Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021619.1 Olea europaea HOM05D001137 ORTHO05D005066 8.2e-61 236.9 121 100.0
MSTRG.3938 Avicennia marina HOM05D001137 ORTHO05D005066 6.3e-45 184.1 118 80.5
Dinv38313 Davidia involucrata HOM05D001137 ORTHO05D005066 8.3e-45 183.7 116 77.6
Migut.G00190 Erythranthe guttata HOM05D001137 ORTHO05D005066 5.4e-44 181.0 118 75.4
SGA_v2.0_scaffold86G26927 Striga asiatica HOM05D001137 ORTHO05D005066 5.4e-44 181.0 120 77.5
SalBow2G1809 Salvia bowleyana HOM05D001137 ORTHO05D005066 2.9e-42 175.3 120 75.0
Cc03_g02170 Coffea canephora HOM05D001137 ORTHO05D005066 3.8e-42 174.9 118 77.1
Actinidia01942 Actinidia chinensis HOM05D001137 ORTHO05D005066 6.1e-40 167.5 118 72.0
Oeu021045.1 Olea europaea HOM05D001137 ORTHO05D005066 6.8e-39 164.1 104 80.8
Lalb_Chr18g0055631 Lupinus albus HOM05D001137 ORTHO05D005066 8.8e-39 163.7 123 67.5
GSVIVG01017784001 Vitis vinifera HOM05D001137 ORTHO05D005066 1.2e-38 163.3 119 71.4
Hma1.2p1_0698F.1_g205450 Hydrangea macrophylla HOM05D001137 ORTHO05D005066 2.0e-38 162.5 121 70.2
CSS0008512 Camellia sinensis var. sinensis HOM05D001137 ORTHO05D005066 3.4e-38 161.8 118 67.8
CSS0028405 Camellia sinensis var. sinensis HOM05D001137 ORTHO05D005066 3.4e-38 161.8 118 67.8
RcHm_v2.0_Chr4g0421431 Rosa chinensis HOM05D001137 ORTHO05D005066 3.4e-38 161.8 118 70.3
CiPaw.01G151600 Carya illinoinensis HOM05D001137 ORTHO05D005066 9.8e-38 160.2 118 69.5
Prupe.1G140300 Prunus persica HOM05D001137 ORTHO05D005066 3.7e-37 158.3 118 72.0
Ca_00560_v3 Cicer arietinum L. HOM05D001137 ORTHO05D005066 6.3e-37 157.5 118 65.3
MD16G1173400 Malus domestica HOM05D001137 ORTHO05D005066 1.4e-36 156.4 118 68.6
Phvul.003G102100 Phaseolus vulgaris HOM05D001137 ORTHO05D005066 1.8e-36 156.0 118 67.8
VMungo1215G0971 Vigna mungo HOM05D001137 ORTHO05D005066 2.4e-36 155.6 118 66.9
MBI18_g01977_MAGBIO Magnolia biondii HOM05D001137 ORTHO05D005066 7.0e-36 154.1 120 64.2
Sc13g0003550 Simmondsia chinensis HOM05D001137 ORTHO05D005066 7.0e-36 154.1 118 66.9
Aqoxy2G03075 Aquilegia oxysepala HOM05D001137 ORTHO05D005066 9.2e-36 153.7 118 67.8
arahy.Tifrunner.gnm1.ann1.GKEN9S Arachis hypogaea HOM05D001137 ORTHO05D005066 9.2e-36 153.7 118 66.1
Lj4g0021111 Lotus japonicus HOM05D001137 ORTHO05D005066 9.2e-36 153.7 122 65.6
Manes.15G015400 Manihot esculenta HOM05D001137 ORTHO05D005066 9.2e-36 153.7 118 64.4
Nn3g21353 Nelumbo nucifera HOM05D001137 ORTHO05D005066 9.2e-36 153.7 118 70.3
Nn4g25962 Nelumbo nucifera HOM05D001137 ORTHO05D005066 2.7e-35 152.1 118 66.1
Cpa.g.sc1214.1 Carica papaya HOM05D001137 ORTHO05D005066 3.5e-35 151.8 118 65.3
CAN.G580.11 Capsicum annuum HOM05D001137 ORTHO05D005066 4.5e-35 151.4 118 65.3
Ciclev10004439m.g Citrus clementina HOM05D001137 ORTHO05D005066 4.5e-35 151.4 118 65.3
Atru.chr4.2781 Acer truncatum HOM05D001137 ORTHO05D005066 5.9e-35 151.0 120 65.8
FvH4_4g17510 Fragaria vesca HOM05D001137 ORTHO05D005066 5.9e-35 151.0 118 66.9
