Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021642.1 Olea europaea HOM05D002635 ORTHO05D002756 1.7e-106 389.4 203 100.0
Oeu021643.1 Olea europaea HOM05D002635 ORTHO05D002756 1.7e-106 389.4 203 100.0
Oeu021644.1 Olea europaea HOM05D002635 ORTHO05D002756 1.7e-106 389.4 203 100.0
Oeu021645.1 Olea europaea HOM05D002635 ORTHO05D002756 1.7e-106 389.4 203 100.0
Dinv19431 Davidia involucrata HOM05D002635 ORTHO05D002756 4.0e-60 235.3 307 47.2
GSVIVG01023219001 Vitis vinifera HOM05D002635 ORTHO05D002756 3.2e-57 225.7 205 61.0
Dinv29614 Davidia involucrata HOM05D002635 ORTHO05D002756 4.9e-50 201.8 243 51.0
MSTRG.16479 Avicennia marina HOM05D002635 ORTHO05D002756 1.3e-45 187.2 389 35.0
Oeu058643.1 Olea europaea HOM05D002635 ORTHO05D002756 1.4e-44 183.7 141 69.5
Cc02_g23390 Coffea canephora HOM05D002635 ORTHO05D002756 1.2e-43 180.6 394 34.0
MSTRG.27874 Avicennia marina HOM05D002635 ORTHO05D002756 7.6e-43 177.9 170 54.1
CSS0009773 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 1.3e-42 177.2 396 35.9
Hma1.2p1_1368F.1_g278530 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 8.4e-42 174.5 391 34.0
Nitab4.5_0001057g0160 Nicotiana tabacum HOM05D002635 ORTHO05D002756 1.9e-41 173.3 390 33.1
Actinidia00167 Actinidia chinensis HOM05D002635 ORTHO05D002756 2.7e-40 169.5 168 56.5
Nitab4.5_0002546g0060 Nicotiana tabacum HOM05D002635 ORTHO05D002756 2.7e-40 169.5 390 32.6
QL02p101856 Quercus lobata HOM05D002635 ORTHO05D002756 2.7e-40 169.5 191 51.3
Rhsim05G0116700 Rhododendron simsii HOM05D002635 ORTHO05D002756 6.0e-40 168.3 168 55.4
Haze_10023 Corylus avellana HOM05D002635 ORTHO05D002756 7.9e-40 167.9 388 34.3
Cfa004466 Carpinus fangiana HOM05D002635 ORTHO05D002756 1.8e-39 166.8 388 34.0
Lj9P296T23 Lonicera japonica HOM05D002635 ORTHO05D002756 1.8e-39 166.8 177 50.8
Manes.10G115400 Manihot esculenta HOM05D002635 ORTHO05D002756 2.3e-39 166.4 172 55.2
Thecc.02G014300 Theobroma cacao HOM05D002635 ORTHO05D002756 2.3e-39 166.4 391 33.5
Glyma.12G165000 Glycine max HOM05D002635 ORTHO05D002756 3.9e-39 165.6 188 50.0
PGSC0003DMG400024875 Solanum tuberosum HOM05D002635 ORTHO05D002756 6.7e-39 164.9 390 32.3
Medtr2g005260 Medicago truncatula HOM05D002635 ORTHO05D002756 8.7e-39 164.5 170 50.6
Glyma.16G001300 Glycine max HOM05D002635 ORTHO05D002756 1.5e-38 163.7 157 56.1
Sed0008691 Sechium edule HOM05D002635 ORTHO05D002756 1.5e-38 163.7 172 54.1
Sopen01g045630 Solanum pennellii HOM05D002635 ORTHO05D002756 1.5e-38 163.7 390 32.1
TPR.G2087 Trifolium pratense HOM05D002635 ORTHO05D002756 1.5e-38 163.7 194 47.9
MSTRG.5197 Avicennia marina HOM05D002635 ORTHO05D002756 2.5e-38 162.9 161 52.8
Ca_00022_v3 Cicer arietinum L. HOM05D002635 ORTHO05D002756 2.5e-38 162.9 166 51.8
MELO3C016485.2 Cucumis melo HOM05D002635 ORTHO05D002756 3.3e-38 162.5 168 53.6
