Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021408.1 Olea europaea HOM05D003131 ORTHO05D003761 5.8e-43 177.2 91 100.0
Solyc07g064250.3 Solanum lycopersicum HOM05D003131 ORTHO05D003761 2.7e-16 88.6 78 64.1
Sopen07g032400 Solanum pennellii HOM05D003131 ORTHO05D003761 2.7e-16 88.6 78 64.1
MSTRG.15165 Avicennia marina HOM05D003131 ORTHO05D003761 4.6e-16 87.8 78 62.8
Cc05_g13370 Coffea canephora HOM05D003131 ORTHO05D003761 6.1e-16 87.4 78 64.1
PGSC0003DMG400001047 Solanum tuberosum HOM05D003131 ORTHO05D003761 7.9e-16 87.0 78 62.8
Oeu032446.3 Olea europaea HOM05D003131 ORTHO05D003761 1.0e-15 86.7 78 61.5
MSTRG.6898 Avicennia marina HOM05D003131 ORTHO05D003761 1.4e-15 86.3 78 60.3
Lj1A867T32 Lonicera japonica HOM05D003131 ORTHO05D003761 1.4e-15 86.3 78 62.8
Peaxi162Scf00450g00865 Petunia axillaris HOM05D003131 ORTHO05D003761 3.0e-15 85.1 78 61.5
SGA_v2.0_scaffold266G46141 Striga asiatica HOM05D003131 ORTHO05D003761 3.0e-15 85.1 78 62.8
Nitab4.5_0000397g0240 Nicotiana tabacum HOM05D003131 ORTHO05D003761 8.8e-15 83.6 78 62.8
Nitab4.5_0003452g0020 Nicotiana tabacum HOM05D003131 ORTHO05D003761 8.8e-15 83.6 78 62.8
Dinv40726 Davidia involucrata HOM05D003131 ORTHO05D003761 3.3e-14 81.6 77 57.1
SGA_v2.0_scaffold9G05050 Striga asiatica HOM05D003131 ORTHO05D003761 3.3e-14 81.6 78 60.3
CAN.G337.99 Capsicum annuum HOM05D003131 ORTHO05D003761 7.4e-14 80.5 78 56.4
RcHm_v2.0_Chr5g0037841 Rosa chinensis HOM05D003131 ORTHO05D003761 9.7e-14 80.1 76 57.9
HanXRQChr11g0337911 Helianthus annuus HOM05D003131 ORTHO05D003761 1.3e-13 79.7 78 55.1
Migut.M01796 Erythranthe guttata HOM05D003131 ORTHO05D003761 1.7e-13 79.3 78 59.0
MD03G1209500 Malus domestica HOM05D003131 ORTHO05D003761 1.7e-13 79.3 76 60.5
HPP92_015954 Vanilla planifolia HOM05D003131 ORTHO05D003761 1.7e-13 79.3 73 60.3
Nn1g07062 Nelumbo nucifera HOM05D003131 ORTHO05D003761 2.2e-13 79.0 77 55.8
Oeu062607.1 Olea europaea HOM05D003131 ORTHO05D003761 2.2e-13 79.0 78 60.3
RhsimUnG0252300 Rhododendron simsii HOM05D003131 ORTHO05D003761 2.2e-13 79.0 79 60.8
FAN16G2989 Fragaria x ananassa HOM05D003131 ORTHO05D003761 2.8e-13 78.6 76 57.9
MD11G1224300 Malus domestica HOM05D003131 ORTHO05D003761 3.7e-13 78.2 76 59.2
Prupe.4G205600 Prunus persica HOM05D003131 ORTHO05D003761 3.7e-13 78.2 76 59.2
TAR629G1259 Trochodendron aralioides HOM05D003131 ORTHO05D003761 3.7e-13 78.2 74 59.5
Actinidia35326 Actinidia chinensis HOM05D003131 ORTHO05D003761 4.8e-13 77.8 78 51.3
FAN21G2752 Fragaria x ananassa HOM05D003131 ORTHO05D003761 4.8e-13 77.8 76 57.9
Eucgr.F03438 Eucalyptus grandis HOM05D003131 ORTHO05D003761 6.3e-13 77.4 75 61.3
Sc16g0006370 Simmondsia chinensis HOM05D003131 ORTHO05D003761 6.3e-13 77.4 74 59.5
vmacro09740 Vaccinium macrocarpon HOM05D003131 ORTHO05D003761 6.3e-13 77.4 78 56.4
GSVIVG01001983001 Vitis vinifera HOM05D003131 ORTHO05D003761 6.3e-13 77.4 77 58.4
FAN11G1541 Fragaria x ananassa HOM05D003131 ORTHO05D003761 1.1e-12 76.6 76 56.6
HPP92_015947 Vanilla planifolia HOM05D003131 ORTHO05D003761 1.1e-12 76.6 73 57.5
