Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021128.1 Olea europaea HOM05D004212 ORTHO05D005128 1.5e-311 1072.0 545 100.0
Oeu001834.1 Olea europaea HOM05D004212 ORTHO05D005128 5.1e-118 429.1 391 61.1
MSTRG.10244 Avicennia marina HOM05D004212 ORTHO05D005128 8.8e-86 322.0 393 48.9
Migut.J00264 Erythranthe guttata HOM05D004212 ORTHO05D005128 5.1e-78 296.2 393 44.8
Nitab4.5_0008116g0030 Nicotiana tabacum HOM05D004212 ORTHO05D005128 2.0e-77 294.3 392 43.1
Peaxi162Scf00975g00132 Petunia axillaris HOM05D004212 ORTHO05D005128 3.3e-77 293.5 393 43.8
Sopen09g006170 Solanum pennellii HOM05D004212 ORTHO05D005128 5.7e-77 292.7 396 44.2
Thecc.05G029300 Theobroma cacao HOM05D004212 ORTHO05D005128 9.7e-77 292.0 395 43.8
Solyc09g011450.4 Solanum lycopersicum HOM05D004212 ORTHO05D005128 4.8e-76 289.7 396 43.9
SalBow7G2619 Salvia bowleyana HOM05D004212 ORTHO05D005128 6.3e-76 289.3 392 43.6
unitig_62.g23469 Utricularia gibba HOM05D004212 ORTHO05D005128 3.5e-74 283.5 391 44.0
Gohir.D01G209900 Gossypium hirsutum HOM05D004212 ORTHO05D005128 2.5e-72 277.3 393 41.2
Gorai.002G255500 Gossypium raimondii HOM05D004212 ORTHO05D005128 2.5e-72 277.3 393 41.2
Cc06_g02090 Coffea canephora HOM05D004212 ORTHO05D005128 4.2e-72 276.6 398 44.2
Gohir.A01G221000 Gossypium hirsutum HOM05D004212 ORTHO05D005128 9.4e-72 275.4 393 41.5
CiPaw.09G201200 Carya illinoinensis HOM05D004212 ORTHO05D005128 2.1e-71 274.2 392 42.9
GSVIVG01034068001 Vitis vinifera HOM05D004212 ORTHO05D005128 2.1e-71 274.2 391 42.5
Haze_20882 Corylus avellana HOM05D004212 ORTHO05D005128 1.0e-70 271.9 548 35.8
PGSC0003DMG400024265 Solanum tuberosum HOM05D004212 ORTHO05D005128 1.8e-70 271.2 411 43.3
Haze_20891 Corylus avellana HOM05D004212 ORTHO05D005128 3.0e-70 270.4 548 35.6
Manes.09G098300 Manihot esculenta HOM05D004212 ORTHO05D005128 7.4e-69 265.8 394 41.6
TAR633G1640 Trochodendron aralioides HOM05D004212 ORTHO05D005128 1.3e-68 265.0 394 41.9
Cfa010180 Carpinus fangiana HOM05D004212 ORTHO05D005128 3.1e-67 260.4 392 42.6
CsaV3_4G025590 Cucumis sativus L. HOM05D004212 ORTHO05D005128 2.6e-66 257.3 554 34.3
ClCG04G007620 Citrullus lanatus HOM05D004212 ORTHO05D005128 5.9e-66 256.1 550 34.2
COL.COLO4_14697 Corchorus olitorius HOM05D004212 ORTHO05D005128 5.9e-66 256.1 395 40.3
Lalb_Chr03g0042691 Lupinus albus HOM05D004212 ORTHO05D005128 1.7e-65 254.6 395 39.7
CANSAT35G0035 Cannabis sativa HOM05D004212 ORTHO05D005128 2.2e-65 254.2 393 42.5
Psat3g133560 Pisum sativum HOM05D004212 ORTHO05D005128 3.8e-65 253.4 393 40.5
MELO3C003185.2 Cucumis melo HOM05D004212 ORTHO05D005128 5.0e-65 253.1 554 33.9
Hund00715 Selenicereus undatus HOM05D004212 ORTHO05D005128 5.0e-65 253.1 390 41.5
