Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 3.6e-173 611.7 353 100.0
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 9.9e-115 417.5 354 71.2
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 5.0e-50 202.6 361 44.6
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.5e-38 164.5 354 39.3
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 9.8e-38 161.8 352 37.8
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 2.2e-37 160.6 378 38.9
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 1.5e-30 137.9 291 42.3
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 4.4e-30 136.3 357 38.4
MSTRG.7455 Avicennia marina HOM05D012266 ORTHO05D011876 5.0e-26 122.9 353 33.1
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 1.6e-24 117.9 327 36.7
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 1.7e-21 107.8 334 35.3
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 3.7e-21 106.7 369 31.7
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 3.5e-19 100.1 374 29.4
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 3.3e-17 93.6 430 30.5
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 4.3e-17 93.2 356 33.7
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 4.3e-17 93.2 381 32.8
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 6.2e-16 89.4 477 28.1
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 8.1e-16 89.0 365 30.4
Sopen02g020380 Solanum pennellii HOM05D012094 ORTHO05D011876 1.4e-15 88.2 428 31.1
CSS0047309 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 2.4e-15 87.4 445 29.9
Migut.M00961 Erythranthe guttata HOM05D012266 ORTHO05D011876 1.7e-13 81.3 102 46.1
SGA_v2.0_scaffold123G33463 Striga asiatica HOM05D012266 ORTHO05D011876 2.2e-13 80.9 345 32.8
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 2.9e-13 80.5 330 32.1
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 3.8e-13 80.1 372 32.0
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 4.9e-13 79.7 373 30.0
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 6.4e-13 79.3 269 34.2
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 3.2e-12 77.0 368 32.3
Manes.15G116600 Manihot esculenta HOM05D009852 ORTHO05D009761 9.2e-12 75.5 396 30.3
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.6e-11 74.7 166 36.1
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 2.1e-11 74.3 372 31.5
Solyc02g071320.4 Solanum lycopersicum HOM05D012094 ORTHO05D011876 2.7e-11 73.9 362 30.9
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 4.6e-11 73.2 194 34.0
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 4.6e-11 73.2 365 29.6
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 1.3e-10 71.6 330 30.9
Manes.17G064400 Manihot esculenta HOM05D009852 ORTHO05D009761 3.9e-10 70.1 401 32.9
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 3.9e-10 70.1 400 31.0
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 5.1e-10 69.7 372 30.4
Potri.011G077700 Populus trichocarpa HOM05D009852 ORTHO05D009761 5.1e-10 69.7 376 24.5
Rhsim02G0193600 Rhododendron simsii HOM05D014645 ORTHO05D009761 5.1e-10 69.7 373 27.1
Lalb_Chr07g0186121 Lupinus albus HOM05D009013 ORTHO05D009761 6.6e-10 69.3 366 28.1
Sopen03g001860 Solanum pennellii HOM05D012094 ORTHO05D011876 8.7e-10 68.9 339 27.4
Lalb_Chr12g0204801 Lupinus albus HOM05D009013 ORTHO05D009761 1.1e-09 68.6 367 27.0
Cc00_g03210 Coffea canephora HOM05D012094 ORTHO05D009761 1.5e-09 68.2 356 27.5
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 1.9e-09 67.8 241 32.0
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.9e-09 67.8 375 27.2
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 3.3e-09 67.0 288 29.9
CANSAT35G0309 Cannabis sativa HOM05D009013 ORTHO05D009761 4.3e-09 66.6 332 29.2
TWI73G0525 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 4.3e-09 66.6 374 27.8
TWI09G0214 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 7.3e-09 65.9 375 26.9
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.2e-08 65.1 122 38.5
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 2.1e-08 64.3 122 38.5
Peaxi162Scf00653g00416 Petunia axillaris HOM05D012094 ORTHO05D011876 6.2e-08 62.8 319 27.6
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.1e-07 62.0 166 32.5
Cfa001036 Carpinus fangiana HOM05D009013 ORTHO05D009761 1.4e-07 61.6 370 30.8
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 4.0e-07 60.1 370 27.6
Glyma.08G121600 Glycine max HOM05D009013 ORTHO05D009761 6.9e-07 59.3 372 28.0
SGA_v2.0_scaffold333G49024 Striga asiatica HOM05D012266 ORTHO05D011876 6.9e-07 59.3 73 37.0
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 9.0e-07 58.9 371 27.5
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 9.0e-07 58.9 361 31.3
Duzib192G0106 Durio zibethinus HOM05D009852 ORTHO05D009761 3.4e-06 57.0 380 30.5
TAR624G0539 Trochodendron aralioides HOM05D041535 ORTHO05D009761 7.6e-06 55.8 229 29.7


User provided reference genes

Program Settings