Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021607.1 Olea europaea HOM05D001638 ORTHO05D005197 1.2e-26 122.5 65 100.0
Oeu051899.1 Olea europaea HOM05D001638 ORTHO05D005197 5.6e-24 113.6 65 90.8
Lsat_1_v5_gn_4_15080 Lactuca sativa HOM05D001638 ORTHO05D005197 4.6e-18 94.0 64 71.9
Sc02g0002980 Simmondsia chinensis HOM05D001638 ORTHO05D005197 6.0e-18 93.6 63 74.6
HanXRQChr14g0428901 Helianthus annuus HOM05D001638 ORTHO05D005197 7.9e-18 93.2 64 73.4
Migut.N01781 Erythranthe guttata HOM05D001638 ORTHO05D005197 1.0e-17 92.8 59 78.0
Nn6g33853 Nelumbo nucifera HOM05D001638 ORTHO05D005197 1.0e-17 92.8 62 74.2
AUR62013726 Chenopodium quinoa HOM05D001638 ORTHO05D005197 1.8e-17 92.0 63 73.0
SalBow6G5432 Salvia bowleyana HOM05D001638 ORTHO05D005197 1.8e-17 92.0 62 75.8
AUR62023428 Chenopodium quinoa HOM05D001638 ORTHO05D005197 2.3e-17 91.7 63 73.0
DCAR_023354 Daucus carota HOM05D001638 ORTHO05D005197 2.3e-17 91.7 61 72.1
Medtr5g064850 Medicago truncatula HOM05D001638 ORTHO05D005197 2.3e-17 91.7 63 73.0
SGA_v2.0_scaffold5G02962 Striga asiatica HOM05D001638 ORTHO05D005197 2.3e-17 91.7 62 75.8
Hund17077 Selenicereus undatus HOM05D001638 ORTHO05D005197 3.0e-17 91.3 63 71.4
COL.COLO4_25944 Corchorus olitorius HOM05D001638 ORTHO05D005197 3.9e-17 90.9 59 76.3
Peaxi162Scf00392g00227 Petunia axillaris HOM05D001638 ORTHO05D005197 3.9e-17 90.9 61 73.8
Psat0s3614g0040 Pisum sativum HOM05D001638 ORTHO05D005197 3.9e-17 90.9 63 69.8
Potri.019G085100 Populus trichocarpa HOM05D001638 ORTHO05D005197 3.9e-17 90.9 61 73.8
vmacro16776 Vaccinium macrocarpon HOM05D001638 ORTHO05D005197 3.9e-17 90.9 59 76.3
Medtr7g007890 Medicago truncatula HOM05D001638 ORTHO05D005197 5.1e-17 90.5 63 71.4
Ca_04112_v3 Cicer arietinum L. HOM05D001638 ORTHO05D005197 6.7e-17 90.1 63 69.8
HanXRQChr01g0007441 Helianthus annuus HOM05D001638 ORTHO05D005197 6.7e-17 90.1 61 73.8
CiPaw.14G021800 Carya illinoinensis HOM05D001638 ORTHO05D005197 8.7e-17 89.7 65 70.8
Thecc.02G084000 Theobroma cacao HOM05D001638 ORTHO05D005197 8.7e-17 89.7 65 70.8
Ah.03g133920 Amaranthus hybridus HOM05D001638 ORTHO05D005197 1.1e-16 89.4 60 75.0
arahy.Tifrunner.gnm1.ann1.9JI82G Arachis hypogaea HOM05D001638 ORTHO05D005197 1.1e-16 89.4 63 69.8
arahy.Tifrunner.gnm1.ann1.MQ0E05 Arachis hypogaea HOM05D001638 ORTHO05D005197 1.1e-16 89.4 63 69.8
Sabra19G0096200 Salix brachista HOM05D001638 ORTHO05D005197 1.1e-16 89.4 61 73.8
MSTRG.12501 Avicennia marina HOM05D001638 ORTHO05D005197 1.5e-16 89.0 62 71.0
Manes.01G272000 Manihot esculenta HOM05D001638 ORTHO05D005197 1.5e-16 89.0 65 70.8