AL5G34970 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 6.5e-65 252.7 396 40.7
THA.LOC104806541 Tarenaya hassleriana HOM05D004212 ORTHO05D005128 6.5e-65 252.7 393 41.2
Lalb_Chr19g0125041 Lupinus albus HOM05D004212 ORTHO05D005128 8.5e-65 252.3 400 40.2
Aa31LG10G8930 Aethionema arabicum HOM05D004212 ORTHO05D005128 1.9e-64 251.1 395 41.0
Ciclev10021036m.g Citrus clementina HOM05D004212 ORTHO05D005128 1.9e-64 251.1 393 41.7
arahy.Tifrunner.gnm1.ann1.PUF7HK Arachis hypogaea HOM05D004212 ORTHO05D005128 2.5e-64 250.8 399 43.4
AT3G53970 Arabidopsis thaliana HOM05D004212 ORTHO05D005128 5.5e-64 249.6 396 40.4
Ca_07566_v3 Cicer arietinum L. HOM05D004212 ORTHO05D005128 7.2e-64 249.2 393 41.2
Lsat_1_v5_gn_8_84101 Lactuca sativa HOM05D004212 ORTHO05D005128 7.2e-64 249.2 397 40.3
Carub.0005s2056 Capsella rubella HOM05D004212 ORTHO05D005128 1.2e-63 248.4 398 39.9
arahy.Tifrunner.gnm1.ann1.MS11WY Arachis hypogaea HOM05D004212 ORTHO05D005128 2.7e-63 247.3 399 43.1
Sed0021611 Sechium edule HOM05D004212 ORTHO05D005128 2.7e-63 247.3 395 40.8
TWI53G1663 Tripterygium wilfordii HOM05D004212 ORTHO05D005128 2.7e-63 247.3 405 41.2
CARHR163870 Cardamine hirsuta HOM05D004212 ORTHO05D005128 1.8e-62 244.6 398 40.7
Eucgr.K03043 Eucalyptus grandis HOM05D004212 ORTHO05D005128 2.3e-62 244.2 388 40.2
arahy.Tifrunner.gnm1.ann1.SP0BHI Arachis hypogaea HOM05D004212 ORTHO05D005128 3.0e-62 243.8 394 43.1
TPR.G34923 Trifolium pratense HOM05D004212 ORTHO05D005128 4.0e-62 243.4 399 39.8
FAN12G3486 Fragaria x ananassa HOM05D004212 ORTHO05D005128 6.7e-62 242.7 398 40.7
Atru.chr8.2089 Acer truncatum HOM05D004212 ORTHO05D005128 8.8e-62 242.3 549 33.3
EL10Ac3g05638 Beta vulgaris HOM05D004212 ORTHO05D005128 1.5e-61 241.5 396 40.2
Medtr7g065120 Medicago truncatula HOM05D004212 ORTHO05D005128 1.5e-61 241.5 405 40.7
Phvul.006G149300 Phaseolus vulgaris HOM05D004212 ORTHO05D005128 1.5e-61 241.5 392 39.8
FAN12G2442 Fragaria x ananassa HOM05D004212 ORTHO05D005128 2.0e-61 241.1 398 40.5
HanXRQChr04g0124481 Helianthus annuus HOM05D004212 ORTHO05D005128 5.7e-61 239.6 396 38.6
Prupe.6G264400 Prunus persica HOM05D004212 ORTHO05D005128 7.5e-61 239.2 549 34.4
Sc22g0004390 Simmondsia chinensis HOM05D004212 ORTHO05D005128 2.2e-60 237.7 392 40.8
MD04G1138800 Malus domestica HOM05D004212 ORTHO05D005128 2.8e-60 237.3 551 33.6
TWI74G0733 Tripterygium wilfordii HOM05D004212 ORTHO05D005128 2.8e-60 237.3 403 40.2
FAN07G0792 Fragaria x ananassa HOM05D004212 ORTHO05D005128 3.7e-60 236.9 396 39.9
AUR62021188 Chenopodium quinoa HOM05D004212 ORTHO05D005128 1.4e-59 235.0 392 39.0
Ciclev10012365m.g Citrus clementina HOM05D004212 ORTHO05D005128 1.4e-59 235.0 393 40.7
