Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021407.1 Olea europaea HOM05D006520 ORTHO05D008405 1.5e-190 669.5 355 100.0
Dinv22290 Davidia involucrata HOM05D006520 ORTHO05D008405 1.2e-155 553.5 357 82.1
CSS0025953 Camellia sinensis var. sinensis HOM05D006520 ORTHO05D008405 1.5e-155 553.1 351 81.8
Cc05_g13380 Coffea canephora HOM05D006520 ORTHO05D008405 9.9e-155 550.4 356 78.4
Migut.M01795 Erythranthe guttata HOM05D006520 ORTHO05D008405 1.7e-154 549.7 356 80.1
Nitab4.5_0000653g0110 Nicotiana tabacum HOM05D006520 ORTHO05D008405 9.2e-153 543.9 356 79.8
vmacro11755 Vaccinium macrocarpon HOM05D006520 ORTHO05D008405 1.2e-152 543.5 356 79.8
Nitab4.5_0004600g0010 Nicotiana tabacum HOM05D006520 ORTHO05D008405 7.8e-152 540.8 356 78.7
Lj8A167T45 Lonicera japonica HOM05D006520 ORTHO05D008405 3.3e-150 535.4 353 79.0
Solyc12g005200.3 Solanum lycopersicum HOM05D006520 ORTHO05D008405 2.8e-149 532.3 356 78.4
PGSC0003DMG400001100 Solanum tuberosum HOM05D006520 ORTHO05D008405 1.1e-148 530.4 356 78.4
Sopen12g001190 Solanum pennellii HOM05D006520 ORTHO05D008405 8.9e-148 527.3 356 77.8
CAN.G315.8 Capsicum annuum HOM05D006520 ORTHO05D008405 1.2e-147 526.9 351 77.8
QL08p012619 Quercus lobata HOM05D006520 ORTHO05D008405 1.2e-147 526.9 332 82.5
TWI38G0825 Tripterygium wilfordii HOM05D006520 ORTHO05D008405 4.4e-147 525.0 358 77.1
SGA_v2.0_scaffold258G45796 Striga asiatica HOM05D006520 ORTHO05D008405 8.4e-146 520.8 348 78.4
Peaxi162Scf01097g00110 Petunia axillaris HOM05D006520 ORTHO05D008405 1.1e-145 520.4 354 76.8
CANSAT35G1182 Cannabis sativa HOM05D006520 ORTHO05D008405 3.2e-145 518.8 356 77.0
Cfa020400 Carpinus fangiana HOM05D006520 ORTHO05D008405 4.6e-144 515.0 356 77.8
Sc16g0006360 Simmondsia chinensis HOM05D006520 ORTHO05D008405 4.6e-144 515.0 358 77.7
GSVIVG01001984001 Vitis vinifera HOM05D006520 ORTHO05D008405 7.8e-144 514.2 350 78.0
TAR362G1255 Trochodendron aralioides HOM05D006520 ORTHO05D008405 1.0e-143 513.8 366 73.8
Duzib213G0852 Durio zibethinus HOM05D006520 ORTHO05D008405 1.7e-143 513.1 355 76.6
CiPaw.11G185500 Carya illinoinensis HOM05D006520 ORTHO05D008405 3.9e-143 511.9 362 76.2
MD03G1209400 Malus domestica HOM05D006520 ORTHO05D008405 3.9e-143 511.9 333 79.3
Cpa.g.sc1133.1 Carica papaya HOM05D006520 ORTHO05D008405 5.1e-143 511.5 362 76.0
ECA246G0715 Erigeron canadensis HOM05D006520 ORTHO05D008405 5.1e-143 511.5 339 78.8
Eucgr.F00972 Eucalyptus grandis HOM05D006520 ORTHO05D008405 5.1e-143 511.5 363 75.8
DCAR_010030 Daucus carota HOM05D006520 ORTHO05D008405 1.9e-142 509.6 356 73.9
Ciclev10008777m.g Citrus clementina HOM05D006520 ORTHO05D008405 2.5e-142 509.2 356 75.6