VMungo1383G3402 Vigna mungo HOM05D001638 ORTHO05D005197 1.9e-16 88.6 63 69.8
Cfa011091 Carpinus fangiana HOM05D001638 ORTHO05D005197 2.5e-16 88.2 62 72.6
Duzib132G0757 Durio zibethinus HOM05D001638 ORTHO05D005197 2.5e-16 88.2 59 74.6
Eucgr.F04452 Eucalyptus grandis HOM05D001638 ORTHO05D005197 2.5e-16 88.2 62 69.4
Lalb_Chr19g0127051 Lupinus albus HOM05D001638 ORTHO05D005197 2.5e-16 88.2 57 77.2
Gohir.A13G033800 Gossypium hirsutum HOM05D001638 ORTHO05D005197 3.3e-16 87.8 58 75.9
QL01p011221 Quercus lobata HOM05D001638 ORTHO05D005197 3.3e-16 87.8 64 70.3
EL10Ac1g00784 Beta vulgaris HOM05D001638 ORTHO05D005197 4.3e-16 87.4 63 69.8
Dinv44076 Davidia involucrata HOM05D001638 ORTHO05D005197 4.3e-16 87.4 63 69.8
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 4.3e-16 87.4 65 67.7
QL04p031108 Quercus lobata HOM05D001638 ORTHO05D005197 4.3e-16 87.4 62 72.6
Dinv43635 Davidia involucrata HOM05D001638 ORTHO05D005197 5.7e-16 87.0 62 71.0
TAR629G0136 Trochodendron aralioides HOM05D001638 ORTHO05D005197 5.7e-16 87.0 62 69.4
GSVIVG01018246001 Vitis vinifera HOM05D001638 ORTHO05D005197 5.7e-16 87.0 66 71.2
Ciclev10015475m.g Citrus clementina HOM05D001638 ORTHO05D005197 7.4e-16 86.7 62 69.4
Gohir.D13G032100 Gossypium hirsutum HOM05D001638 ORTHO05D005197 7.4e-16 86.7 58 75.9
Gorai.013G036600 Gossypium raimondii HOM05D001638 ORTHO05D005197 7.4e-16 86.7 58 75.9
Rhsim07G0034600 Rhododendron simsii HOM05D001638 ORTHO05D005197 7.4e-16 86.7 59 72.9
CSS0022011 Camellia sinensis var. sinensis HOM05D001638 ORTHO05D005197 9.6e-16 86.3 62 67.7
Actinidia40391 Actinidia chinensis HOM05D001638 ORTHO05D005197 1.3e-15 85.9 59 71.2
TPR.G11809 Trifolium pratense HOM05D001638 ORTHO05D005197 1.6e-15 85.5 63 66.7
Thhalv10004255m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 2.1e-15 85.1 62 67.7
LjContig00564g0006049 Lotus japonicus HOM05D001638 ORTHO05D005197 2.1e-15 85.1 63 66.7
Carub.0008s2200 Capsella rubella HOM05D001638 ORTHO05D005197 2.8e-15 84.7 62 67.7
Glyma.18G253900 Glycine max HOM05D001638 ORTHO05D005197 2.8e-15 84.7 63 66.7
arahy.Tifrunner.gnm1.ann1.XV6DNZ Arachis hypogaea HOM05D001638 ORTHO05D005197 3.7e-15 84.3 60 68.3
DCAR_029773 Daucus carota HOM05D001638 ORTHO05D005197 3.7e-15 84.3 61 68.9
AL1G10102 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 4.8e-15 84.0 62 69.4
AL8G37990 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 4.8e-15 84.0 62 69.4
CARHR275090 Cardamine hirsuta HOM05D001638 ORTHO05D005197 4.8e-15 84.0 62 66.1
Sp2g24540 Schrenkiella parvula HOM05D001638 ORTHO05D005197 4.8e-15 84.0 58 70.7
AT5G61330 Arabidopsis thaliana HOM05D001638 ORTHO05D005197 6.3e-15 83.6 62 67.7