ECA236G3305 Erigeron canadensis HOM05D004212 ORTHO05D005128 4.1e-59 233.4 395 38.7
DCAR_028811 Daucus carota HOM05D004212 ORTHO05D005128 7.0e-59 232.6 398 38.9
RcHm_v2.0_Chr4g0406841 Rosa chinensis HOM05D004212 ORTHO05D005128 7.0e-59 232.6 392 40.3
SGA_v2.0_scaffold673G53429 Striga asiatica HOM05D004212 ORTHO05D005128 7.0e-59 232.6 345 42.3
vmacro20195 Vaccinium macrocarpon HOM05D004212 ORTHO05D005128 7.0e-59 232.6 395 39.5
Glyma.15G165200 Glycine max HOM05D004212 ORTHO05D005128 9.1e-59 232.3 392 39.3
Hma1.2p1_0671F.1_g200560 Hydrangea macrophylla HOM05D004212 ORTHO05D005128 9.1e-59 232.3 396 40.9
Glyma.09G059100 Glycine max HOM05D004212 ORTHO05D005128 2.0e-58 231.1 395 38.2
MD12G1154600 Malus domestica HOM05D004212 ORTHO05D005128 2.0e-58 231.1 547 32.7
Dinv35542 Davidia involucrata HOM05D004212 ORTHO05D005128 2.7e-58 230.7 366 40.7
Potri.016G103800 Populus trichocarpa HOM05D004212 ORTHO05D005128 5.9e-58 229.6 392 39.5
Lj1g0008590 Lotus japonicus HOM05D004212 ORTHO05D005128 7.7e-58 229.2 401 38.2
VMungo0540G1009 Vigna mungo HOM05D004212 ORTHO05D005128 1.0e-57 228.8 392 39.5
AUR62015980 Chenopodium quinoa HOM05D004212 ORTHO05D005128 1.7e-57 228.0 380 39.5
arahy.Tifrunner.gnm1.ann1.59HWIF Arachis hypogaea HOM05D004212 ORTHO05D005128 2.2e-57 227.6 401 37.2
Sabra16G0103700 Salix brachista HOM05D004212 ORTHO05D005128 2.2e-57 227.6 393 39.7
CSS0007767 Camellia sinensis var. sinensis HOM05D004212 ORTHO05D005128 2.9e-57 227.3 393 37.9
PGR004G1844 Punica granatum HOM05D004212 ORTHO05D005128 3.8e-57 226.9 403 37.2
arahy.Tifrunner.gnm1.ann1.77ZQ01 Arachis hypogaea HOM05D004212 ORTHO05D005128 2.5e-56 224.2 401 37.4
Rhsim05G0199700 Rhododendron simsii HOM05D004212 ORTHO05D005128 3.6e-55 220.3 394 39.1
Duzib093G0395 Durio zibethinus HOM05D004212 ORTHO05D005128 4.7e-55 219.9 389 36.5
Nn2g11289 Nelumbo nucifera HOM05D004212 ORTHO05D005128 6.8e-54 216.1 394 37.1
QL07p028338 Quercus lobata HOM05D004212 ORTHO05D005128 2.6e-53 214.2 408 37.0
Thhalv10010577m.g Eutrema salsugineum HOM05D004212 ORTHO05D005128 2.2e-52 211.1 401 38.4
CAN.G697.3 Capsicum annuum HOM05D004212 ORTHO05D005128 3.8e-49 200.3 185 56.8
HPP92_005893 Vanilla planifolia HOM05D004212 ORTHO05D005128 1.5e-48 198.4 401 35.4
Lj2C86T9 Lonicera japonica HOM05D004212 ORTHO05D005128 1.9e-48 198.0 412 36.4
BcaB02g07758 Brassica carinata HOM05D004212 ORTHO05D005128 3.0e-46 190.7 395 35.9
BraA07t29869Z Brassica rapa HOM05D004212 ORTHO05D005128 1.7e-44 184.9 397 36.0
A07p21880 Brassica napus HOM05D004212 ORTHO05D005128 2.8e-44 184.1 397 36.0
Sp5g08430 Schrenkiella parvula HOM05D004212 ORTHO05D005128 2.4e-43 181.0 398 35.4
BolC6t37364H Brassica oleracea HOM05D004212 ORTHO05D005128 1.2e-42 178.7 397 35.5
