Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021097.1 Olea europaea HOM05D002318 ORTHO05D004713 2.7e-291 1004.6 500 100.0
Oeu023724.3 Olea europaea HOM05D002318 ORTHO05D004713 3.3e-132 476.1 400 65.5
Oeu050176.1 Olea europaea HOM05D002318 ORTHO05D004713 2.4e-130 469.9 400 64.5
Sed0000373 Sechium edule HOM05D002318 ORTHO05D004713 7.4e-124 448.4 400 62.2
ClCG09G020740 Citrullus lanatus HOM05D002318 ORTHO05D004713 6.3e-123 445.3 427 59.7
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 1.8e-122 443.7 400 62.5
CSS0040724 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D004713 4.1e-122 442.6 400 62.0
Dinv34115 Davidia involucrata HOM05D002318 ORTHO05D004713 7.0e-122 441.8 401 61.8
CSS0024177 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D004713 9.1e-122 441.4 400 61.8
RcHm_v2.0_Chr4g0438861 Rosa chinensis HOM05D002318 ORTHO05D004713 1.5e-121 440.7 400 61.5
Cc11_g12370 Coffea canephora HOM05D002318 ORTHO05D004713 2.0e-121 440.3 400 61.8
Prupe.1G282100 Prunus persica HOM05D002318 ORTHO05D004713 5.9e-121 438.7 400 61.8
MSTRG.7765 Avicennia marina HOM05D002318 ORTHO05D004713 7.7e-121 438.3 400 61.5
Lj6A782G109 Lonicera japonica HOM05D002318 ORTHO05D004713 1.3e-120 437.6 400 61.8
Sc11g0002280 Simmondsia chinensis HOM05D002318 ORTHO05D004713 1.3e-120 437.6 400 61.2
COL.COLO4_27932 Corchorus olitorius HOM05D002318 ORTHO05D004713 1.7e-120 437.2 400 62.0
AUR62007956 Chenopodium quinoa HOM05D002318 ORTHO05D004713 2.2e-120 436.8 400 61.8
MELO3C002919.2 Cucumis melo HOM05D002318 ORTHO05D004713 2.2e-120 436.8 400 61.2
MD16G1064800 Malus domestica HOM05D002318 ORTHO05D004713 2.9e-120 436.4 400 61.0
Migut.E00062 Erythranthe guttata HOM05D002318 ORTHO05D004713 6.5e-120 435.3 400 61.8
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 6.5e-120 435.3 400 61.2
CiPaw.05G127900 Carya illinoinensis HOM05D002318 ORTHO05D004713 8.5e-120 434.9 400 60.5
Gohir.D05G306000 Gossypium hirsutum HOM05D002318 ORTHO05D004713 8.5e-120 434.9 400 60.8
Cpa.g.sc1.88 Carica papaya HOM05D002318 ORTHO05D004713 1.1e-119 434.5 400 61.8
FvH4_4g30490 Fragaria vesca HOM05D002318 ORTHO05D004713 1.1e-119 434.5 400 61.0
FAN12G1805 Fragaria x ananassa HOM05D002318 ORTHO05D004713 1.1e-119 434.5 400 61.0
HanXRQChr08g0211511 Helianthus annuus HOM05D002318 ORTHO05D004713 1.1e-119 434.5 400 60.8
GSVIVG01012178001 Vitis vinifera HOM05D002318 ORTHO05D004713 1.1e-119 434.5 400 60.2
FAN17G0182 Fragaria x ananassa HOM05D002318 ORTHO05D004713 1.5e-119 434.1 400 61.0
FAN22G1596 Fragaria x ananassa HOM05D002318 ORTHO05D004713 1.9e-119 433.7 400 61.0
Ah.02g126610 Amaranthus hybridus HOM05D002318 ORTHO05D004713 2.5e-119 433.3 400 60.5
Potri.010G161500 Populus trichocarpa HOM05D002318 ORTHO05D004713 2.5e-119 433.3 400 61.2
SalBow8G0328 Salvia bowleyana HOM05D002318 ORTHO05D004713 2.5e-119 433.3 400 60.2
Manes.05G107600 Manihot esculenta HOM05D002318 ORTHO05D004713 3.2e-119 433.0 400 61.0