Actinidia09927 Actinidia chinensis HOM05D003131 ORTHO05D003761 1.4e-12 76.3 76 57.9
CiPaw.11G185300 Carya illinoinensis HOM05D003131 ORTHO05D003761 2.4e-12 75.5 75 58.7
Ciclev10008134m.g Citrus clementina HOM05D003131 ORTHO05D003761 2.4e-12 75.5 77 57.1
ECA236G2341 Erigeron canadensis HOM05D003131 ORTHO05D003761 2.4e-12 75.5 78 52.6
Aqoxy4G01971 Aquilegia oxysepala HOM05D003131 ORTHO05D003761 3.1e-12 75.1 76 56.6
unitig_0.g755 Utricularia gibba HOM05D003131 ORTHO05D003761 3.1e-12 75.1 60 68.3
ATR0697G255 Amborella trichopoda HOM05D003131 ORTHO05D003761 4.1e-12 74.7 77 55.8
Glyma.12G134500 Glycine max HOM05D003131 ORTHO05D003761 4.1e-12 74.7 76 55.3
Lsat_1_v5_gn_7_108961 Lactuca sativa HOM05D003131 ORTHO05D003761 4.1e-12 74.7 78 55.1
Os07g0524100 Oryza sativa ssp. japonica HOM05D003131 ORTHO05D003761 4.1e-12 74.7 73 58.9
VMungo1127G1954 Vigna mungo HOM05D003131 ORTHO05D003761 4.1e-12 74.7 76 53.9
THA.LOC104812532 Tarenaya hassleriana HOM05D003131 ORTHO05D003761 5.3e-12 74.3 77 54.5
vmacro11756 Vaccinium macrocarpon HOM05D003131 ORTHO05D003761 5.3e-12 74.3 74 56.8
arahy.Tifrunner.gnm1.ann1.78MI69 Arachis hypogaea HOM05D003131 ORTHO05D003761 6.9e-12 73.9 76 53.9
arahy.Tifrunner.gnm1.ann1.FX4D46 Arachis hypogaea HOM05D003131 ORTHO05D003761 6.9e-12 73.9 76 53.9
Ca_18858_v3 Cicer arietinum L. HOM05D003131 ORTHO05D003761 6.9e-12 73.9 75 54.7
Zm00001eb106180 Zea mays HOM05D003131 ORTHO05D003761 6.9e-12 73.9 73 57.5
COL.COLO4_09591 Corchorus olitorius HOM05D003131 ORTHO05D003761 9.1e-12 73.6 76 56.6
Manes.03G127900 Manihot esculenta HOM05D003131 ORTHO05D003761 9.1e-12 73.6 77 55.8
Psat7g162480 Pisum sativum HOM05D003131 ORTHO05D003761 9.1e-12 73.6 77 51.9
DCAR_022534 Daucus carota HOM05D003131 ORTHO05D003761 1.2e-11 73.2 78 53.8
Duzib213G0427 Durio zibethinus HOM05D003131 ORTHO05D003761 1.2e-11 73.2 77 55.8
Lj8A166G89 Lonicera japonica HOM05D003131 ORTHO05D003761 1.2e-11 73.2 78 56.4
Phvul.011G139400 Phaseolus vulgaris HOM05D003131 ORTHO05D003761 1.2e-11 73.2 76 52.6
PGR031G0436 Punica granatum HOM05D003131 ORTHO05D003761 1.2e-11 73.2 79 55.7
Sed0015465 Sechium edule HOM05D003131 ORTHO05D003761 1.2e-11 73.2 77 54.5
AUR62043223 Chenopodium quinoa HOM05D003131 ORTHO05D003761 1.5e-11 72.8 74 55.4
Lj3g0017739 Lotus japonicus HOM05D003131 ORTHO05D003761 1.5e-11 72.8 74 55.4
Cfa020401 Carpinus fangiana HOM05D003131 ORTHO05D003761 2.0e-11 72.4 75 57.3
Haze_09619 Corylus avellana HOM05D003131 ORTHO05D003761 2.0e-11 72.4 75 57.3
QL08p012668 Quercus lobata HOM05D003131 ORTHO05D003761 2.0e-11 72.4 74 58.1
CDE05G1183 Ceratophyllum demersum HOM05D003131 ORTHO05D003761 2.6e-11 72.0 78 51.3
ClCG05G014630 Citrullus lanatus HOM05D003131 ORTHO05D003761 2.6e-11 72.0 76 55.3
Gohir.D05G366000 Gossypium hirsutum HOM05D003131 ORTHO05D003761 2.6e-11 72.0 77 54.5
Medtr4g080800 Medicago truncatula HOM05D003131 ORTHO05D003761 2.6e-11 72.0 77 51.9
Phvul.005G092800 Phaseolus vulgaris HOM05D003131 ORTHO05D003761 2.6e-11 72.0 76 55.3
Thecc.07G050200 Theobroma cacao HOM05D003131 ORTHO05D003761 2.6e-11 72.0 77 54.5