FAN12G2086 Fragaria x ananassa HOM05D001137 ORTHO05D005066 5.9e-35 151.0 118 66.9
Glyma.15G096200 Glycine max HOM05D001137 ORTHO05D005066 5.9e-35 151.0 118 63.6
QL06p007709 Quercus lobata HOM05D001137 ORTHO05D005066 1.3e-34 149.8 120 63.3
CDE11G0818 Ceratophyllum demersum HOM05D001137 ORTHO05D005066 3.8e-34 148.3 118 63.6
FAN17G0634 Fragaria x ananassa HOM05D001137 ORTHO05D005066 3.8e-34 148.3 118 66.1
Medtr2g019860 Medicago truncatula HOM05D001137 ORTHO05D005066 6.6e-34 147.5 118 59.3
Solyc01g067480.4 Solanum lycopersicum HOM05D001137 ORTHO05D005066 6.6e-34 147.5 118 62.7
PGSC0003DMG402022673 Solanum tuberosum HOM05D001137 ORTHO05D005066 6.6e-34 147.5 118 62.7
Psat1g187920 Pisum sativum HOM05D001137 ORTHO05D005066 1.5e-33 146.4 122 59.8
Phvul.006G162800 Phaseolus vulgaris HOM05D001137 ORTHO05D005066 1.9e-33 146.0 118 64.4
Sopen01g029390 Solanum pennellii HOM05D001137 ORTHO05D005066 1.9e-33 146.0 118 61.9
PSO210G1694 Papaver somniferum HOM05D001137 ORTHO05D005066 4.3e-33 144.8 121 62.8
AUR62027452 Chenopodium quinoa HOM05D001137 ORTHO05D005066 5.6e-33 144.4 120 62.5
HanXRQChr01g0008171 Helianthus annuus HOM05D001137 ORTHO05D005066 5.6e-33 144.4 118 64.4
Manes.03G192200 Manihot esculenta HOM05D001137 ORTHO05D005066 7.3e-33 144.1 118 63.6
TWI73G0988 Tripterygium wilfordii HOM05D001137 ORTHO05D005066 9.5e-33 143.7 116 59.5
Rhsim04G0218100 Rhododendron simsii HOM05D001137 ORTHO05D005066 1.2e-32 143.3 106 66.0
Glyma.13G216400 Glycine max HOM05D001137 ORTHO05D005066 1.6e-32 142.9 118 62.7
Peaxi162Scf00386g00616 Petunia axillaris HOM05D001137 ORTHO05D005066 2.1e-32 142.5 100 67.0
Lj6g0014210 Lotus japonicus HOM05D001137 ORTHO05D005066 2.8e-32 142.1 118 62.7
PGR004G0465 Punica granatum HOM05D001137 ORTHO05D005066 4.7e-32 141.4 118 62.7
DCAR_030541 Daucus carota HOM05D001137 ORTHO05D005066 6.1e-32 141.0 109 67.0
Potri.010G022000 Populus trichocarpa HOM05D001137 ORTHO05D005066 6.1e-32 141.0 122 61.5
FAN07G1649 Fragaria x ananassa HOM05D001137 ORTHO05D005066 1.0e-31 140.2 125 61.6
VMungo0375G0001 Vigna mungo HOM05D001137 ORTHO05D005066 1.0e-31 140.2 118 63.6
TPR.G1509 Trifolium pratense HOM05D001137 ORTHO05D005066 1.4e-31 139.8 118 57.6
COL.COLO4_13912 Corchorus olitorius HOM05D001137 ORTHO05D005066 1.8e-31 139.4 119 61.3
PSO170G4147 Papaver somniferum HOM05D001137 ORTHO05D005066 1.8e-31 139.4 121 60.3
Thecc.04G279600 Theobroma cacao HOM05D001137 ORTHO05D005066 1.8e-31 139.4 118 63.6
Ah.08g211130 Amaranthus hybridus HOM05D001137 ORTHO05D005066 3.0e-31 138.7 120 62.5
Duzib151G0891 Durio zibethinus HOM05D001137 ORTHO05D005066 4.0e-31 138.3 118 64.4
Sabra08G0155800 Salix brachista HOM05D001137 ORTHO05D005066 5.2e-31 137.9 122 59.8
vmacro22477 Vaccinium macrocarpon HOM05D001137 ORTHO05D005066 8.9e-31 137.1 104 65.4
TAR355G0001 Trochodendron aralioides HOM05D000116 ORTHO05D000133 1.5e-30 136.3 108 66.7
