Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 2.4e-50 201.8 101 100.0
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 1.2e-41 172.9 99 87.9
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 5.3e-37 157.5 99 75.8
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 1.5e-36 156.0 97 78.4
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 1.5e-36 156.0 99 73.7
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 2.6e-36 155.2 99 73.7
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 5.9e-36 154.1 100 78.0
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.0e-35 153.3 99 73.7
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 1.0e-35 153.3 99 72.7
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 1.7e-35 152.5 99 76.8
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 2.9e-35 151.8 99 77.8
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 2.9e-35 151.8 100 77.0
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 6.5e-35 150.6 99 74.7
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 1.1e-34 149.8 99 75.8
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 1.4e-34 149.4 99 71.7
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 1.9e-34 149.1 100 76.0
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.2e-33 146.4 101 73.3
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.2e-33 146.4 101 73.3
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 2.7e-33 145.2 96 71.9
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 2.7e-33 145.2 99 73.7
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 4.6e-33 144.4 99 72.7
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 4.6e-33 144.4 98 71.4
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 6.1e-33 144.1 99 74.7
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 1.3e-32 142.9 99 72.7
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.8e-32 142.5 101 70.3
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 2.3e-32 142.1 99 72.7
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.3e-32 142.1 100 72.0
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 2.3e-32 142.1 99 71.7
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 2.3e-32 142.1 99 70.7
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 3.9e-32 141.4 99 72.7
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 5.1e-32 141.0 99 73.7
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-31 139.4 99 70.7
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.5e-31 139.4 99 69.7
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 1.9e-31 139.0 102 70.6
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 1.9e-31 139.0 100 68.0
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 1.9e-31 139.0 100 70.0
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.3e-31 138.3 95 74.7
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 3.3e-31 138.3 99 72.7
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 3.3e-31 138.3 99 66.7
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 4.3e-31 137.9 99 70.7
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 4.3e-31 137.9 99 71.7
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 5.7e-31 137.5 102 70.6
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 7.4e-31 137.1 100 66.0
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 1.3e-30 136.3 98 72.4
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.3e-30 136.3 99 71.7
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.3e-30 136.3 99 69.7
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 1.6e-30 136.0 95 70.5
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 1.6e-30 136.0 101 69.3
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 2.2e-30 135.6 100 67.0
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 2.8e-30 135.2 99 69.7
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 2.8e-30 135.2 102 72.5
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 2.8e-30 135.2 101 69.3
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 4.8e-30 134.4 96 71.9
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 6.3e-30 134.0 99 69.7
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.1e-29 133.3 101 71.3
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.4e-29 132.9 99 68.7
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 1.8e-29 132.5 99 67.7
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.4e-29 132.1 100 69.0
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 2.4e-29 132.1 100 69.0
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 3.1e-29 131.7 92 72.8
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 4.1e-29 131.3 101 64.4
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 4.1e-29 131.3 103 68.0
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 5.3e-29 131.0 99 66.7
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 5.3e-29 131.0 100 67.0
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 6.9e-29 130.6 99 66.7
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 6.9e-29 130.6 99 68.7
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.2e-28 129.8 100 66.0
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 1.5e-28 129.4 101 66.3
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 1.5e-28 129.4 99 66.7
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 2.0e-28 129.0 100 67.0
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 2.6e-28 128.6 99 65.7
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 5.9e-28 127.5 101 69.3
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 5.9e-28 127.5 100 65.0
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.0e-27 126.7 101 65.3
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 1.0e-27 126.7 100 64.0
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 1.0e-27 126.7 99 66.7
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.0e-27 126.7 99 66.7
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.0e-27 126.7 99 66.7
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.0e-27 126.7 99 66.7
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 1.0e-27 126.7 98 67.3
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 1.3e-27 126.3 101 64.4
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.3e-27 126.3 96 63.5
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 1.3e-27 126.3 99 66.7
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 1.7e-27 125.9 99 66.7
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 2.2e-27 125.6 97 66.0
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 2.9e-27 125.2 100 64.0
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 2.9e-27 125.2 97 68.0
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 6.5e-27 124.0 101 65.3
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 8.5e-27 123.6 99 63.6
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 8.5e-27 123.6 99 63.6
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.1e-26 123.2 99 63.6
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 1.4e-26 122.9 99 61.6
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 1.9e-26 122.5 111 60.4
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 1.9e-26 122.5 101 66.3
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 3.2e-26 121.7 98 64.3
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 3.2e-26 121.7 99 64.6
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 4.2e-26 121.3 103 67.0
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 4.2e-26 121.3 101 66.3
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 5.5e-26 120.9 98 68.4
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 5.5e-26 120.9 100 60.0
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 9.4e-26 120.2 101 65.3
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 9.4e-26 120.2 99 62.6
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 1.2e-25 119.8 101 65.3
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 2.1e-25 119.0 98 66.3
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 2.1e-25 119.0 94 64.9
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 2.7e-25 118.6 98 60.2
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 4.6e-25 117.9 101 62.4
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 4.6e-25 117.9 101 62.4
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 4.6e-25 117.9 101 64.4
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 7.9e-25 117.1 101 62.4
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 1.0e-24 116.7 101 61.4
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 1.0e-24 116.7 101 61.4
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 1.0e-24 116.7 101 61.4
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 1.4e-24 116.3 101 63.4
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 1.4e-24 116.3 101 63.4
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 1.8e-24 115.9 101 61.4
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 2.3e-24 115.5 101 62.4
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 3.0e-24 115.2 99 57.6
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 3.9e-24 114.8 101 61.4
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 6.7e-24 114.0 101 57.4
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 8.8e-24 113.6 99 61.6
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 1.1e-23 113.2 101 62.4
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.5e-23 112.8 98 61.2
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 2.0e-23 112.5 101 60.4
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 3.3e-23 111.7 101 60.4
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 4.3e-23 111.3 94 62.8
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 1.7e-22 109.4 94 59.6
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 4.8e-22 107.8 101 63.4
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 1.1e-21 106.7 98 60.2
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 1.1e-21 106.7 98 60.2
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 6.9e-21 104.0 102 59.8
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 9.1e-21 103.6 95 61.1
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 4.5e-20 101.3 64 75.0
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 5.0e-19 97.8 99 53.5
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 6.5e-19 97.4 89 55.1
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 3.2e-18 95.1 101 52.5
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 4.2e-18 94.7 76 60.5
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 7.2e-18 94.0 64 73.4
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 3.6e-17 91.7 96 51.0
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 8.8e-16 87.0 47 85.1
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 1.5e-15 86.3 91 51.6
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 1.7e-14 82.8 73 60.3
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 2.2e-14 82.4 97 48.5
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 3.7e-14 81.6 85 52.9
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 4.8e-14 81.3 42 90.5
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 2.4e-13 79.0 47 78.7
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 4.1e-13 78.2 42 85.7
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 2.6e-12 75.5 44 84.1
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 2.9e-11 72.0 46 73.9
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 2.1e-09 65.9 50 58.0
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 8.8e-08 60.5 32 81.2
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 3.3e-07 58.5 72 45.8
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 5.7e-07 57.8 30 86.7
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 5.7e-07 57.8 30 86.7
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 4.8e-06 54.7 30 80.0


User provided reference genes

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