Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021659.1 Olea europaea HOM05D000375 ORTHO05D000240 2.2e-263 911.8 461 100.0
Oeu049604.1 Olea europaea HOM05D000375 ORTHO05D000240 3.2e-129 466.1 490 58.6
Oeu055177.1 Olea europaea HOM05D000375 ORTHO05D000240 1.0e-63 248.4 453 42.4
Dinv35375 Davidia involucrata HOM05D000375 ORTHO05D000240 2.0e-59 234.2 496 39.5
SalBow6G6588 Salvia bowleyana HOM05D000375 ORTHO05D000240 4.8e-53 213.0 496 36.1
Nitab4.5_0006389g0010 Nicotiana tabacum HOM05D000375 ORTHO05D000240 3.2e-49 200.3 482 34.6
GSVIVG01038629001 Vitis vinifera HOM05D000375 ORTHO05D000240 1.2e-48 198.4 516 37.8
Nitab4.5_0000319g0230 Nicotiana tabacum HOM05D000375 ORTHO05D000240 1.3e-45 188.3 467 35.1
MSTRG.26986 Avicennia marina HOM05D000375 ORTHO05D000240 1.6e-43 181.4 504 35.7
Prupe.2G317500 Prunus persica HOM05D000375 ORTHO05D000240 1.7e-42 177.9 544 32.0
CAN.G303.7 Capsicum annuum HOM05D000375 ORTHO05D000240 1.1e-41 175.3 494 33.4
Oeu037968.1 Olea europaea HOM05D000375 ORTHO05D025956 8.0e-40 169.1 240 49.2
Sopen03g022150 Solanum pennellii HOM05D000375 ORTHO05D000240 3.4e-38 163.7 469 33.5
Haze_00280 Corylus avellana HOM05D000375 ORTHO05D000240 4.4e-38 163.3 522 33.7
Dinv29221 Davidia involucrata HOM05D000375 ORTHO05D000240 1.3e-37 161.8 407 36.1
Solyc03g082430.1 Solanum lycopersicum HOM05D000375 ORTHO05D000240 2.2e-37 161.0 467 34.0
Thecc.03G207100 Theobroma cacao HOM05D000375 ORTHO05D000240 1.1e-36 158.7 477 34.4
RcHm_v2.0_Chr1g0382681 Rosa chinensis HOM05D000375 ORTHO05D000240 1.8e-36 157.9 541 31.4
Rhsim03G0214300 Rhododendron simsii HOM05D000375 ORTHO05D000240 2.4e-36 157.5 491 33.8
Duzib084G0024 Durio zibethinus HOM05D000375 ORTHO05D000240 7.0e-36 156.0 492 33.3
PGSC0003DMG400003220 Solanum tuberosum HOM05D000375 ORTHO05D000240 2.7e-35 154.1 475 32.0
Cfa016174 Carpinus fangiana HOM05D000375 ORTHO05D000240 3.5e-35 153.7 445 34.6
Hma1.2p1_0094F.1_g047260 Hydrangea macrophylla HOM05D000375 ORTHO05D000240 5.9e-35 152.9 255 43.5
TAR636G1213 Trochodendron aralioides HOM05D000375 ORTHO05D000240 2.3e-34 151.0 458 33.0
Peaxi162Scf00300g00828 Petunia axillaris HOM05D000375 ORTHO05D000240 1.1e-33 148.7 448 32.1
Cc02_g00930 Coffea canephora HOM05D000375 ORTHO05D000240 2.1e-32 144.4 490 31.4
Potri.012G022600 Populus trichocarpa HOM05D000375 ORTHO05D000240 8.0e-32 142.5 504 32.1
FAN01G1108 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.4e-31 141.7 544 29.8
Nn3g18854 Nelumbo nucifera HOM05D000375 ORTHO05D000240 1.4e-31 141.7 535 31.2
CiPaw.06G042100 Carya illinoinensis HOM05D000375 ORTHO05D000240 1.2e-30 138.7 492 31.5
FvH4_7g32780 Fragaria vesca HOM05D000375 ORTHO05D000240 1.5e-30 138.3 544 29.4
COL.COLO4_14355 Corchorus olitorius HOM05D000375 ORTHO05D000240 1.7e-29 134.8 504 32.1
Sabra12G0011200 Salix brachista HOM05D000375 ORTHO05D000240 2.2e-29 134.4 510 32.4
Eucgr.A01418 Eucalyptus grandis HOM05D000375 ORTHO05D000240 4.9e-29 133.3 454 32.6
Gohir.A12G246800 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.2e-27 128.6 495 31.9
vmacro06429 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 1.6e-27 128.3 418 32.5