TPR.G25904 Trifolium pratense HOM05D003131 ORTHO05D003761 2.6e-11 72.0 77 51.9
CDE11G0493 Ceratophyllum demersum HOM05D003131 ORTHO05D003761 3.4e-11 71.6 78 51.3
MELO3C018096.2 Cucumis melo HOM05D003131 ORTHO05D003761 3.4e-11 71.6 76 56.6
Gohir.A04G020700 Gossypium hirsutum HOM05D003131 ORTHO05D003761 3.4e-11 71.6 77 53.2
Gohir.A13G140500 Gossypium hirsutum HOM05D003131 ORTHO05D003761 3.4e-11 71.6 77 53.2
AL1G58680 Arabidopsis lyrata HOM05D003131 ORTHO05D003761 4.5e-11 71.2 76 53.9
CANSAT11G2205 Cannabis sativa HOM05D003131 ORTHO05D003761 4.5e-11 71.2 75 56.0
Carub.0001s3989 Capsella rubella HOM05D003131 ORTHO05D003761 4.5e-11 71.2 76 53.9
Thhalv10011436m.g Eutrema salsugineum HOM05D003131 ORTHO05D003761 4.5e-11 71.2 76 53.9
Glyma.06G270200 Glycine max HOM05D003131 ORTHO05D003761 4.5e-11 71.2 74 54.1
Hund23293 Selenicereus undatus HOM05D003131 ORTHO05D003761 5.9e-11 70.9 77 53.2
TWI38G0096 Tripterygium wilfordii HOM05D003131 ORTHO05D003761 5.9e-11 70.9 74 55.4
EL10Ac4g07936 Beta vulgaris HOM05D003131 ORTHO05D003761 7.7e-11 70.5 77 51.9
Ca_01736_v3 Cicer arietinum L. HOM05D003131 ORTHO05D003761 7.7e-11 70.5 76 53.9
Lalb_Chr19g0134801 Lupinus albus HOM05D003131 ORTHO05D003761 7.7e-11 70.5 74 54.1
PSO675G8799 Papaver somniferum HOM05D003131 ORTHO05D003761 7.7e-11 70.5 74 56.8
Gohir.D13G145300 Gossypium hirsutum HOM05D003131 ORTHO05D003761 1.0e-10 70.1 77 50.6
Potri.001G419300 Populus trichocarpa HOM05D003131 ORTHO05D003761 1.0e-10 70.1 74 55.4
Sabra16G0284800 Salix brachista HOM05D003131 ORTHO05D003761 1.0e-10 70.1 74 55.4
BcaB03g12526 Brassica carinata HOM05D003131 ORTHO05D003761 1.3e-10 69.7 76 53.9
TWI39G0275 Tripterygium wilfordii HOM05D003131 ORTHO05D003761 1.3e-10 69.7 74 55.4
VMungo1080G0160 Vigna mungo HOM05D003131 ORTHO05D003761 1.3e-10 69.7 76 53.9
Sed0022762 Sechium edule HOM05D003131 ORTHO05D003761 1.7e-10 69.3 74 54.1
arahy.Tifrunner.gnm1.ann1.B15YH7 Arachis hypogaea HOM05D003131 ORTHO05D003761 2.2e-10 68.9 76 51.3
CARHR234730 Cardamine hirsuta HOM05D003131 ORTHO05D003761 2.2e-10 68.9 76 53.9
Glyma.13G288600 Glycine max HOM05D003131 ORTHO05D003761 2.2e-10 68.9 76 50.0
Aa31LG5G10320 Aethionema arabicum HOM05D003131 ORTHO05D003761 2.9e-10 68.6 76 53.9
Ah.04g165590 Amaranthus hybridus HOM05D003131 ORTHO05D003761 2.9e-10 68.6 72 56.9
A08p20550 Brassica napus HOM05D003131 ORTHO05D003761 2.9e-10 68.6 76 52.6
BraA08t34011Z Brassica rapa HOM05D003131 ORTHO05D003761 2.9e-10 68.6 76 52.6
Glyma.12G213100 Glycine max HOM05D003131 ORTHO05D003761 2.9e-10 68.6 76 51.3
THA.LOC104817882 Tarenaya hassleriana HOM05D003131 ORTHO05D003761 2.9e-10 68.6 76 52.6
BcaC06g32712 Brassica carinata HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 52.6
BcaC07g38270 Brassica carinata HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 51.3
A03p57070 Brassica napus HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 52.6
C07p55000 Brassica napus HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 52.6
C08p10170 Brassica napus HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 51.3