HanXRQChr08g0234071 Helianthus annuus HOM05D006520 ORTHO05D008405 4.3e-142 508.4 352 76.1
Nn3g21422 Nelumbo nucifera HOM05D006520 ORTHO05D008405 5.6e-142 508.1 355 74.4
PGR083G2407 Punica granatum HOM05D006520 ORTHO05D008405 5.6e-142 508.1 360 74.4
Aqoxy5G00708 Aquilegia oxysepala HOM05D006520 ORTHO05D008405 7.3e-142 507.7 343 77.0
Gohir.A01G076200 Gossypium hirsutum HOM05D006520 ORTHO05D008405 7.3e-142 507.7 356 74.7
Gorai.002G084200 Gossypium raimondii HOM05D006520 ORTHO05D008405 7.3e-142 507.7 356 74.7
Atru.chr2.3238 Acer truncatum HOM05D006520 ORTHO05D008405 2.8e-141 505.8 356 75.0
Ah.06g182970 Amaranthus hybridus HOM05D006520 ORTHO05D008405 2.8e-141 505.8 358 75.4
COL.COLO4_09604 Corchorus olitorius HOM05D006520 ORTHO05D008405 4.7e-141 505.0 336 77.7
Thecc.07G046500 Theobroma cacao HOM05D006520 ORTHO05D008405 8.1e-141 504.2 332 77.7
AUR62043225 Chenopodium quinoa HOM05D006520 ORTHO05D008405 1.1e-140 503.8 356 75.8
Haze_09634 Corylus avellana HOM05D006520 ORTHO05D008405 2.4e-140 502.7 370 74.6
RcHm_v2.0_Chr5g0037851 Rosa chinensis HOM05D006520 ORTHO05D008405 2.4e-140 502.7 362 73.5
Sed0027741 Sechium edule HOM05D006520 ORTHO05D008405 6.9e-140 501.1 353 74.5
Hund18268 Selenicereus undatus HOM05D006520 ORTHO05D008405 9.0e-140 500.7 360 75.6
FAN16G1768 Fragaria x ananassa HOM05D006520 ORTHO05D008405 1.2e-139 500.4 333 76.9
Potri.011G135600 Populus trichocarpa HOM05D006520 ORTHO05D008405 1.5e-139 500.0 351 75.2
FAN21G1190 Fragaria x ananassa HOM05D006520 ORTHO05D008405 3.4e-139 498.8 333 76.6
FvH4_3g22000 Fragaria vesca HOM05D006520 ORTHO05D008405 5.8e-139 498.0 333 76.6
AL1G58660 Arabidopsis lyrata HOM05D006520 ORTHO05D008405 9.9e-139 497.3 346 74.3
AT1G50940 Arabidopsis thaliana HOM05D006520 ORTHO05D008405 9.9e-139 497.3 350 73.4
Thhalv10011599m.g Eutrema salsugineum HOM05D006520 ORTHO05D008405 1.7e-138 496.5 344 75.9
AUR62020529 Chenopodium quinoa HOM05D006520 ORTHO05D008405 2.9e-138 495.7 356 74.7
Carub.0001s3988 Capsella rubella HOM05D006520 ORTHO05D008405 4.9e-138 495.0 346 74.0
THA.LOC104817880 Tarenaya hassleriana HOM05D006520 ORTHO05D008405 1.1e-137 493.8 332 76.5
Prupe.4G205700 Prunus persica HOM05D006520 ORTHO05D008405 1.4e-137 493.4 340 76.2
CsaV3_3G023150 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.1e-136 489.6 352 73.0
Glyma.06G270300 Glycine max HOM05D006520 ORTHO05D008405 1.3e-135 486.9 360 72.5
Aa31LG10G3340 Aethionema arabicum HOM05D006520 ORTHO05D008405 2.3e-135 486.1 333 74.8
Lsat_1_v5_gn_7_65980 Lactuca sativa HOM05D006520 ORTHO05D008405 2.3e-135 486.1 353 73.4
PSO832G0135 Papaver somniferum HOM05D006520 ORTHO05D008405 3.9e-135 485.3 349 73.4
