Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021569.1 Olea europaea HOM05D003796 ORTHO05D004486 3.3e-69 265.0 141 100.0
MSTRG.22023 Avicennia marina HOM05D003796 ORTHO05D004486 1.6e-36 156.4 143 61.5
TAR362G0252 Trochodendron aralioides HOM05D003796 ORTHO05D004486 1.8e-27 126.3 83 75.9
Hma1.2p1_0150F.1_g066730 Hydrangea macrophylla HOM05D003796 ORTHO05D004486 3.1e-27 125.6 141 50.4
SGA_v2.0_scaffold25G10998 Striga asiatica HOM05D003796 ORTHO05D004486 9.1e-27 124.0 123 56.1
Cpa.g.sc9.357 Carica papaya HOM05D003796 ORTHO05D004486 1.3e-25 120.2 96 62.5
Migut.N03072 Erythranthe guttata HOM05D003796 ORTHO05D004486 5.0e-25 118.2 85 71.8
Atru.chr4.1395 Acer truncatum HOM05D003796 ORTHO05D004486 6.5e-25 117.9 140 45.0
CAN.G1432.20 Capsicum annuum HOM05D003796 ORTHO05D004486 1.1e-24 117.1 137 48.2
Sopen06g031300 Solanum pennellii HOM05D003796 ORTHO05D004486 1.9e-24 116.3 143 49.0
Cc06_g21590 Coffea canephora HOM05D003796 ORTHO05D004486 3.2e-24 115.5 142 50.7
MELO3C022427.2 Cucumis melo HOM05D003796 ORTHO05D004486 4.2e-24 115.2 90 62.2
Dinv33197 Davidia involucrata HOM05D003796 ORTHO05D004486 4.2e-24 115.2 147 50.3
PGSC0003DMG401007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 7.2e-24 114.4 141 48.2
CiPaw.01G171300 Carya illinoinensis HOM05D003796 ORTHO05D004486 9.4e-24 114.0 139 47.5
Lsat_1_v5_gn_3_110880 Lactuca sativa HOM05D003796 ORTHO05D004486 1.2e-23 113.6 128 54.7
Nn7g37675 Nelumbo nucifera HOM05D003796 ORTHO05D004486 1.2e-23 113.6 81 70.4
Solyc06g074890.1 Solanum lycopersicum HOM05D003796 ORTHO05D004486 1.6e-23 113.2 143 47.6
CsaV3_6G007010 Cucumis sativus L. HOM05D003796 ORTHO05D004486 2.1e-23 112.8 90 62.2
Actinidia28983 Actinidia chinensis HOM05D003796 ORTHO05D004486 7.9e-23 110.9 123 52.8
Nitab4.5_0007977g0020 Nicotiana tabacum HOM05D003796 ORTHO05D004486 7.9e-23 110.9 138 47.8
GSVIVG01038135001 Vitis vinifera HOM05D003796 ORTHO05D004486 1.0e-22 110.5 102 56.9
HanXRQChr13g0418501 Helianthus annuus HOM05D003796 ORTHO05D004486 1.4e-22 110.2 127 50.4
CDE04G0900 Ceratophyllum demersum HOM05D003796 ORTHO05D004486 3.9e-22 108.6 74 70.3
Manes.11G130100 Manihot esculenta HOM05D003796 ORTHO05D004486 3.9e-22 108.6 127 49.6
QL93p1902_0792 Quercus lobata HOM05D003796 ORTHO05D004486 3.9e-22 108.6 134 48.5
FAN22G2021 Fragaria x ananassa HOM05D003796 ORTHO05D004486 5.1e-22 108.2 133 48.1
Prupe.1G586900 Prunus persica HOM05D003796 ORTHO05D004486 5.1e-22 108.2 117 52.1
Sabra13G0104400 Salix brachista HOM05D003796 ORTHO05D004486 5.1e-22 108.2 97 54.6
EL10Ac3g06067 Beta vulgaris HOM05D003796 ORTHO05D004486 2.0e-21 106.3 81 64.2
MD08G1249800 Malus domestica HOM05D003796 ORTHO05D004486 2.0e-21 106.3 89 62.9
Ah.13g073570 Amaranthus hybridus HOM05D003796 ORTHO05D004486 2.6e-21 105.9 79 65.8
Lj3g0002298 Lotus japonicus HOM05D003796 ORTHO05D004486 2.6e-21 105.9 89 61.8
QL10p054554 Quercus lobata HOM05D003796 ORTHO05D004486 2.6e-21 105.9 89 60.7
QL10p054570 Quercus lobata HOM05D003796 ORTHO05D004486 2.6e-21 105.9 89 60.7
Sed0014142 Sechium edule HOM05D003796 ORTHO05D004486 2.6e-21 105.9 83 63.9
Potri.013G125600 Populus trichocarpa HOM05D003796 ORTHO05D004486 3.3e-21 105.5 97 53.6
RcHm_v2.0_Chr4g0406061 Rosa chinensis HOM05D003796 ORTHO05D004486 3.3e-21 105.5 109 52.3
MBI08_g25562_MAGBIO Magnolia biondii HOM05D003796 ORTHO05D004486 5.7e-21 104.8 76 68.4
Peaxi162Scf00568g00527 Petunia axillaris HOM05D003796 ORTHO05D004486 7.4e-21 104.4 125 51.2
Ciclev10021832m.g Citrus clementina HOM05D003796 ORTHO05D004486 9.7e-21 104.0 98 56.1
ECA240G0037 Erigeron canadensis HOM05D003796 ORTHO05D004486 1.7e-20 103.2 82 62.2
Glyma.12G048900 Glycine max HOM05D003796 ORTHO05D004486 3.7e-20 102.1 89 59.6
