Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 6.8e-51 203.8 106 100.0
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 2.0e-34 149.1 107 73.8
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 3.7e-33 144.8 106 71.7
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 2.0e-31 139.0 107 71.0
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 3.5e-31 138.3 105 68.6
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 2.3e-30 135.6 103 68.0
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 2.3e-30 135.6 107 70.1
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 3.0e-30 135.2 106 66.0
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 3.0e-30 135.2 106 67.0
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 5.0e-30 134.4 91 75.8
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 2.5e-29 132.1 103 68.0
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 2.5e-29 132.1 103 68.0
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 2.5e-29 132.1 107 69.2
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 2.5e-29 132.1 105 66.7
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 2.5e-29 132.1 106 64.2
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 4.3e-29 131.3 103 67.0
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 4.3e-29 131.3 105 66.7
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 4.3e-29 131.3 106 66.0
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 5.6e-29 131.0 103 67.0
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 5.6e-29 131.0 107 64.5
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 7.3e-29 130.6 105 63.8
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 9.5e-29 130.2 105 66.7
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 1.2e-28 129.8 96 69.8
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 1.2e-28 129.8 99 69.7
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 1.2e-28 129.8 106 67.0
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.2e-28 129.8 106 65.1
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 1.6e-28 129.4 104 68.3
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 1.6e-28 129.4 103 65.0
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 1.6e-28 129.4 108 67.6
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 2.1e-28 129.0 107 67.3
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 2.1e-28 129.0 105 61.9
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 2.1e-28 129.0 90 72.2
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.6e-28 128.3 106 63.2
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 4.7e-28 127.9 89 69.7
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 6.2e-28 127.5 106 63.2
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 6.2e-28 127.5 106 63.2
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 6.2e-28 127.5 103 64.1
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 8.0e-28 127.1 105 64.8
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 8.0e-28 127.1 105 64.8
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 8.0e-28 127.1 106 63.2
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 1.0e-27 126.7 98 67.3
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 1.4e-27 126.3 107 61.7
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 1.4e-27 126.3 106 62.3
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.4e-27 126.3 106 62.3
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.4e-27 126.3 105 63.8
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 1.4e-27 126.3 105 63.8
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 1.4e-27 126.3 105 63.8
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 1.4e-27 126.3 102 67.6
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 1.8e-27 125.9 106 66.0
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 1.8e-27 125.9 87 71.3
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 1.8e-27 125.9 99 68.7
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 1.8e-27 125.9 105 62.9
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 1.8e-27 125.9 105 62.9
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 2.3e-27 125.6 98 67.3
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 2.3e-27 125.6 105 61.9
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 2.3e-27 125.6 106 64.2
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 2.3e-27 125.6 107 61.7
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 2.3e-27 125.6 106 61.3
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 4.0e-27 124.8 98 66.3
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 4.0e-27 124.8 103 66.0
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 4.0e-27 124.8 98 66.3
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 4.0e-27 124.8 108 67.6
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 5.2e-27 124.4 98 67.3
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 5.2e-27 124.4 108 64.8
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 5.2e-27 124.4 106 65.1
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 6.8e-27 124.0 98 65.3
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 6.8e-27 124.0 98 65.3
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 6.8e-27 124.0 98 65.3
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 6.8e-27 124.0 106 63.2
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 6.8e-27 124.0 107 65.4
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 6.8e-27 124.0 108 63.9
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 8.9e-27 123.6 89 70.8
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 8.9e-27 123.6 102 64.7
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 8.9e-27 123.6 105 62.9
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 8.9e-27 123.6 106 60.4
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 1.2e-26 123.2 88 70.5
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 1.2e-26 123.2 98 65.3
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 1.2e-26 123.2 88 70.5
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.5e-26 122.9 106 62.3
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 2.0e-26 122.5 99 66.7
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.0e-26 122.5 105 67.6
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 4.4e-26 121.3 98 63.3
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 4.4e-26 121.3 88 69.3
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 4.4e-26 121.3 88 69.3
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 4.4e-26 121.3 107 62.6
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 4.4e-26 121.3 106 62.3
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 4.4e-26 121.3 105 66.7
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 4.4e-26 121.3 98 64.3
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 5.8e-26 120.9 87 67.8
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 5.8e-26 120.9 87 69.0
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 5.8e-26 120.9 106 60.4
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 9.8e-26 120.2 93 71.0
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 1.3e-25 119.8 98 62.2
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 1.3e-25 119.8 88 69.3
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 1.7e-25 119.4 107 62.6
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 1.7e-25 119.4 105 62.9
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 1.7e-25 119.4 98 63.3
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 1.7e-25 119.4 104 62.5
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 1.7e-25 119.4 119 56.3
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 1.7e-25 119.4 108 66.7
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 1.7e-25 119.4 102 62.7
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 2.2e-25 119.0 88 68.2
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 2.2e-25 119.0 125 55.2
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 2.9e-25 118.6 98 60.2
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 3.7e-25 118.2 106 64.2
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 6.4e-25 117.5 103 63.1
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 6.4e-25 117.5 103 63.1
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 1.1e-24 116.7 92 66.3
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 1.9e-24 115.9 93 67.7
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 2.4e-24 115.5 84 65.5
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 4.1e-24 114.8 88 65.9
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 4.1e-24 114.8 93 64.5
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 2.7e-23 112.1 84 67.9
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 3.5e-23 111.7 93 60.2
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 4.6e-23 111.3 87 62.1
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 4.6e-23 111.3 103 59.2
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 6.0e-23 110.9 106 57.5
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 6.0e-23 110.9 97 62.9
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.3e-22 109.8 127 52.0
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 3.9e-22 108.2 100 61.0
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 1.5e-21 106.3 88 64.8
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 2.5e-21 105.5 92 60.9
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 5.6e-21 104.4 93 59.1
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 1.2e-20 103.2 109 56.0
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 1.4e-19 99.8 107 54.2
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.5e-18 96.3 89 57.3
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 1.3e-17 93.2 108 50.9
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.7e-17 92.8 105 51.4
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 2.2e-17 92.4 108 51.9
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.9e-16 89.4 75 68.0
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 2.4e-16 89.0 74 64.9
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 3.5e-15 85.1 74 62.2
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 3.5e-15 85.1 71 64.8
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 2.3e-14 82.4 65 69.2
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.5e-13 79.0 74 60.8
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 4.3e-13 78.2 101 43.6
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 5.6e-13 77.8 75 61.3
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 1.6e-12 76.3 84 51.2
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 8.1e-12 73.9 74 56.8
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.4e-11 73.2 52 73.1
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 1.8e-11 72.8 85 54.1
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 3.1e-11 72.0 71 59.2
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 1.3e-09 66.6 102 41.2
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 3.2e-08 62.0 70 58.6
CBR_g30301 Chara braunii HOM05D005271 ORTHO05D006072 7.1e-08 60.8 70 47.1
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 1.7e-06 56.2 83 45.8
Cfa013238 Carpinus fangiana HOM05D005271 ORTHO05D006072 6.6e-06 54.3 37 67.6


User provided reference genes

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