FAN03G1345 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.0e-27 127.9 555 27.7
FAN03G2868 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.0e-27 127.9 555 27.7
Gorai.008G265600 Gossypium raimondii HOM05D000375 ORTHO05D000240 2.0e-27 127.9 494 33.2
Sabra15G0004400 Salix brachista HOM05D000375 ORTHO05D000240 2.0e-27 127.9 483 32.9
Gohir.D12G247500 Gossypium hirsutum HOM05D000375 ORTHO05D000240 3.5e-27 127.1 495 32.5
FAN10G2746 Fragaria x ananassa HOM05D000375 ORTHO05D000240 7.8e-27 125.9 509 28.3
MD07G1297800 Malus domestica HOM05D000375 ORTHO05D000240 1.7e-26 124.8 485 30.9
CANSAT21G1117 Cannabis sativa HOM05D000375 ORTHO05D000240 2.3e-26 124.4 496 31.2
TAR629G2751 Trochodendron aralioides HOM05D000375 ORTHO05D000240 2.3e-26 124.4 270 39.6
Actinidia08689 Actinidia chinensis HOM05D000375 ORTHO05D000240 3.9e-26 123.6 362 35.1
DCAR_008970 Daucus carota HOM05D000375 ORTHO05D000240 3.9e-26 123.6 438 32.2
VMungo1309G0553 Vigna mungo HOM05D000375 ORTHO05D000240 8.6e-26 122.5 512 28.7
TWI23G0929 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 5.6e-25 119.8 469 31.1
Cpa.g.sc3.145 Carica papaya HOM05D000375 ORTHO05D000240 7.3e-25 119.4 470 29.8
Potri.015G006200 Populus trichocarpa HOM05D000375 ORTHO05D000240 7.3e-25 119.4 504 33.1
Ciclev10019529m.g Citrus clementina HOM05D000375 ORTHO05D000240 9.5e-25 119.0 429 32.9
Lj1g0010685 Lotus japonicus HOM05D000375 ORTHO05D000240 9.5e-25 119.0 452 29.6
Glyma.04G230600 Glycine max HOM05D000375 ORTHO05D000240 1.6e-24 118.2 512 29.9
Glyma.06G134600 Glycine max HOM05D000375 ORTHO05D000240 4.7e-24 116.7 490 28.8
Manes.01G041800 Manihot esculenta HOM05D000375 ORTHO05D000240 8.1e-24 115.9 448 29.5
QL09p007351 Quercus lobata HOM05D000375 ORTHO05D000240 1.1e-23 115.5 532 30.5
TWI14G0388 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 1.4e-23 115.2 431 30.2
CSS0026567 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 3.1e-23 114.0 387 32.3
Aqoxy7G00974 Aquilegia oxysepala HOM05D000375 ORTHO05D000240 4.0e-23 113.6 452 29.4
DCAR_020360 Daucus carota HOM05D000375 ORTHO05D000240 5.2e-23 113.2 435 31.5
CSS0006470 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 2.0e-22 111.3 387 31.8
TWI39G0606 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 2.6e-22 110.9 440 30.2
FAN03G1521 Fragaria x ananassa HOM05D000375 ORTHO05D000240 3.4e-22 110.5 262 35.1
Migut.F00160 Erythranthe guttata HOM05D000375 ORTHO05D000240 9.9e-22 109.0 400 31.5
Medtr3g092330 Medicago truncatula HOM05D000375 ORTHO05D000240 2.2e-21 107.8 496 29.6
Lalb_Chr11g0067311 Lupinus albus HOM05D000375 ORTHO05D000240 2.9e-21 107.5 482 29.0
Atru.chr12.2371 Acer truncatum HOM05D000375 ORTHO05D000240 6.4e-21 106.3 470 30.0
arahy.Tifrunner.gnm1.ann1.MSLW3U Arachis hypogaea HOM05D000375 ORTHO05D000240 2.1e-19 101.3 472 28.4
Phvul.009G047000 Phaseolus vulgaris HOM05D000375 ORTHO05D000240 6.0e-19 99.8 506 26.3
MBI12_g07777_MAGBIO Magnolia biondii HOM05D000375 ORTHO05D000240 1.3e-18 98.6 491 28.7
