Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 1.6e-177 625.9 306 100.0
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 3.2e-77 292.7 288 53.5
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 4.2e-77 292.4 267 54.3
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 6.7e-75 285.0 287 51.6
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 2.8e-73 279.6 299 53.8
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 2.8e-73 279.6 299 54.2
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 4.8e-65 252.3 291 47.4
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 3.1e-64 249.6 311 44.4
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 5.3e-64 248.8 285 48.1
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 6.9e-64 248.4 279 47.7
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 9.0e-64 248.1 288 46.2
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 1.5e-63 247.3 325 43.1
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.5e-63 247.3 288 45.8
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 6.5e-62 241.9 297 45.1
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 8.4e-62 241.5 289 46.4
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 1.9e-61 240.4 291 44.7
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 3.2e-61 239.6 273 47.3
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 4.2e-61 239.2 291 45.4
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 1.6e-60 237.3 294 45.6
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 4.6e-60 235.7 289 45.7
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 7.9e-60 235.0 289 45.3
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.3e-59 234.2 284 45.4
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 2.3e-59 233.4 292 43.2
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 3.9e-59 232.6 269 45.4
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 6.7e-59 231.9 296 43.2
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 8.7e-59 231.5 290 43.8
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.9e-58 230.3 273 45.1
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 5.7e-58 228.8 294 45.2
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 5.7e-58 228.8 287 43.6
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 2.2e-57 226.9 291 43.6
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 2.8e-57 226.5 292 44.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 6.3e-57 225.3 294 44.2
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 2.4e-56 223.4 287 44.3
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 1.5e-55 220.7 286 43.0
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 1.0e-54 218.0 244 50.4
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 2.9e-54 216.5 305 42.3
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 8.5e-54 214.9 245 49.4
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.1e-53 214.5 289 41.5
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.6e-52 210.7 289 41.2
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 4.6e-52 209.1 280 40.7
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 1.4e-51 207.6 295 41.0
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.8e-51 207.2 290 40.7
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 6.7e-51 205.3 315 39.7
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 3.3e-50 203.0 289 39.4
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 1.7e-49 200.7 288 40.6
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 3.7e-49 199.5 290 39.0
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 3.7e-49 199.5 321 38.6
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 3.1e-48 196.4 296 41.2
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 6.9e-48 195.3 282 39.4
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 2.6e-47 193.4 295 39.0
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 7.7e-47 191.8 272 39.3
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 1.0e-46 191.4 371 33.2
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.9e-46 189.9 285 40.0
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 5.5e-45 185.7 296 37.2
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 6.1e-44 182.2 294 36.4
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 1.4e-43 181.0 203 46.3
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 2.3e-43 180.3 294 41.8
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 3.3e-42 176.4 297 37.0
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 8.2e-41 171.8 295 37.6
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 8.2e-41 171.8 295 37.6
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 1.4e-40 171.0 294 34.0
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 2.4e-40 170.2 287 35.9
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 3.1e-40 169.9 295 37.6
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 3.1e-40 169.9 300 37.0
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 4.1e-40 169.5 297 36.0
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 9.1e-40 168.3 291 33.0
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 4.5e-39 166.0 229 40.6
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 5.9e-39 165.6 297 35.4
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 1.1e-37 161.4 170 46.5
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.5e-37 161.0 232 40.1
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 6.7e-35 152.1 290 33.8
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 1.1e-34 151.4 268 38.8
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 3.3e-34 149.8 211 38.9
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 3.3e-34 149.8 250 37.6
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 9.7e-34 148.3 203 39.9
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 2.8e-33 146.7 163 47.9
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 2.2e-30 137.1 173 40.5
SGA_v2.0_scaffold214G42289 Striga asiatica HOM05D003067 ORTHO05D009378 2.6e-26 123.6 241 35.3
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 7.5e-26 122.1 194 38.1
SGA_v2.0_scaffold113G31772 Striga asiatica HOM05D003067 ORTHO05D009378 8.3e-25 118.6 190 41.6
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 2.1e-20 104.0 229 33.2
Nitab4.5_0000525g0300 Nicotiana tabacum HOM05D003067 ORTHO05D009378 2.0e-18 97.4 180 38.3
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 8.3e-17 92.0 92 46.7
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 7.2e-13 79.0 146 32.9
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 2.1e-12 77.4 59 61.0
Nitab4.5_0001478g0160 Nicotiana tabacum HOM05D003067 ORTHO05D009378 6.8e-11 72.4 180 29.4
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 4.1e-08 63.2 114 31.6
Mapoly0029s0107 Marchantia polymorpha HOM05D001297 ORTHO05D001135 7.8e-07 58.9 290 24.5
AL6G46700 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 8.6e-06 55.5 119 30.3


User provided reference genes

Program Settings