A03p46940 Brassica napus HOM05D001638 ORTHO05D005197 8.2e-15 83.2 58 70.7
BraA03t13813Z Brassica rapa HOM05D001638 ORTHO05D005197 8.2e-15 83.2 58 70.7
PGR031G2794 Punica granatum HOM05D001638 ORTHO05D005197 8.2e-15 83.2 62 67.7
BcaC06g33229 Brassica carinata HOM05D001638 ORTHO05D005197 1.4e-14 82.4 62 66.1
Glyma.09G089400 Glycine max HOM05D001638 ORTHO05D005197 1.4e-14 82.4 63 65.1
THA.LOC104818326 Tarenaya hassleriana HOM05D001638 ORTHO05D005197 1.4e-14 82.4 60 68.3
PSO017G3357 Papaver somniferum HOM05D001638 ORTHO05D005197 1.8e-14 82.0 56 73.2
PSO170G6800 Papaver somniferum HOM05D001638 ORTHO05D005197 1.8e-14 82.0 56 73.2
Phvul.008G045000 Phaseolus vulgaris HOM05D001638 ORTHO05D005197 1.8e-14 82.0 63 63.5
BcaB04g19906 Brassica carinata HOM05D001638 ORTHO05D005197 2.4e-14 81.6 61 65.6
BcaC04g23457 Brassica carinata HOM05D001638 ORTHO05D005197 3.1e-14 81.3 58 70.7
A09p07280 Brassica napus HOM05D001638 ORTHO05D005197 3.1e-14 81.3 58 70.7
C07p44980 Brassica napus HOM05D001638 ORTHO05D005197 3.1e-14 81.3 58 69.0
C09p08140 Brassica napus HOM05D001638 ORTHO05D005197 3.1e-14 81.3 58 70.7
BolC9t53726H Brassica oleracea HOM05D001638 ORTHO05D005197 3.1e-14 81.3 58 70.7
BraA09t36377Z Brassica rapa HOM05D001638 ORTHO05D005197 3.1e-14 81.3 58 70.7
MBI04_g36329_MAGBIO Magnolia biondii HOM05D001638 ORTHO05D005197 3.1e-14 81.3 61 65.6
Actinidia12157 Actinidia chinensis HOM05D001638 ORTHO05D005197 4.1e-14 80.9 59 67.8
Aqoxy7G00848 Aquilegia oxysepala HOM05D001638 ORTHO05D005197 4.1e-14 80.9 64 62.5
PSO541G3735 Papaver somniferum HOM05D001638 ORTHO05D005197 4.1e-14 80.9 56 71.4
TWI23G0567 Tripterygium wilfordii HOM05D001638 ORTHO05D005197 4.1e-14 80.9 62 69.4
Cc02_g24880 Coffea canephora HOM05D001638 ORTHO05D005197 9.0e-14 79.7 61 63.9
Lsat_1_v5_gn_4_70960 Lactuca sativa HOM05D001638 ORTHO05D005197 9.0e-14 79.7 62 66.1
Os01g0526200 Oryza sativa ssp. japonica HOM05D001638 ORTHO05D005197 9.0e-14 79.7 63 65.1
TAR636G3630 Trochodendron aralioides HOM05D001638 ORTHO05D005197 9.0e-14 79.7 56 71.4
unitig_37.g13004 Utricularia gibba HOM05D000186 ORTHO05D001124 1.2e-13 79.3 61 67.2
CANSAT56G0649 Cannabis sativa HOM05D001638 ORTHO05D005197 2.0e-13 78.6 58 67.2
Prupe.2G127200 Prunus persica HOM05D001638 ORTHO05D005197 2.0e-13 78.6 65 69.2
BolC7t45021H Brassica oleracea HOM05D001638 ORTHO05D005197 3.4e-13 77.8 58 65.5
CAN.G362.16 Capsicum annuum HOM05D001638 ORTHO05D005197 4.5e-13 77.4 53 73.6
Thhalv10020921m.g Eutrema salsugineum HOM05D001638 ORTHO05D005197 4.5e-13 77.4 59 66.1
Zm00001eb127190 Zea mays HOM05D001638 ORTHO05D005197 7.6e-13 76.6 54 72.2