TWI63G0811 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 3.7e-20 102.1 77 63.6
PGR042G0542 Punica granatum HOM05D003796 ORTHO05D004486 4.8e-20 101.7 79 63.3
Sopen06g031310 Solanum pennellii HOM05D003796 ORTHO05D004486 8.2e-20 100.9 143 45.5
Solyc06g074900.3 Solanum lycopersicum HOM05D003796 ORTHO05D004486 1.1e-19 100.5 143 44.8
FAN07G1083 Fragaria x ananassa HOM05D003796 ORTHO05D004486 1.4e-19 100.1 128 46.9
Duzib268G1213 Durio zibethinus HOM05D003796 ORTHO05D004486 1.8e-19 99.8 77 61.0
Gohir.A05G327600 Gossypium hirsutum HOM05D003796 ORTHO05D004486 1.8e-19 99.8 77 62.3
Gohir.D05G328000 Gossypium hirsutum HOM05D003796 ORTHO05D004486 1.8e-19 99.8 77 62.3
Gorai.009G351700 Gossypium raimondii HOM05D003796 ORTHO05D004486 1.8e-19 99.8 77 62.3
VMungo1127G1870 Vigna mungo HOM05D003796 ORTHO05D004486 2.4e-19 99.4 76 64.5
Lalb_Chr19g0138481 Lupinus albus HOM05D003796 ORTHO05D004486 3.1e-19 99.0 81 61.7
AUR62002376 Chenopodium quinoa HOM05D003796 ORTHO05D004486 4.1e-19 98.6 82 61.0
AUR62023807 Chenopodium quinoa HOM05D003796 ORTHO05D004486 5.3e-19 98.2 82 61.0
FAN12G2909 Fragaria x ananassa HOM05D003796 ORTHO05D004486 5.3e-19 98.2 133 46.6
CANSAT35G0237 Cannabis sativa HOM05D003796 ORTHO05D004486 6.9e-19 97.8 79 63.3
PGSC0003DMG402007138 Solanum tuberosum HOM05D003796 ORTHO05D004486 1.2e-18 97.1 143 43.4
Ca_20812_v3 Cicer arietinum L. HOM05D003796 ORTHO05D004486 2.0e-18 96.3 80 61.2
FvH4_4g10500 Fragaria vesca HOM05D003796 ORTHO05D004486 2.0e-18 96.3 115 51.3
FAN12G1593 Fragaria x ananassa HOM05D003796 ORTHO05D004486 2.6e-18 95.9 132 45.5
Medtr4g068280 Medicago truncatula HOM05D003796 ORTHO05D004486 3.4e-18 95.5 89 58.4
CAN.G1001.53 Capsicum annuum HOM05D003796 ORTHO05D004486 1.7e-17 93.2 136 41.9
Phvul.011G051000 Phaseolus vulgaris HOM05D003796 ORTHO05D004486 1.7e-17 93.2 119 43.7
arahy.Tifrunner.gnm1.ann1.P7R60W Arachis hypogaea HOM05D003796 ORTHO05D004486 2.9e-17 92.4 74 63.5
Aqoxy2G01069 Aquilegia oxysepala HOM05D003796 ORTHO05D004486 3.2e-16 89.0 138 39.1
PSO832G1541 Papaver somniferum HOM05D003796 ORTHO05D004486 1.2e-15 87.0 73 58.9
TWI63G1493 Tripterygium wilfordii HOM05D003796 ORTHO05D004486 2.1e-15 86.3 78 57.7
TPR.G10226 Trifolium pratense HOM05D003796 ORTHO05D004486 6.1e-15 84.7 97 48.5
ATR0075G004 Amborella trichopoda HOM05D003796 ORTHO05D004486 1.4e-14 83.6 75 56.0
arahy.Tifrunner.gnm1.ann1.I4880T Arachis hypogaea HOM05D003796 ORTHO05D004486 3.9e-14 82.0 90 52.2
PSO210G4043 Papaver somniferum HOM05D003796 ORTHO05D004486 6.7e-14 81.3 87 49.4
Os01g0894700 Oryza sativa ssp. japonica HOM05D003796 ORTHO05D004486 2.6e-13 79.3 79 54.4
Zm00001eb144880 Zea mays HOM05D003796 ORTHO05D004486 6.3e-12 74.7 112 42.0
SEGI_15351 Sequoiadendron giganteum HOM05D003796 ORTHO05D004486 5.3e-11 71.6 81 49.4
Sc19g0002760 Simmondsia chinensis HOM05D003796 ORTHO05D004486 1.6e-10 70.1 45 71.1
CBR_g31497 Chara braunii HOM05D003796 ORTHO05D004486 1.7e-09 66.6 67 46.3
AagrBONN_evm.TU.Sc2ySwM_117.3751 Anthoceros agrestis HOM05D003796 ORTHO05D004486 3.8e-09 65.5 73 47.9
Hund03191 Selenicereus undatus HOM05D003796 ORTHO05D004486 3.2e-08 62.4 82 46.3
Pp3c14_20300 Physcomitrium patens HOM05D003796 ORTHO05D004486 7.2e-08 61.2 67 46.3
Psat7g207840 Pisum sativum HOM05D003796 ORTHO05D004486 6.1e-07 58.2 37 67.6
CSS0039071 Camellia sinensis var. sinensis HOM05D055008 ORTHO05D043295 1.0e-06 57.4 51 64.7
ClCG06G001080 Citrullus lanatus HOM05D003796 ORTHO05D004486 1.4e-06 57.0 43 62.8
VMungo1080G1154 Vigna mungo HOM05D003796 ORTHO05D004486 1.8e-06 56.6 92 37.0
CSS0019445 Camellia sinensis var. sinensis HOM05D055008 ORTHO05D043295 4.0e-06 55.5 50 64.0


User provided reference genes

Program Settings