TAR362G1170 Trochodendron aralioides HOM05D001137 ORTHO05D005066 1.5e-30 136.3 108 66.7
Nitab4.5_0000829g0190 Nicotiana tabacum HOM05D001137 ORTHO05D005066 2.0e-30 136.0 97 66.0
ClCG00G003670 Citrullus lanatus HOM05D001137 ORTHO05D005066 3.4e-30 135.2 120 63.3
ClCG05G005910 Citrullus lanatus HOM05D001137 ORTHO05D005066 3.4e-30 135.2 120 63.3
Nn1g08126 Nelumbo nucifera HOM05D001137 ORTHO05D005066 4.4e-30 134.8 105 63.8
TWI09G0222 Tripterygium wilfordii HOM05D001137 ORTHO05D005066 4.4e-30 134.8 119 58.8
arahy.Tifrunner.gnm1.ann1.S97PWN Arachis hypogaea HOM05D001137 ORTHO05D005066 7.5e-30 134.0 121 62.8
MELO3C006622.2 Cucumis melo HOM05D001137 ORTHO05D005066 9.8e-30 133.7 120 63.3
Sed0020296 Sechium edule HOM05D001137 ORTHO05D005066 1.3e-29 133.3 118 63.6
Glyma.17G024000 Glycine max HOM05D001137 ORTHO05D005066 1.7e-29 132.9 118 59.3
ECA248G1543 Erigeron canadensis HOM05D001137 ORTHO05D005066 2.2e-29 132.5 118 61.9
CsaV3_3G014290 Cucumis sativus L. HOM05D001137 ORTHO05D005066 2.9e-29 132.1 120 62.5
Potri.008G214900 Populus trichocarpa HOM05D001137 ORTHO05D005066 2.9e-29 132.1 123 58.5
Sed0010501 Sechium edule HOM05D001137 ORTHO05D005066 6.4e-29 131.0 118 62.7
TAR365G1163 Trochodendron aralioides HOM05D001137 ORTHO05D005066 6.4e-29 131.0 118 61.9
A10p20970 Brassica napus HOM05D001137 ORTHO05D005066 8.3e-29 130.6 119 61.3
BraA10t44162Z Brassica rapa HOM05D001137 ORTHO05D005066 8.3e-29 130.6 119 61.3
BcaC04g18664 Brassica carinata HOM05D001137 ORTHO05D005066 1.1e-28 130.2 119 61.3
C09p57890 Brassica napus HOM05D001137 ORTHO05D005066 1.1e-28 130.2 119 61.3
BolC9t58657H Brassica oleracea HOM05D001137 ORTHO05D005066 1.1e-28 130.2 119 61.3
CANSAT78G1005 Cannabis sativa HOM05D001137 ORTHO05D005066 1.1e-28 130.2 120 60.0
Gorai.006G264600 Gossypium raimondii HOM05D001137 ORTHO05D005066 2.4e-28 129.0 119 62.2
BcaB08g36660 Brassica carinata HOM05D001137 ORTHO05D005066 3.2e-28 128.6 118 58.5
Eucgr.H03862 Eucalyptus grandis HOM05D001137 ORTHO05D005066 3.2e-28 128.6 118 58.5
Gohir.A09G240400 Gossypium hirsutum HOM05D001137 ORTHO05D005066 5.4e-28 127.9 119 61.3
CARHR194430 Cardamine hirsuta HOM05D001137 ORTHO05D005066 9.2e-28 127.1 118 55.9
EL10Ac7g16750 Beta vulgaris HOM05D001137 ORTHO05D005066 1.2e-27 126.7 120 58.3
THA.LOC104802721 Tarenaya hassleriana HOM05D001137 ORTHO05D005066 1.6e-27 126.3 118 56.8
Sp6g25740 Schrenkiella parvula HOM05D001137 ORTHO05D005066 2.0e-27 125.9 118 57.6
AT5G18590 Arabidopsis thaliana HOM05D001137 ORTHO05D005066 2.7e-27 125.6 118 56.8
Gohir.A10G161500 Gossypium hirsutum HOM05D001137 ORTHO05D005066 5.9e-27 124.4 118 60.2
Gohir.D10G168000 Gossypium hirsutum HOM05D001137 ORTHO05D005066 7.8e-27 124.0 118 60.2
Gorai.011G187500 Gossypium raimondii HOM05D001137 ORTHO05D005066 7.8e-27 124.0 118 60.2
Glyma.07G250400 Glycine max HOM05D001137 ORTHO05D005066 1.0e-26 123.6 121 57.9
Duzib212G0615 Durio zibethinus HOM05D001137 ORTHO05D005066 1.3e-26 123.2 118 58.5