arahy.Tifrunner.gnm1.ann1.95DHJ9 Arachis hypogaea HOM05D000375 ORTHO05D000240 3.9e-18 97.1 476 29.6
Lalb_Chr08g0239781 Lupinus albus HOM05D000375 ORTHO05D000240 8.6e-18 95.9 499 26.1
CSS0002551 Camellia sinensis var. sinensis HOM05D000375 ORTHO05D000240 8.1e-16 89.4 418 28.5
Hund09704 Selenicereus undatus HOM05D000375 ORTHO05D000240 6.8e-15 86.3 446 29.8
SGA_v2.0_scaffold18G08458 Striga asiatica HOM05D000375 ORTHO05D000240 6.8e-15 86.3 407 29.0
Duzib205G1587 Durio zibethinus HOM05D000375 ORTHO05D000240 1.2e-14 85.5 234 33.8
Ah.07g204830 Amaranthus hybridus HOM05D000375 ORTHO05D000240 2.0e-14 84.7 463 27.6
Lalb_Chr23g0271871 Lupinus albus HOM05D000375 ORTHO05D000240 5.8e-14 83.2 447 25.7
ATR0579G065 Amborella trichopoda HOM05D000375 ORTHO05D000240 9.9e-14 82.4 482 26.8
Actinidia22212 Actinidia chinensis HOM05D000375 ORTHO05D000240 1.3e-13 82.0 501 27.5
PGR042G2639 Punica granatum HOM05D000375 ORTHO05D000240 1.3e-13 82.0 406 26.4
Lsat_1_v5_gn_2_135541 Lactuca sativa HOM05D000375 ORTHO05D000240 2.9e-13 80.9 425 29.2
COL.COLO4_10813 Corchorus olitorius HOM05D000375 ORTHO05D000240 6.4e-13 79.7 365 27.9
SGA_v2.0_scaffold44G16841 Striga asiatica HOM05D000375 ORTHO05D025956 8.4e-13 79.3 146 42.5
Rhsim02G0253100 Rhododendron simsii HOM05D000375 ORTHO05D000240 1.9e-12 78.2 442 27.1
vmacro11496 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 3.2e-12 77.4 435 29.9
unitig_748.g7282 Utricularia gibba HOM05D000375 ORTHO05D000240 4.1e-12 77.0 83 57.8
SalBow2G3136 Salvia bowleyana HOM05D000375 ORTHO05D000240 5.4e-12 76.6 383 29.0
unitig_748.g7280 Utricularia gibba HOM05D057192 ORTHO05D025956 9.2e-12 75.9 113 49.6
FAN10G3350 Fragaria x ananassa HOM05D000375 ORTHO05D000240 2.1e-11 74.7 116 42.2
Thecc.03G219200 Theobroma cacao HOM05D000375 ORTHO05D000240 2.1e-11 74.7 422 26.1
AUR62006018 Chenopodium quinoa HOM05D000375 ORTHO05D000240 2.7e-11 74.3 381 28.1
Prupe.5G131600 Prunus persica HOM05D000375 ORTHO05D000240 3.5e-11 73.9 388 25.5
Migut.F00995 Erythranthe guttata HOM05D000375 ORTHO05D000240 1.3e-10 72.0 432 29.4
Potri.001G082700 Populus trichocarpa HOM05D000375 ORTHO05D000240 1.3e-10 72.0 363 25.9
CARHR266820 Cardamine hirsuta HOM05D000375 ORTHO05D000240 3.0e-10 70.9 396 27.5
Ca_16761_v3 Cicer arietinum L. HOM05D000375 ORTHO05D000240 3.0e-10 70.9 269 29.7
Duzib084G1440 Durio zibethinus HOM05D000375 ORTHO05D000240 3.0e-10 70.9 440 25.2
Manes.05G190700 Manihot esculenta HOM05D000375 ORTHO05D000240 3.0e-10 70.9 64 57.8
Haze_09188 Corylus avellana HOM05D000375 ORTHO05D000240 3.9e-10 70.5 451 25.7
TPR.G28971 Trifolium pratense HOM05D000375 ORTHO05D000240 6.6e-10 69.7 434 28.3
Nn1g00420 Nelumbo nucifera HOM05D042245 ORTHO05D000240 1.5e-09 68.6 215 36.3
THA.LOC104799945 Tarenaya hassleriana HOM05D000375 ORTHO05D000240 1.5e-09 68.6 389 27.8
Cfa011910 Carpinus fangiana HOM05D000375 ORTHO05D000240 2.5e-09 67.8 455 25.9
Psat5g073400 Pisum sativum HOM05D000375 ORTHO05D000240 2.5e-09 67.8 422 26.1
FvH4_5g10750 Fragaria vesca HOM05D000375 ORTHO05D000240 3.3e-09 67.4 393 26.2
Sabra01G0059400 Salix brachista HOM05D000375 ORTHO05D000240 4.3e-09 67.0 338 28.7