PSO384G5122 Papaver somniferum HOM05D004212 ORTHO05D005128 2.0e-42 177.9 394 34.5
CDE02G2360 Ceratophyllum demersum HOM05D004212 ORTHO05D005128 2.7e-42 177.6 403 34.0
BcaC08g44655 Brassica carinata HOM05D004212 ORTHO05D005128 4.5e-42 176.8 397 35.3
C06p21750 Brassica napus HOM05D004212 ORTHO05D005128 4.5e-42 176.8 397 35.3
PSO339G0401 Papaver somniferum HOM05D004212 ORTHO05D005128 4.5e-42 176.8 394 34.5
FAN14G3630 Fragaria x ananassa HOM05D004212 ORTHO05D005128 1.7e-41 174.9 155 55.5
FAN05G0076 Fragaria x ananassa HOM05D004212 ORTHO05D005128 2.3e-41 174.5 195 48.2
Actinidia29168 Actinidia chinensis HOM05D004212 ORTHO05D005128 1.5e-40 171.8 195 51.3
ATR1134G026 Amborella trichopoda HOM05D004212 ORTHO05D005128 2.5e-40 171.0 396 34.3
RcHm_v2.0_Chr3g0464661 Rosa chinensis HOM05D004212 ORTHO05D005128 2.5e-40 171.0 187 48.1
FvH4_4g10740 Fragaria vesca HOM05D004212 ORTHO05D005128 3.3e-40 170.6 342 36.0
FAN09G1025 Fragaria x ananassa HOM05D004212 ORTHO05D005128 5.6e-40 169.9 144 56.9
FvH4_6g12740 Fragaria vesca HOM05D004212 ORTHO05D005128 9.5e-40 169.1 417 32.6
Zm00001eb323600 Zea mays HOM05D004212 ORTHO05D005128 2.1e-39 167.9 394 32.0
Os07g0548900 Oryza sativa ssp. japonica HOM05D004212 ORTHO05D005128 2.6e-37 161.0 395 31.1
Aqoxy4G03223 Aquilegia oxysepala HOM05D004212 ORTHO05D005128 2.9e-36 157.5 396 30.6
RcHm_v2.0_Chr4g0419261 Rosa chinensis HOM05D004212 ORTHO05D005128 4.9e-36 156.8 168 53.0
Duzib106G0220 Durio zibethinus HOM05D004212 ORTHO05D005128 1.4e-35 155.2 236 41.9
Aqoxy7G01126 Aquilegia oxysepala HOM05D004212 ORTHO05D005128 1.9e-35 154.8 396 30.1
Carub.0003s2694 Capsella rubella HOM05D004212 ORTHO05D005128 2.4e-35 154.5 177 49.2
Hma1.2p1_0097F.1_g048000 Hydrangea macrophylla HOM05D004212 ORTHO05D005128 2.0e-34 151.4 115 66.1
Mapoly0013s0005 Marchantia polymorpha HOM05D004212 ORTHO05D005128 4.6e-34 150.2 401 30.2
Prupe.6G304800 Prunus persica HOM05D004212 ORTHO05D005128 4.6e-34 150.2 147 54.4
Lj3C960G5 Lonicera japonica HOM05D004212 ORTHO05D005128 5.0e-33 146.7 134 55.2
arahy.Tifrunner.gnm1.ann1.MGHR3Z Arachis hypogaea HOM05D004212 ORTHO05D005128 8.6e-33 146.0 115 61.7
CAN.G697.2 Capsicum annuum HOM05D004212 ORTHO05D005128 8.6e-33 146.0 110 65.5
AL3G43180 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 1.1e-32 145.6 191 46.1
AT1G48530 Arabidopsis thaliana HOM05D004212 ORTHO05D005128 3.6e-31 140.6 169 47.9
BcaB01g00227 Brassica carinata HOM05D004212 ORTHO05D005128 8.0e-31 139.4 174 49.4
Lj4g0027540 Lotus japonicus HOM05D004212 ORTHO05D005128 1.8e-30 138.3 161 48.4
AL3G43230 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 3.1e-30 137.5 191 45.0