Lj6g0026247 Lotus japonicus HOM05D002635 ORTHO05D002756 5.6e-38 161.8 166 51.8
VMungo1215G1734 Vigna mungo HOM05D002635 ORTHO05D002756 9.6e-38 161.0 164 52.4
Ciclev10001394m.g Citrus clementina HOM05D002635 ORTHO05D002756 1.6e-37 160.2 169 51.5
Oeu010215.1 Olea europaea HOM05D002635 ORTHO05D002756 1.6e-37 160.2 168 53.0
VMungo0540G0642 Vigna mungo HOM05D002635 ORTHO05D002756 2.1e-37 159.8 166 52.4
CsaV3_3G006550 Cucumis sativus L. HOM05D002635 ORTHO05D002756 2.8e-37 159.5 168 53.0
MD08G1245000 Malus domestica HOM05D002635 ORTHO05D002756 2.8e-37 159.5 171 52.0
Duzib052G0871 Durio zibethinus HOM05D002635 ORTHO05D002756 3.7e-37 159.1 163 53.4
FvH4_5g28140 Fragaria vesca HOM05D002635 ORTHO05D002756 3.7e-37 159.1 172 51.7
FAN08G2963 Fragaria x ananassa HOM05D002635 ORTHO05D002756 3.7e-37 159.1 172 51.7
FAN18G1247 Fragaria x ananassa HOM05D002635 ORTHO05D002756 3.7e-37 159.1 172 51.7
CSS0014121 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 4.8e-37 158.7 394 34.0
CiPaw.05G002800 Carya illinoinensis HOM05D002635 ORTHO05D002756 4.8e-37 158.7 163 54.6
DCAR_006659 Daucus carota HOM05D002635 ORTHO05D002756 4.8e-37 158.7 168 53.0
Phvul.006G220600 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 6.2e-37 158.3 166 52.4
Psat1g223800 Pisum sativum HOM05D002635 ORTHO05D002756 8.1e-37 157.9 157 52.9
arahy.Tifrunner.gnm1.ann1.3P7FNU Arachis hypogaea HOM05D002635 ORTHO05D002756 1.8e-36 156.8 186 49.5
FAN04G1944 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.8e-36 156.8 172 51.2
Gorai.002G163000 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.8e-36 156.8 191 48.7
Manes.07G026600 Manihot esculenta HOM05D002635 ORTHO05D002756 1.8e-36 156.8 183 51.4
Gohir.D01G131300 Gossypium hirsutum HOM05D002635 ORTHO05D002756 2.4e-36 156.4 191 48.7
RcHm_v2.0_Chr7g0220291 Rosa chinensis HOM05D002635 ORTHO05D002756 2.4e-36 156.4 174 51.7
arahy.Tifrunner.gnm1.ann1.I3LLGY Arachis hypogaea HOM05D002635 ORTHO05D002756 5.3e-36 155.2 186 48.9
TAR381G0357 Trochodendron aralioides HOM05D002635 ORTHO05D002756 5.3e-36 155.2 173 52.6
TAR624G0320 Trochodendron aralioides HOM05D002635 ORTHO05D002756 5.3e-36 155.2 168 53.6
PGR142G4069 Punica granatum HOM05D002635 ORTHO05D002756 1.2e-35 154.1 163 50.3
CiPaw.06G175900 Carya illinoinensis HOM05D002635 ORTHO05D002756 1.5e-35 153.7 163 54.6
Phvul.003G075300 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 2.0e-35 153.3 195 47.7
Solyc01g103200.4 Solanum lycopersicum HOM05D002635 ORTHO05D002756 2.0e-35 153.3 183 47.0
Sopen01g045610 Solanum pennellii HOM05D002635 ORTHO05D002756 2.0e-35 153.3 183 47.0
Sabra01G0172400 Salix brachista HOM05D002635 ORTHO05D002756 2.6e-35 152.9 163 54.6
Prupe.1G582400 Prunus persica HOM05D002635 ORTHO05D002756 3.4e-35 152.5 171 52.0