BolC7t46012H Brassica oleracea HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 52.6
BolC8t48696H Brassica oleracea HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 51.3
BraA03t14777Z Brassica rapa HOM05D003131 ORTHO05D003761 3.8e-10 68.2 76 52.6
AT1G50950 Arabidopsis thaliana HOM05D003131 ORTHO05D003761 5.0e-10 67.8 76 52.6
arahy.Tifrunner.gnm1.ann1.E892WZ Arachis hypogaea HOM05D003131 ORTHO05D003761 5.0e-10 67.8 76 50.0
Lsat_1_v5_gn_5_81680 Lactuca sativa HOM05D003131 ORTHO05D003761 5.0e-10 67.8 75 52.0
PSO541G2817 Papaver somniferum HOM05D003131 ORTHO05D003761 5.0e-10 67.8 74 55.4
BcaB02g11198 Brassica carinata HOM05D003131 ORTHO05D003761 6.5e-10 67.4 76 50.0
CsaV3_3G023160 Cucumis sativus L. HOM05D003131 ORTHO05D003761 6.5e-10 67.4 76 53.9
CsaV3_UNG097730 Cucumis sativus L. HOM05D003131 ORTHO05D003761 6.5e-10 67.4 76 53.9
HanXRQChr03g0077341 Helianthus annuus HOM05D003131 ORTHO05D003761 6.5e-10 67.4 72 54.2
Psat5g252160 Pisum sativum HOM05D003131 ORTHO05D003761 6.5e-10 67.4 76 51.3
Atru.chr2.3237 Acer truncatum HOM05D003131 ORTHO05D003761 8.5e-10 67.0 82 51.2
Lalb_Chr01g0006071 Lupinus albus HOM05D003131 ORTHO05D003761 8.5e-10 67.0 71 53.5
Medtr2g083260 Medicago truncatula HOM05D003131 ORTHO05D003761 8.5e-10 67.0 76 50.0
Sabra11G0121200 Salix brachista HOM05D003131 ORTHO05D003761 8.5e-10 67.0 74 54.1
DCAR_010029 Daucus carota HOM05D003131 ORTHO05D003761 1.1e-09 66.6 78 48.7
Duzib170G1176 Durio zibethinus HOM05D003131 ORTHO05D003761 1.1e-09 66.6 77 51.9
FAN25G0818 Fragaria x ananassa HOM05D003131 ORTHO05D003761 1.1e-09 66.6 63 60.3
HanXRQChr13g0407701 Helianthus annuus HOM05D003131 ORTHO05D003761 1.1e-09 66.6 72 52.8
AL3G34420 Arabidopsis lyrata HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
AT3G20560 Arabidopsis thaliana HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
BcaB04g19114 Brassica carinata HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 47.4
A05p28280 Brassica napus HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
BraA05t21710Z Brassica rapa HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
CARHR040990 Cardamine hirsuta HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 51.3
Thhalv10020619m.g Eutrema salsugineum HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
Potri.011G135500 Populus trichocarpa HOM05D003131 ORTHO05D003761 1.4e-09 66.2 73 54.8
Sp1g37690 Schrenkiella parvula HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
Sp3g18580 Schrenkiella parvula HOM05D003131 ORTHO05D003761 1.4e-09 66.2 76 50.0
AL7G25720 Arabidopsis lyrata HOM05D003131 ORTHO05D003761 1.9e-09 65.9 67 58.2
AT4G27080 Arabidopsis thaliana HOM05D003131 ORTHO05D003761 1.9e-09 65.9 67 58.2
Lj3g0001988 Lotus japonicus HOM05D003131 ORTHO05D003761 2.5e-09 65.5 76 48.7
BcaB07g33537 Brassica carinata HOM05D003131 ORTHO05D003761 3.2e-09 65.1 79 49.4
BcaC05g27376 Brassica carinata HOM05D003131 ORTHO05D003761 3.2e-09 65.1 76 50.0
BcaC05g28315 Brassica carinata HOM05D003131 ORTHO05D003761 3.2e-09 65.1 76 48.7