Hma1.2p1_0357F.1_g134430 Hydrangea macrophylla HOM05D002318 ORTHO05D004713 5.5e-119 432.2 399 60.9
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 5.5e-119 432.2 400 59.2
AUR62003137 Chenopodium quinoa HOM05D002318 ORTHO05D004713 7.2e-119 431.8 400 61.2
Migut.L01222 Erythranthe guttata HOM05D002318 ORTHO05D004713 7.2e-119 431.8 400 60.5
Gorai.009G326000 Gossypium raimondii HOM05D002318 ORTHO05D004713 7.2e-119 431.8 400 60.5
Actinidia33242 Actinidia chinensis HOM05D002318 ORTHO05D004713 9.4e-119 431.4 400 60.8
Rhsim10G0189100 Rhododendron simsii HOM05D002318 ORTHO05D004713 9.4e-119 431.4 419 59.4
Ciclev10033452m.g Citrus clementina HOM05D002318 ORTHO05D004713 1.6e-118 430.6 400 60.2
Rhsim12G0076600 Rhododendron simsii HOM05D002318 ORTHO05D004713 1.6e-118 430.6 439 57.4
TAR374G1646 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.6e-118 430.6 400 61.0
CsaV3_5G025630 Cucumis sativus L. HOM05D002318 ORTHO05D004713 2.1e-118 430.3 400 60.8
Duzib251G0769 Durio zibethinus HOM05D002318 ORTHO05D004713 2.1e-118 430.3 400 60.8
MD13G1066000 Malus domestica HOM05D002318 ORTHO05D004713 4.7e-118 429.1 402 60.0
DCAR_007181 Daucus carota HOM05D002318 ORTHO05D004713 6.1e-118 428.7 400 60.0
Gohir.A05G306000 Gossypium hirsutum HOM05D002318 ORTHO05D004713 6.1e-118 428.7 400 59.8
Nn4g23328 Nelumbo nucifera HOM05D002318 ORTHO05D004713 6.1e-118 428.7 401 60.6
QL03p070842 Quercus lobata HOM05D002318 ORTHO05D004713 6.1e-118 428.7 414 58.2
Lj3A1032T69 Lonicera japonica HOM05D002318 ORTHO05D004713 1.0e-117 427.9 400 60.5
PGR102G0166 Punica granatum HOM05D002318 ORTHO05D004713 1.0e-117 427.9 400 60.5
ECA233G0414 Erigeron canadensis HOM05D002318 ORTHO05D004713 2.3e-117 426.8 400 60.0
Actinidia12317 Actinidia chinensis HOM05D002318 ORTHO05D004713 3.0e-117 426.4 400 59.8
Sopen05g007440 Solanum pennellii HOM05D002318 ORTHO05D004713 3.9e-117 426.0 400 60.0
Potri.008G093100 Populus trichocarpa HOM05D002318 ORTHO05D004713 5.2e-117 425.6 400 60.5
Duzib248G0382 Durio zibethinus HOM05D002318 ORTHO05D004713 6.7e-117 425.2 400 60.2
Psat2g128200 Pisum sativum HOM05D002318 ORTHO05D004713 6.7e-117 425.2 400 59.8
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 6.7e-117 425.2 400 59.8
Lj2g0006739 Lotus japonicus HOM05D002318 ORTHO05D004713 8.8e-117 424.9 400 59.8
Duzib268G0995 Durio zibethinus HOM05D002318 ORTHO05D004713 1.1e-116 424.5 430 57.0
Hund05861 Selenicereus undatus HOM05D002318 ORTHO05D004713 1.1e-116 424.5 417 59.2
Thecc.02G336400 Theobroma cacao HOM05D002318 ORTHO05D004713 1.1e-116 424.5 400 60.0
ATR0111G025 Amborella trichopoda HOM05D002318 ORTHO05D004713 1.5e-116 424.1 400 60.0
EL10Ac6g14956 Beta vulgaris HOM05D002318 ORTHO05D004713 2.0e-116 423.7 400 59.5
Solyc05g012610.3 Solanum lycopersicum HOM05D002318 ORTHO05D004713 2.0e-116 423.7 400 60.0
Sopen04g001510 Solanum pennellii HOM05D002318 ORTHO05D004713 2.6e-116 423.3 400 59.8