TWI23G0700 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 3.4e-35 152.5 170 52.4
COL.COLO4_17694 Corchorus olitorius HOM05D002635 ORTHO05D002756 5.8e-35 151.8 168 53.0
PGR142G3898 Punica granatum HOM05D002635 ORTHO05D002756 7.6e-35 151.4 202 44.6
Migut.N00855 Erythranthe guttata HOM05D002635 ORTHO05D002756 1.0e-34 151.0 162 51.2
Peaxi162Scf00011g01619 Petunia axillaris HOM05D002635 ORTHO05D002756 1.0e-34 151.0 393 31.0
Potri.003G003500 Populus trichocarpa HOM05D002635 ORTHO05D002756 1.0e-34 151.0 169 50.9
Potri.004G227000 Populus trichocarpa HOM05D002635 ORTHO05D002756 1.0e-34 151.0 163 53.4
Sabra03G0001800 Salix brachista HOM05D002635 ORTHO05D002756 1.0e-34 151.0 169 50.3
Atru.chr6.455 Acer truncatum HOM05D002635 ORTHO05D002756 1.3e-34 150.6 169 49.7
Duzib132G0923 Durio zibethinus HOM05D002635 ORTHO05D002756 1.3e-34 150.6 184 48.4
TWI59G0859 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 1.7e-34 150.2 171 50.3
Gohir.A03G216000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 2.9e-34 149.4 178 47.2
unitig_26.g9163 Utricularia gibba HOM05D002635 ORTHO05D002756 3.8e-34 149.1 167 49.1
CAN.G855.35 Capsicum annuum HOM05D002635 ORTHO05D002756 4.9e-34 148.7 393 30.8
HanXRQChr10g0299381 Helianthus annuus HOM05D002635 ORTHO05D002756 4.9e-34 148.7 163 52.8
Gorai.005G266100 Gossypium raimondii HOM05D002635 ORTHO05D002756 6.5e-34 148.3 178 47.2
Eucgr.G00246 Eucalyptus grandis HOM05D002635 ORTHO05D002756 8.4e-34 147.9 198 46.0
Nn5g27275 Nelumbo nucifera HOM05D002635 ORTHO05D002756 8.4e-34 147.9 162 50.6
Rhsim11G0121400 Rhododendron simsii HOM05D002635 ORTHO05D002756 8.4e-34 147.9 163 52.8
DCAR_021340 Daucus carota HOM05D002635 ORTHO05D002756 1.4e-33 147.1 168 51.2
Gohir.D02G237600 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.4e-33 147.1 178 47.2
THA.LOC104816831 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 1.9e-33 146.7 163 49.1
Migut.B00736 Erythranthe guttata HOM05D002635 ORTHO05D002756 3.2e-33 146.0 152 50.0
HanXRQChr03g0068081 Helianthus annuus HOM05D002635 ORTHO05D002756 4.2e-33 145.6 175 49.1
PSO170G5519 Papaver somniferum HOM05D002635 ORTHO05D002756 4.2e-33 145.6 169 49.7
DCAR_031795 Daucus carota HOM05D002635 ORTHO05D002756 5.5e-33 145.2 392 31.1
THA.LOC104823706 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 5.5e-33 145.2 171 47.4
PSO017G5438 Papaver somniferum HOM05D002635 ORTHO05D002756 1.2e-32 144.1 169 49.7
Lsat_1_v5_gn_9_121240 Lactuca sativa HOM05D002635 ORTHO05D002756 2.1e-32 143.3 180 46.1
unitig_749.g14215 Utricularia gibba HOM05D002635 ORTHO05D002756 1.3e-31 140.6 167 47.3
SHI04877 Sapria himalayana HOM05D002635 ORTHO05D002756 1.8e-31 140.2 160 48.1
CARHR054490 Cardamine hirsuta HOM05D002635 ORTHO05D002756 8.7e-31 137.9 159 49.1