Zm00001eb333990 Zea mays HOM05D001638 ORTHO05D005197 1.0e-12 76.3 54 70.4
MD02G1217000 Malus domestica HOM05D001638 ORTHO05D005197 1.7e-12 75.5 65 64.6
ClCG05G000380 Citrullus lanatus HOM05D001638 ORTHO05D005197 3.8e-12 74.3 62 61.3
Haze_17173 Corylus avellana HOM05D001638 ORTHO05D005197 3.8e-12 74.3 62 66.1
MELO3C005976.2 Cucumis melo HOM05D001638 ORTHO05D005197 8.4e-12 73.2 62 61.3
CsaV3_3G007540 Cucumis sativus L. HOM05D001638 ORTHO05D005197 8.4e-12 73.2 62 61.3
CDE03G0227 Ceratophyllum demersum HOM05D001638 ORTHO05D005197 1.1e-11 72.8 56 64.3
Sed0004454 Sechium edule HOM05D001638 ORTHO05D005197 2.5e-11 71.6 62 59.7
Solyc01g090470.3 Solanum lycopersicum HOM05D001638 ORTHO05D005197 3.2e-11 71.2 54 70.4
Sopen01g036260 Solanum pennellii HOM05D001638 ORTHO05D005197 3.2e-11 71.2 54 70.4
PGSC0003DMG400026041 Solanum tuberosum HOM05D001638 ORTHO05D005197 3.2e-11 71.2 54 70.4
MD02G1264000 Malus domestica HOM05D001638 ORTHO05D005197 4.2e-11 70.9 65 63.1
ATR0057G068 Amborella trichopoda HOM05D001638 ORTHO05D005197 5.5e-11 70.5 59 64.4
SEGI_12976 Sequoiadendron giganteum HOM05D001638 ORTHO05D005197 5.5e-11 70.5 50 74.0
FvH4_7g09810 Fragaria vesca HOM05D001638 ORTHO05D005197 2.1e-10 68.6 64 62.5
FAN01G1872 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.1e-10 68.6 64 62.5
FAN06G3795 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.1e-10 68.6 64 62.5
FAN10G1788 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.1e-10 68.6 64 62.5
FAN10G2339 Fragaria x ananassa HOM05D001638 ORTHO05D005197 2.1e-10 68.6 64 62.5
Pp3c5_7370 Physcomitrium patens HOM05D001638 ORTHO05D005197 3.5e-10 67.8 56 64.3
RcHm_v2.0_Chr1g0346971 Rosa chinensis HOM05D001638 ORTHO05D005197 3.5e-10 67.8 67 59.7
Aa31LG11G2080 Aethionema arabicum HOM05D001638 ORTHO05D005197 6.1e-10 67.0 61 59.0
Atru.chr5.165 Acer truncatum HOM05D001638 ORTHO05D005197 3.0e-09 64.7 48 75.0
Mapoly0029s0122 Marchantia polymorpha HOM05D001638 ORTHO05D005197 5.1e-09 63.9 54 59.3
AL4G38750 Arabidopsis lyrata HOM05D001638 ORTHO05D005197 1.5e-08 62.4 40 77.5
HPP92_024242 Vanilla planifolia HOM05D001638 ORTHO05D005197 1.6e-07 58.9 58 58.6
AagrBONN_evm.TU.Sc2ySwM_368.1521 Anthoceros agrestis HOM05D001638 ORTHO05D005197 4.8e-07 57.4 60 53.3
Cre13.g587000 Chlamydomonas reinhardtii HOM05D001638 ORTHO05D005197 8.2e-07 56.6 48 60.4
MCO04G285 Micromonas commoda HOM05D001638 ORTHO05D005197 9.0e-06 53.1 47 57.4
SHI03505 Sapria himalayana HOM05D001638 ORTHO05D005197 9.0e-06 53.1 47 55.3


User provided reference genes

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