Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 0.0e+00 1298.5 706 100.0
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 2.4e-160 570.1 843 48.5
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 3.8e-158 562.8 843 48.2
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 7.7e-151 538.5 862 47.9
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 7.2e-149 531.9 803 48.2
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 3.6e-148 529.6 785 48.2
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 5.2e-147 525.8 803 47.9
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 3.7e-145 519.6 867 44.5
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 6.3e-145 518.8 803 47.6
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 2.5e-141 506.9 797 47.6
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 3.0e-139 500.0 829 45.6
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 4.4e-138 496.1 797 47.3
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 7.5e-138 495.4 755 49.7
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 1.3e-137 494.6 856 44.6
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 7.0e-136 488.8 921 40.4
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 1.5e-133 481.1 803 45.2
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 7.2e-133 478.8 793 45.1
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 9.5e-133 478.4 813 45.5
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 3.6e-132 476.5 781 46.9
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 5.7e-130 469.2 854 43.9
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 4.9e-129 466.1 783 45.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 4.9e-129 466.1 786 44.8
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.1e-128 464.9 860 43.1
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 2.4e-128 463.8 869 42.6
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 7.0e-128 462.2 918 39.1
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 7.0e-128 462.2 729 47.2
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 7.8e-127 458.8 728 48.2
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 2.1e-124 450.7 773 45.3
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 8.0e-124 448.7 843 40.7
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 8.0e-124 448.7 735 47.3
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 5.2e-123 446.0 945 38.4
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 6.8e-123 445.7 706 46.9
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.0e-122 444.1 738 47.0
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 5.8e-122 442.6 707 47.4
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 9.8e-122 441.8 839 42.6
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 3.7e-121 439.9 782 44.4
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 5.4e-120 436.0 813 40.2
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 7.0e-120 435.6 928 39.2
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 7.8e-119 432.2 826 42.1
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 3.0e-118 430.3 739 45.5
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 8.6e-118 428.7 794 43.8
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 5.6e-117 426.0 733 44.7
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 2.1e-116 424.1 827 41.1
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 8.1e-116 422.2 824 41.1
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 3.1e-115 420.2 836 41.0
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 4.0e-115 419.9 720 44.7
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 4.0e-115 419.9 803 43.6
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 5.2e-115 419.5 690 45.9
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.2e-114 418.3 700 46.3
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 5.8e-114 416.0 838 40.7
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.3e-113 414.8 898 39.0
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 5.4e-112 409.5 809 39.9
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.6e-111 407.9 874 38.7
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 2.1e-111 407.5 730 44.2
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 5.1e-110 402.9 682 44.0
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 1.5e-109 401.4 746 43.8
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 6.2e-108 396.0 812 39.8
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 8.1e-108 395.6 763 42.7
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.2e-106 391.7 735 42.7
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 1.5e-106 391.3 799 37.7
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 2.0e-106 391.0 733 44.5
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 4.4e-106 389.8 731 42.8
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 7.6e-106 389.0 775 38.5
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 2.2e-105 387.5 786 38.3
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 6.4e-105 386.0 878 38.6
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 4.1e-104 383.3 601 45.1
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 6.6e-102 375.9 763 40.6
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.5e-101 374.8 998 34.6
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 3.3e-101 373.6 714 41.6
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 1.2e-100 371.7 875 38.1
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.2e-95 355.1 681 39.6
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 4.6e-95 353.2 672 41.2
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 6.0e-95 352.8 723 42.0
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 7.8e-95 352.4 786 37.4
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 3.0e-94 350.5 550 45.8
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 2.5e-93 347.4 846 37.9
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 5.6e-93 346.3 466 49.6
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 7.3e-93 345.9 626 42.5
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 9.0e-91 339.0 787 35.5
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 1.2e-90 338.6 784 36.1
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 1.5e-90 338.2 763 37.5
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 4.9e-89 333.2 746 36.7
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 4.2e-88 330.1 727 39.5
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 2.1e-87 327.8 759 36.5
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 4.6e-87 326.6 751 36.8
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 2.8e-84 317.4 847 33.8
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 3.6e-84 317.0 807 38.7
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 6.2e-84 316.2 726 38.6
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 9.0e-83 312.4 730 38.4
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 2.6e-82 310.8 695 38.3
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 3.9e-78 297.0 652 40.0
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 4.5e-74 283.5 696 36.9
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 1.9e-72 278.1 426 46.5
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 7.1e-72 276.2 493 42.2
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 2.8e-68 264.2 839 31.9
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 1.3e-57 228.8 560 40.0
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 3.7e-52 210.7 330 44.5
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.4e-51 208.0 656 31.4
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 2.4e-51 208.0 656 31.4
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.6e-42 178.7 872 27.8
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 4.0e-38 164.1 154 61.7
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 1.4e-35 155.6 323 38.7
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 5.5e-32 143.7 274 38.3
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 9.8e-29 132.9 528 31.6
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 5.4e-27 127.1 129 55.8
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 7.0e-27 126.7 295 38.3
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 9.5e-24 116.3 250 38.4
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 4.7e-23 114.0 171 40.9
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 2.6e-21 108.2 126 64.3
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 1.1e-19 102.8 379 31.4
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 3.5e-18 97.8 138 45.7
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.9e-17 94.7 338 29.3
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 2.5e-16 91.7 147 44.2
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 8.9e-14 83.2 120 39.2
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.9e-12 78.2 217 35.9
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 3.3e-08 64.7 112 46.4
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 2.1e-07 62.0 56 53.6
Glyma.10G258901 Glycine max HOM05D006481 ORTHO05D008160 1.0e-06 59.7 105 39.0
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 1.0e-06 59.7 64 59.4
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 1.8e-06 58.9 129 35.7


User provided reference genes

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