Aa31LG1G5410 Aethionema arabicum HOM05D002635 ORTHO05D002756 1.5e-30 137.1 175 44.0
AL1G67330 Arabidopsis lyrata HOM05D002635 ORTHO05D002756 4.3e-30 135.6 160 47.5
Carub.0002s0693 Capsella rubella HOM05D002635 ORTHO05D002756 4.3e-30 135.6 160 47.5
THA.LOC104820362 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 4.3e-30 135.6 169 45.6
AT1G57680 Arabidopsis thaliana HOM05D002635 ORTHO05D002756 5.7e-30 135.2 160 47.5
Gorai.012G170100 Gossypium raimondii HOM05D002635 ORTHO05D002756 5.7e-30 135.2 194 44.3
Thhalv10023548m.g Eutrema salsugineum HOM05D002635 ORTHO05D002756 1.3e-29 134.0 160 46.2
Sp2g05650 Schrenkiella parvula HOM05D002635 ORTHO05D002756 1.3e-29 134.0 160 46.9
Gohir.D04G177200 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.6e-29 133.7 194 44.3
MBI03_g28424_MAGBIO Magnolia biondii HOM05D002635 ORTHO05D002756 2.1e-29 133.3 172 45.3
Aa31LG2G11240 Aethionema arabicum HOM05D002635 ORTHO05D002756 3.7e-29 132.5 160 47.5
Lsat_1_v5_gn_5_104780 Lactuca sativa HOM05D002635 ORTHO05D002756 6.3e-29 131.7 163 49.7
Gohir.A04G134000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 8.2e-29 131.3 163 49.1
HanXRQChr16g0513621 Helianthus annuus HOM05D002635 ORTHO05D002756 1.1e-28 131.0 163 47.9
Glyma.07G273400 Glycine max HOM05D002635 ORTHO05D002756 1.4e-28 130.6 166 45.2
TPR.G34019 Trifolium pratense HOM05D002635 ORTHO05D002756 1.4e-28 130.6 160 47.5
BcaC02g10709 Brassica carinata HOM05D002635 ORTHO05D002756 1.8e-28 130.2 160 45.6
C04p26980 Brassica napus HOM05D002635 ORTHO05D002756 1.8e-28 130.2 160 45.6
BolC4t24099H Brassica oleracea HOM05D002635 ORTHO05D002756 1.8e-28 130.2 160 45.6
BcaB07g31158 Brassica carinata HOM05D002635 ORTHO05D002756 2.4e-28 129.8 164 43.9
BcaB04g20182 Brassica carinata HOM05D002635 ORTHO05D002756 5.3e-28 128.6 160 45.6
BcaC04g22106 Brassica carinata HOM05D002635 ORTHO05D002756 5.3e-28 128.6 161 45.3
C09p23290 Brassica napus HOM05D002635 ORTHO05D002756 5.3e-28 128.6 161 45.3
BolC9t55247H Brassica oleracea HOM05D002635 ORTHO05D002756 5.3e-28 128.6 161 45.3
Sc09g0002020 Simmondsia chinensis HOM05D002635 ORTHO05D002756 1.2e-27 127.5 163 44.8
Hma1.2p1_0157F.1_g068985 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 1.5e-27 127.1 307 32.2
Hund07200 Selenicereus undatus HOM05D002635 ORTHO05D002756 1.5e-27 127.1 156 46.2
BraA09t37489Z Brassica rapa HOM05D002635 ORTHO05D002756 2.0e-27 126.7 161 44.7
BcaC06g31780 Brassica carinata HOM05D002635 ORTHO05D002756 2.6e-27 126.3 160 45.0
Medtr4g081900 Medicago truncatula HOM05D002635 ORTHO05D002756 3.4e-27 125.9 185 40.0
A09p18660 Brassica napus HOM05D002635 ORTHO05D002756 4.5e-27 125.6 161 44.1
Aqoxy5G00844 Aquilegia oxysepala HOM05D002635 ORTHO05D002756 5.9e-27 125.2 163 42.9
AUR62000568 Chenopodium quinoa HOM05D002635 ORTHO05D002756 7.6e-27 124.8 162 45.7