BcaC08g43268 Brassica carinata HOM05D003131 ORTHO05D003761 3.2e-09 65.1 79 49.4
A05p19840 Brassica napus HOM05D003131 ORTHO05D003761 3.2e-09 65.1 76 50.0
A06p02790 Brassica napus HOM05D003131 ORTHO05D003761 3.2e-09 65.1 79 49.4
C05p33100 Brassica napus HOM05D003131 ORTHO05D003761 3.2e-09 65.1 76 50.0
C05p43760 Brassica napus HOM05D003131 ORTHO05D003761 3.2e-09 65.1 76 48.7
C06p06160 Brassica napus HOM05D003131 ORTHO05D003761 3.2e-09 65.1 79 49.4
BolC6t35727H Brassica oleracea HOM05D003131 ORTHO05D003761 3.2e-09 65.1 79 49.4
BraA05t20889Z Brassica rapa HOM05D003131 ORTHO05D003761 3.2e-09 65.1 76 50.0
BraA06t23486Z Brassica rapa HOM05D003131 ORTHO05D003761 3.2e-09 65.1 79 49.4
Carub.0007s1376 Capsella rubella HOM05D003131 ORTHO05D003761 3.2e-09 65.1 71 56.3
Lsat_1_v5_gn_5_4920 Lactuca sativa HOM05D003131 ORTHO05D003761 3.2e-09 65.1 65 52.3
Aa31LG8G7370 Aethionema arabicum HOM05D003131 ORTHO05D003761 4.2e-09 64.7 72 51.4
BolC5t33092H Brassica oleracea HOM05D003131 ORTHO05D003761 4.2e-09 64.7 76 48.7
Thhalv10025074m.g Eutrema salsugineum HOM05D003131 ORTHO05D003761 4.2e-09 64.7 71 56.3
BraA03t13334Z Brassica rapa HOM05D003131 ORTHO05D003761 5.5e-09 64.3 76 46.1
BcaC01g03549 Brassica carinata HOM05D003131 ORTHO05D003761 7.2e-09 63.9 76 47.4
C03p51190 Brassica napus HOM05D003131 ORTHO05D003761 7.2e-09 63.9 76 47.4
BolC3t17408H Brassica oleracea HOM05D003131 ORTHO05D003761 7.2e-09 63.9 76 47.4
A03p41810 Brassica napus HOM05D003131 ORTHO05D003761 9.4e-09 63.5 76 46.1
CARHR096350 Cardamine hirsuta HOM05D003131 ORTHO05D003761 9.4e-09 63.5 69 50.7
ECA240G3179 Erigeron canadensis HOM05D003131 ORTHO05D003761 1.2e-08 63.2 72 48.6
Lalb_Chr14g0366231 Lupinus albus HOM05D003131 ORTHO05D003761 1.2e-08 63.2 74 51.4
BcaB06g26121 Brassica carinata HOM05D003131 ORTHO05D003761 2.1e-08 62.4 72 50.0
CSS0010531 Camellia sinensis var. sinensis HOM05D003131 ORTHO05D003761 2.1e-08 62.4 56 62.5
Duzib268G0498 Durio zibethinus HOM05D003131 ORTHO05D003761 2.1e-08 62.4 66 56.1
Carub.0003s2054 Capsella rubella HOM05D003131 ORTHO05D003761 2.7e-08 62.0 69 52.2
Gorai.013G163100 Gossypium raimondii HOM05D003131 ORTHO05D003761 3.6e-08 61.6 64 54.7
Sp7g25050 Schrenkiella parvula HOM05D003131 ORTHO05D003761 3.6e-08 61.6 65 56.9
Gorai.009G426100 Gossypium raimondii HOM05D003131 ORTHO05D003761 4.7e-08 61.2 64 56.2
TAR627G1168 Trochodendron aralioides HOM05D003131 ORTHO05D003761 6.1e-08 60.8 73 47.9
SMO239G0034 Selaginella moellendorffii HOM05D003131 ORTHO05D003761 1.8e-07 59.3 76 42.1
CSS0044587 Camellia sinensis var. sinensis HOM05D003131 ORTHO05D003761 3.9e-07 58.2 62 56.5
CBR_g22257 Chara braunii HOM05D003131 ORTHO05D003761 3.9e-07 58.2 76 43.4
Pp3c14_18940 Physcomitrium patens HOM05D003131 ORTHO05D003761 5.1e-07 57.8 72 41.7
Mapoly0033s0073 Marchantia polymorpha HOM05D003131 ORTHO05D003761 3.3e-06 55.1 77 40.3
BolC5t32042H Brassica oleracea HOM05D003131 ORTHO05D003761 4.4e-06 54.7 58 50.0


User provided reference genes

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