Thhalv10012828m.g Eutrema salsugineum HOM05D001137 ORTHO05D005066 1.3e-26 123.2 118 55.1
Aa31LG11G11030 Aethionema arabicum HOM05D001137 ORTHO05D005066 3.0e-26 122.1 119 59.7
Lsat_1_v5_gn_5_157341 Lactuca sativa HOM05D001137 ORTHO05D005066 2.5e-25 119.0 104 55.8
Psat4g027640 Pisum sativum HOM05D001137 ORTHO05D005066 5.6e-25 117.9 129 51.9
TPR.G14624 Trifolium pratense HOM05D001137 ORTHO05D005066 1.6e-24 116.3 127 54.3
Carub.0006s1687 Capsella rubella HOM05D001137 ORTHO05D005066 6.2e-24 114.4 118 51.7
HanXRQChr13g0388221 Helianthus annuus HOM05D001137 ORTHO05D005066 1.0e-23 113.6 120 55.0
Medtr4g119100 Medicago truncatula HOM05D001137 ORTHO05D005066 1.4e-23 113.2 131 52.7
arahy.Tifrunner.gnm1.ann1.SGL9NF Arachis hypogaea HOM05D001137 ORTHO05D005066 1.8e-23 112.8 122 55.7
Ca_21530_v3 Cicer arietinum L. HOM05D001137 ORTHO05D005066 5.2e-23 111.3 128 50.8
Ca_21539_v3 Cicer arietinum L. HOM05D001137 ORTHO05D005066 5.2e-23 111.3 128 50.8
Ca_21531_v3 Cicer arietinum L. HOM05D001137 ORTHO05D005066 8.9e-23 110.5 128 51.6
Lj3C813G4 Lonicera japonica HOM05D001137 ORTHO05D005066 4.4e-22 108.2 76 68.4
Zm00001eb165710 Zea mays HOM05D001137 ORTHO05D005066 5.8e-22 107.8 123 54.5
HPP92_015154 Vanilla planifolia HOM05D001137 ORTHO05D005066 3.7e-21 105.1 117 50.4
Os11g0657000 Oryza sativa ssp. japonica HOM05D001137 ORTHO05D005066 1.4e-20 103.2 127 51.2
AUR62031245 Chenopodium quinoa HOM05D001137 ORTHO05D005066 5.4e-20 101.3 73 65.8
Zm00001eb410440 Zea mays HOM05D001137 ORTHO05D005066 1.2e-19 100.1 117 51.3
SHI00310 Sapria himalayana HOM05D001137 ORTHO05D005066 1.5e-17 93.2 103 48.5
Os12g0538800 Oryza sativa ssp. japonica HOM05D001137 ORTHO05D005066 2.1e-16 89.4 117 45.3
arahy.Tifrunner.gnm1.ann1.HMK9CN Arachis hypogaea HOM05D001137 ORTHO05D005066 4.7e-16 88.2 54 74.1
unitig_748.g8583 Utricularia gibba HOM05D001137 ORTHO05D005066 8.1e-16 87.4 118 48.3
Glyma.03G112050 Glycine max HOM05D001137 ORTHO05D005066 6.8e-15 84.3 91 49.5
Glyma.17G181950 Glycine max HOM05D001137 ORTHO05D005066 6.8e-15 84.3 60 65.0
Oeu029261.1 Olea europaea HOM05D001137 ORTHO05D005066 3.2e-12 75.5 42 85.7
ATR0706G140 Amborella trichopoda HOM05D001137 ORTHO05D005066 4.1e-12 75.1 83 48.2
AL6G29860 Arabidopsis lyrata HOM05D001137 ORTHO05D005066 9.2e-12 73.9 42 81.0
SEGI_23102 Sequoiadendron giganteum HOM05D001137 ORTHO05D005066 2.3e-10 69.3 93 41.9
SEGI_27380 Sequoiadendron giganteum HOM05D001137 ORTHO05D005066 2.3e-10 69.3 93 41.9
Pp3c7_20910 Physcomitrium patens HOM05D001137 ORTHO05D005066 2.0e-06 56.2 46 54.3
Mapoly0008s0142 Marchantia polymorpha HOM05D001137 ORTHO05D005066 7.6e-06 54.3 114 32.5
AagrBONN_evm.TU.Sc2ySwM_344.1606 Anthoceros agrestis HOM05D001137 ORTHO05D005066 9.9e-06 53.9 65 46.2
CBR_g49333 Chara braunii HOM05D001137 ORTHO05D001967 9.9e-06 53.9 43 51.2


User provided reference genes

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