Sc16g0009750 Simmondsia chinensis HOM05D002635 ORTHO05D002756 2.2e-26 123.2 181 41.4
ATR1089G101 Amborella trichopoda HOM05D002635 ORTHO05D002756 3.8e-26 122.5 166 45.2
A01p28120 Brassica napus HOM05D002635 ORTHO05D002756 3.8e-26 122.5 158 46.2
BraA01t02939Z Brassica rapa HOM05D002635 ORTHO05D002756 3.8e-26 122.5 158 46.2
Ah.06g188440 Amaranthus hybridus HOM05D002635 ORTHO05D002756 3.5e-24 115.9 162 43.8
BcaC09g49521 Brassica carinata HOM05D002635 ORTHO05D002756 6.1e-24 115.2 160 41.9
C01p35650 Brassica napus HOM05D002635 ORTHO05D002756 6.1e-24 115.2 160 41.9
BolC1t03524H Brassica oleracea HOM05D002635 ORTHO05D002756 6.1e-24 115.2 160 41.9
Medtr4g081890 Medicago truncatula HOM05D002635 ORTHO05D002756 1.0e-23 114.4 158 41.8
SGA_v2.0_scaffold131G34378 Striga asiatica HOM05D002635 ORTHO05D000003 1.8e-23 113.6 136 49.3
unitig_699.g19846 Utricularia gibba HOM05D002635 ORTHO05D002756 2.5e-22 109.8 160 40.6
HPP92_004537 Vanilla planifolia HOM05D002635 ORTHO05D002756 1.1e-20 104.4 205 35.6
Os01g0885200 Oryza sativa ssp. japonica HOM05D002635 ORTHO05D002756 5.3e-20 102.1 159 39.0
HPP92_004661 Vanilla planifolia HOM05D002635 ORTHO05D002756 5.3e-20 102.1 212 34.9
Zm00001eb366030 Zea mays HOM05D002635 ORTHO05D002756 1.1e-17 94.4 159 37.7
Mapoly0003s0203 Marchantia polymorpha HOM05D002635 ORTHO05D002756 1.6e-16 90.5 161 32.3
Lalb_Chr18g0061101 Lupinus albus HOM05D002635 ORTHO05D002756 3.6e-16 89.4 67 64.2
HPP92_004505 Vanilla planifolia HOM05D002635 ORTHO05D002756 1.0e-15 87.8 118 43.2
Zm00001eb145510 Zea mays HOM05D002635 ORTHO05D002756 1.8e-15 87.0 132 42.4
Pp3c2_5540 Physcomitrium patens HOM05D002635 ORTHO05D002756 5.1e-15 85.5 161 34.8
SMO266G0089 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 8.8e-15 84.7 182 29.1
Pp3c1_36080 Physcomitrium patens HOM05D002635 ORTHO05D002756 2.2e-13 80.1 161 32.3
ECA234G2699 Erigeron canadensis HOM05D002635 ORTHO05D002756 2.8e-13 79.7 142 43.0
Actinidia26186 Actinidia chinensis HOM05D002635 ORTHO05D002756 1.5e-11 73.9 314 29.3
ATR0737G083 Amborella trichopoda HOM05D002635 ORTHO05D002756 1.5e-11 73.9 160 29.4
SEGI_27222 Sequoiadendron giganteum HOM05D002635 ORTHO05D002756 2.6e-11 73.2 161 30.4
Cpa.g.sc113.20 Carica papaya HOM05D002635 ORTHO05D002756 1.4e-09 67.4 68 54.4
Peaxi162Scf00011g01728 Petunia axillaris HOM05D002635 ORTHO05D002756 1.9e-09 67.0 96 42.7
Os04g0443700 Oryza sativa ssp. japonica HOM05D002635 ORTHO05D002756 3.2e-09 66.2 190 31.1
SMO364G0496 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 5.1e-07 58.9 166 31.3
MD15G1440100 Malus domestica HOM05D002635 ORTHO05D002756 4.4e-06 55.8 56 51.8
Lj5P271T19 Lonicera japonica HOM05D002635 ORTHO05D002756 5.7e-06 55.5 41 68.3


User provided reference genes

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