AT5G53660 Arabidopsis thaliana HOM05D000375 ORTHO05D000240 7.3e-09 66.2 411 28.5
MD06G1121000 Malus domestica HOM05D000375 ORTHO05D000240 9.6e-09 65.9 371 27.0
Duzib205G0789 Durio zibethinus HOM05D000375 ORTHO05D000240 1.2e-08 65.5 432 25.7
FAN04G2198 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.2e-08 65.5 367 24.8
FAN13G2770 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.2e-08 65.5 373 25.5
FAN18G1530 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.2e-08 65.5 393 26.2
Lj2A155G28 Lonicera japonica HOM05D000375 ORTHO05D000240 1.2e-08 65.5 417 26.6
FAN08G2601 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.6e-08 65.1 386 25.1
BcaB05g22069 Brassica carinata HOM05D000375 ORTHO05D000240 2.8e-08 64.3 62 54.8
GSVIVG01019667001 Vitis vinifera HOM05D000375 ORTHO05D000240 2.8e-08 64.3 186 30.6
AL8G28610 Arabidopsis lyrata HOM05D000375 ORTHO05D000240 3.6e-08 63.9 398 27.9
TAR629G0608 Trochodendron aralioides HOM05D000375 ORTHO05D000240 4.7e-08 63.5 44 72.7
Atru.chr9.1853 Acer truncatum HOM05D000375 ORTHO05D000240 8.1e-08 62.8 412 24.0
Actinidia04172 Actinidia chinensis HOM05D000375 ORTHO05D000240 1.1e-07 62.4 327 27.8
Thhalv10013862m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 1.1e-07 62.4 61 57.4
Gorai.008G259500 Gossypium raimondii HOM05D000375 ORTHO05D000240 1.8e-07 61.6 385 23.4
RcHm_v2.0_Chr7g0187381 Rosa chinensis HOM05D000375 ORTHO05D000240 1.8e-07 61.6 375 24.3
A02p10920 Brassica napus HOM05D000375 ORTHO05D000240 2.4e-07 61.2 61 55.7
BraA02t06157Z Brassica rapa HOM05D000375 ORTHO05D000240 2.4e-07 61.2 61 55.7
Ciclev10019828m.g Citrus clementina HOM05D000375 ORTHO05D000240 4.0e-07 60.5 374 25.4
Carub.0008s1400 Capsella rubella HOM05D000375 ORTHO05D000240 6.9e-07 59.7 385 27.3
Aa31LG3G9790 Aethionema arabicum HOM05D000375 ORTHO05D000240 9.0e-07 59.3 60 53.3
BcaB08g35732 Brassica carinata HOM05D000375 ORTHO05D000240 9.0e-07 59.3 59 55.9
C02p18120 Brassica napus HOM05D000375 ORTHO05D000240 1.2e-06 58.9 79 48.1
BolC2t07943H Brassica oleracea HOM05D000375 ORTHO05D000240 1.2e-06 58.9 79 48.1
Gohir.A12G240900 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.2e-06 58.9 364 25.5
Oeu013370.1 Olea europaea HOM05D000375 ORTHO05D000240 1.5e-06 58.5 456 23.9
unitig_0.g2446 Utricularia gibba HOM05D000375 ORTHO05D000240 1.5e-06 58.5 379 25.1
Sp6g15780 Schrenkiella parvula HOM05D000375 ORTHO05D000240 2.0e-06 58.2 55 60.0
unitig_747.g21926 Utricularia gibba HOM05D000375 ORTHO05D000240 2.0e-06 58.2 62 50.0
EL10Ac3g05196 Beta vulgaris HOM05D000375 ORTHO05D000240 3.4e-06 57.4 515 25.4
Gohir.D12G242200 Gossypium hirsutum HOM05D000375 ORTHO05D000240 3.4e-06 57.4 366 23.8
HPP92_025936 Vanilla planifolia HOM05D000375 ORTHO05D000240 5.8e-06 56.6 61 49.2
CANSAT21G0845 Cannabis sativa HOM05D000375 ORTHO05D000240 7.6e-06 56.2 109 39.4
Ah.09g231400 Amaranthus hybridus HOM05D000375 ORTHO05D000240 9.9e-06 55.8 73 46.6
Sabra03G0107600 Salix brachista HOM05D000375 ORTHO05D000240 9.9e-06 55.8 42 64.3


User provided reference genes

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