SEGI_10222 Sequoiadendron giganteum HOM05D004212 ORTHO05D005128 2.6e-29 134.4 167 44.9
arahy.Tifrunner.gnm1.ann1.U24FMU Arachis hypogaea HOM05D004212 ORTHO05D005128 1.7e-28 131.7 104 61.5
PSO104G0021 Papaver somniferum HOM05D004212 ORTHO05D005128 2.2e-28 131.3 159 44.0
Pp3c12_26190 Physcomitrium patens HOM05D004212 ORTHO05D005128 3.7e-28 130.6 399 29.6
PSO421G0231 Papaver somniferum HOM05D004212 ORTHO05D005128 8.3e-28 129.4 158 45.6
MD12G1200000 Malus domestica HOM05D004212 ORTHO05D005128 1.1e-27 129.0 171 45.6
BraA09t40156Z Brassica rapa HOM05D004212 ORTHO05D005128 1.4e-27 128.6 210 42.4
MD17G1162600 Malus domestica HOM05D004212 ORTHO05D005128 5.4e-27 126.7 147 48.3
A09p46880 Brassica napus HOM05D004212 ORTHO05D005128 7.1e-27 126.3 209 41.1
CBR_g46706 Chara braunii HOM05D004212 ORTHO05D005128 2.7e-26 124.4 428 30.6
Nn2g13527 Nelumbo nucifera HOM05D004212 ORTHO05D005128 2.7e-26 124.4 110 57.3
SEGI_17127 Sequoiadendron giganteum HOM05D004212 ORTHO05D005128 1.7e-25 121.7 105 59.0
PSO104G0005 Papaver somniferum HOM05D004212 ORTHO05D005128 3.9e-25 120.6 173 42.8
PSO104G0091 Papaver somniferum HOM05D004212 ORTHO05D005128 3.9e-25 120.6 173 42.8
SMO115G0073 Selaginella moellendorffii HOM05D004212 ORTHO05D005128 1.5e-24 118.6 168 39.3
RcHm_v2.0_Chr4g0416021 Rosa chinensis HOM05D004212 ORTHO05D005128 1.7e-20 105.1 130 47.7
C08p29190 Brassica napus HOM05D004212 ORTHO05D005128 8.3e-20 102.8 207 36.7
BolC8t50520H Brassica oleracea HOM05D004212 ORTHO05D005128 2.4e-19 101.3 207 36.2
BcaC07g39746 Brassica carinata HOM05D004212 ORTHO05D005128 3.2e-19 100.9 207 36.2
BcaB02g08498 Brassica carinata HOM05D004212 ORTHO05D005128 2.1e-18 98.2 400 28.0
SGA_v2.0_scaffold96G28918 Striga asiatica HOM05D004212 ORTHO05D005128 4.3e-16 90.5 82 58.5
BolC6t39520H Brassica oleracea HOM05D004212 ORTHO05D005128 2.4e-11 74.7 91 44.0
BcaC02g09118 Brassica carinata HOM05D004212 ORTHO05D005128 5.4e-11 73.6 78 50.0
FAN02G2124 Fragaria x ananassa HOM05D004212 ORTHO05D005128 1.6e-10 72.0 149 35.6
TAR633G2132 Trochodendron aralioides HOM05D004212 ORTHO05D005128 2.7e-10 71.2 52 63.5
Lalb_Chr18g0052541 Lupinus albus HOM05D004212 ORTHO05D005128 3.9e-09 67.4 50 68.0
BcaC01g05774 Brassica carinata HOM05D004212 ORTHO05D005128 2.5e-08 64.7 55 52.7
Cfa009861 Carpinus fangiana HOM05D004212 ORTHO05D005128 2.5e-08 64.7 362 24.9
Cre07.g331000 Chlamydomonas reinhardtii HOM05D004212 ORTHO05D005128 1.6e-07 62.0 187 29.9
AagrBONN_evm.TU.Sc2ySwM_344.2315 Anthoceros agrestis HOM05D004212 ORTHO05D005128 4.0e-06 57.4 87 46.0
MCO11G019 Micromonas commoda HOM05D004212 ORTHO05D005128 4.0e-06 57.4 133 33.1


User provided reference genes

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