MELO3C018098.2 Cucumis melo HOM05D006520 ORTHO05D008405 5.1e-135 485.0 352 72.2
PSO210G5695 Papaver somniferum HOM05D006520 ORTHO05D008405 2.5e-134 482.6 349 72.8
Sabra11G0121700 Salix brachista HOM05D006520 ORTHO05D008405 4.3e-134 481.9 372 69.9
Lj3g0004956 Lotus japonicus HOM05D006520 ORTHO05D008405 1.3e-133 480.3 363 71.1
Sabra11G0121400 Salix brachista HOM05D006520 ORTHO05D008405 1.3e-133 480.3 372 69.6
CARHR040980 Cardamine hirsuta HOM05D006520 ORTHO05D008405 3.6e-133 478.8 348 71.8
ATR0706G183 Amborella trichopoda HOM05D006520 ORTHO05D008405 4.8e-133 478.4 356 70.8
A08p03100 Brassica napus HOM05D006520 ORTHO05D008405 4.8e-133 478.4 333 74.5
BcaC01g01246 Brassica carinata HOM05D006520 ORTHO05D008405 1.8e-132 476.5 333 74.2
BolC3t21294H Brassica oleracea HOM05D006520 ORTHO05D008405 1.8e-132 476.5 333 74.2
BraA08t32341Z Brassica rapa HOM05D006520 ORTHO05D008405 1.8e-132 476.5 333 74.2
Lalb_Chr03g0030081 Lupinus albus HOM05D006520 ORTHO05D008405 1.8e-132 476.5 336 73.8
Ca_18859_v3 Cicer arietinum L. HOM05D006520 ORTHO05D008405 5.3e-132 474.9 361 72.0
C03p89710 Brassica napus HOM05D006520 ORTHO05D008405 1.2e-131 473.8 353 70.8
Sp1g37680 Schrenkiella parvula HOM05D006520 ORTHO05D008405 3.4e-131 472.2 353 70.8
BcaB04g17242 Brassica carinata HOM05D006520 ORTHO05D008405 7.6e-131 471.1 354 70.6
ClCG05G014620 Citrullus lanatus HOM05D006520 ORTHO05D008405 8.4e-130 467.6 336 73.2
EL10Ac4g07934 Beta vulgaris HOM05D006520 ORTHO05D008405 1.9e-129 466.5 357 71.7
VMungo1127G1053 Vigna mungo HOM05D006520 ORTHO05D008405 2.4e-129 466.1 360 70.6
Phvul.011G139475 Phaseolus vulgaris HOM05D006520 ORTHO05D008405 3.2e-129 465.7 360 70.8
Medtr4g080790 Medicago truncatula HOM05D006520 ORTHO05D008405 1.2e-128 463.8 360 69.7
arahy.Tifrunner.gnm1.ann1.45MNV2 Arachis hypogaea HOM05D006520 ORTHO05D008405 3.5e-128 462.2 338 72.8
HPP92_026253 Vanilla planifolia HOM05D006520 ORTHO05D008405 1.8e-127 459.9 330 70.9
Os03g0835400 Oryza sativa ssp. japonica HOM05D006520 ORTHO05D008405 1.5e-126 456.8 360 69.4
Psat7g163040 Pisum sativum HOM05D006520 ORTHO05D008405 5.3e-124 448.4 338 71.0
Actinidia09928 Actinidia chinensis HOM05D006520 ORTHO05D008405 7.6e-123 444.5 270 83.3
TPR.G25908 Trifolium pratense HOM05D006520 ORTHO05D008405 4.9e-122 441.8 299 76.3
Manes.15G075200 Manihot esculenta HOM05D006520 ORTHO05D008405 7.1e-121 438.0 270 81.9
Mapoly0055s0094 Marchantia polymorpha HOM05D006520 ORTHO05D008405 1.3e-109 400.6 354 60.2
SHI31861 Sapria himalayana HOM05D006520 ORTHO05D008405 1.2e-107 394.0 357 61.9
Pp3c15_18640 Physcomitrium patens HOM05D006520 ORTHO05D008405 8.5e-106 387.9 332 59.3
