1e-70 268.1 187 65.8
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 1.1e-69 266.9 187 66.8
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.5e-69 266.5 184 65.8
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.5e-69 266.5 189 66.1
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 2.5e-69 265.8 184 64.1
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.3e-69 265.4 189 65.1
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 5.6e-69 264.6 184 66.3
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 7.4e-69 264.2 184 64.7
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 3.6e-68 261.9 185 64.9
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 4.8e-68 261.5 185 65.9
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 4.8e-68 261.5 185 65.9
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 4.8e-68 261.5 185 65.9
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.4e-67 260.0 182 64.8
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 4.0e-67 258.5 161 72.7
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 4.0e-67 258.5 161 72.7
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 1.2e-66 256.9 183 65.6
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.5e-66 256.5 182 64.3
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.6e-66 255.8 183 66.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 5.8e-66 254.6 181 63.5
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 7.6e-66 254.2 189 61.4
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 2.2e-65 252.7 183 63.4
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 1.1e-64 250.4 190 56.8
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 4.2e-64 248.4 183 61.2
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.1e-63 246.1 160 68.8
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 1.8e-59 233.0 187 58.3
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 7.6e-58 227.6 186 56.5
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.4e-56 223.4 182 60.4
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 7.1e-56 221.1 160 66.9
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.7e-55 219.2 186 53.8
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 5.1e-54 214.9 133 69.2
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 8.7e-54 214.2 179 54.7
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.3e-52 210.3 156 61.5
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 2.0e-50 203.0 135 65.9
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 9.7e-45 184.1 187 46.0
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 3.0e-38 162.5 89 74.2
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.0e-33 147.5 82 70.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 9.5e-08 61.2 61 39.3
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.7e-07 58.9 152 32.2


User provided reference genes

Program Settings