Gohir.D01G063700 Gossypium hirsutum HOM05D006520 ORTHO05D008405 1.1e-105 387.5 290 70.7
SMO169G0265 Selaginella moellendorffii HOM05D006520 ORTHO05D008405 1.6e-104 383.6 331 61.0
SalBow6G5624 Salvia bowleyana HOM05D006520 ORTHO05D008405 2.4e-100 369.8 265 75.5
CiPaw.11G185700 Carya illinoinensis HOM05D006520 ORTHO05D008405 4.4e-86 322.4 290 64.1
Zm00001eb063680 Zea mays HOM05D006520 ORTHO05D008405 5.2e-79 298.9 242 64.9
Cre16.g687950 Chlamydomonas reinhardtii HOM05D006520 ORTHO05D008405 1.1e-76 291.2 350 47.4
TAR362G0323 Trochodendron aralioides HOM05D000062 ORTHO05D000043 1.5e-73 280.8 273 56.0
CDE01G0592 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 7.2e-73 278.5 229 69.4
Haze_27296 Corylus avellana HOM05D006520 ORTHO05D008405 7.5e-70 268.5 330 47.0
PRCOL_00001901 Prasinoderma coloniale HOM05D006520 ORTHO05D008405 6.6e-66 255.4 303 48.2
unitig_62.g23270 Utricularia gibba HOM05D006520 ORTHO05D008405 1.9e-65 253.8 182 73.1
CsaV3_3G025180 Cucumis sativus L. HOM05D006520 ORTHO05D008405 7.2e-65 251.9 151 83.4
Cfa027367 Carpinus fangiana HOM05D006520 ORTHO05D008405 3.0e-63 246.5 331 45.9
arahy.Tifrunner.gnm1.ann1.3QT6IB Arachis hypogaea HOM05D006520 ORTHO05D008405 1.2e-59 234.6 132 88.6
CsaV3_3G025190 Cucumis sativus L. HOM05D006520 ORTHO05D008405 2.7e-59 233.4 191 64.4
CsaV3_UNG094710 Cucumis sativus L. HOM05D006520 ORTHO05D008405 3.6e-56 223.0 186 67.7
AagrBONN_evm.TU.Sc2ySwM_228.3593 Anthoceros agrestis HOM05D006520 ORTHO05D008405 8.1e-48 195.3 167 59.9
SEGI_24363 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 8.9e-47 191.8 137 68.6
Glyma.12G134400 Glycine max HOM05D006520 ORTHO05D008405 1.2e-43 181.4 140 67.1
Haze_27029 Corylus avellana HOM05D006520 ORTHO05D008405 7.3e-41 172.2 265 43.0
SEGI_31254 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 4.4e-38 162.9 91 89.0
CsaV3_UNG094720 Cucumis sativus L. HOM05D006520 ORTHO05D008405 8.3e-37 158.7 135 62.2
Actinidia27215 Actinidia chinensis HOM05D006520 ORTHO05D008405 1.2e-27 128.3 138 58.7
Pp3c15_18800 Physcomitrium patens HOM05D006520 ORTHO05D008405 1.5e-25 121.3 133 49.6
unitig_62.g23271 Utricularia gibba HOM05D006520 ORTHO05D008405 7.3e-25 119.0 66 90.9
CDE01G0120 Ceratophyllum demersum HOM05D006520 ORTHO05D008405 2.9e-21 107.1 57 93.0
SEGI_23300 Sequoiadendron giganteum HOM05D006520 ORTHO05D008405 2.3e-18 97.4 89 59.6
EL10Ac4g08085 Beta vulgaris HOM05D006520 ORTHO05D090166 4.9e-13 79.7 43 90.7
MD11G1224100 Malus domestica HOM05D006520 ORTHO05D008405 2.4e-12 77.4 46 80.4


User provided reference genes

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