CAN.G1340.12 Capsicum annuum HOM05D002318 ORTHO05D004713 3.3e-116 422.9 400 59.8
MBI17_g34378_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D004713 3.3e-116 422.9 400 60.0
PGSC0003DMG401028328 Solanum tuberosum HOM05D002318 ORTHO05D004713 3.3e-116 422.9 400 59.5
Gohir.A13G080000 Gossypium hirsutum HOM05D002318 ORTHO05D004713 4.4e-116 422.5 400 59.5
THA.LOC104822900 Tarenaya hassleriana HOM05D002318 ORTHO05D004713 4.4e-116 422.5 400 59.5
HPP92_022583 Vanilla planifolia HOM05D002318 ORTHO05D004713 5.7e-116 422.2 400 59.0
Ca_04909_v3 Cicer arietinum L. HOM05D002318 ORTHO05D004713 7.4e-116 421.8 400 59.2
Nitab4.5_0002806g0070 Nicotiana tabacum HOM05D002318 ORTHO05D004713 9.7e-116 421.4 400 59.8
PGSC0003DMG400002818 Solanum tuberosum HOM05D002318 ORTHO05D004713 2.2e-115 420.2 400 59.0
TWI79G0696 Tripterygium wilfordii HOM05D002318 ORTHO05D004713 2.2e-115 420.2 400 59.5
Atru.chr11.1689 Acer truncatum HOM05D002318 ORTHO05D004713 2.8e-115 419.9 432 57.2
Glyma.20G027400 Glycine max HOM05D002318 ORTHO05D004713 3.7e-115 419.5 400 58.0
Gorai.013G091300 Gossypium raimondii HOM05D002318 ORTHO05D004713 3.7e-115 419.5 400 59.2
Peaxi162Scf00314g00033 Petunia axillaris HOM05D002318 ORTHO05D004713 3.7e-115 419.5 400 59.5
unitig_26.g10292 Utricularia gibba HOM05D002318 ORTHO05D004713 3.7e-115 419.5 407 58.7
Thhalv10018352m.g Eutrema salsugineum HOM05D002318 ORTHO05D004713 4.8e-115 419.1 400 59.0
TPR.G34090 Trifolium pratense HOM05D002318 ORTHO05D004713 4.8e-115 419.1 400 58.2
arahy.Tifrunner.gnm1.ann1.R2RWAX Arachis hypogaea HOM05D002318 ORTHO05D004713 8.2e-115 418.3 402 58.5
arahy.Tifrunner.gnm1.ann1.XTY9PQ Arachis hypogaea HOM05D002318 ORTHO05D004713 8.2e-115 418.3 400 58.5
CARHR062230 Cardamine hirsuta HOM05D002318 ORTHO05D004713 8.2e-115 418.3 400 58.2
Eucgr.B03179 Eucalyptus grandis HOM05D002318 ORTHO05D004713 8.2e-115 418.3 400 59.0
Sp5g24400 Schrenkiella parvula HOM05D002318 ORTHO05D004713 1.1e-114 417.9 400 59.0
AL2G28450 Arabidopsis lyrata HOM05D002318 ORTHO05D004713 1.4e-114 417.5 400 58.5
Medtr5g043560 Medicago truncatula HOM05D002318 ORTHO05D004713 1.4e-114 417.5 400 58.8
Haze_11933 Corylus avellana HOM05D002318 ORTHO05D004713 1.8e-114 417.2 441 56.2
Medtr4g082640 Medicago truncatula HOM05D002318 ORTHO05D004713 1.8e-114 417.2 400 58.0
Solyc04g005490.3 Solanum lycopersicum HOM05D002318 ORTHO05D004713 1.8e-114 417.2 400 58.8
TPR.G22404 Trifolium pratense HOM05D002318 ORTHO05D004713 1.8e-114 417.2 400 58.8
Lalb_Chr17g0340991 Lupinus albus HOM05D002318 ORTHO05D004713 2.4e-114 416.8 400 59.8
THA.LOC104808588 Tarenaya hassleriana HOM05D002318 ORTHO05D004713 2.4e-114 416.8 400 59.0
AT1G69340 Arabidopsis thaliana HOM05D002318 ORTHO05D004713 5.3e-114 415.6 400 58.2
Carub.0002s1594 Capsella rubella HOM05D002318 ORTHO05D004713 5.3e-114 415.6 400 58.2
Ca_25952_v3 Cicer arietinum L. HOM05D002318 ORTHO05D004713 5.3e-114 415.6 400 57.2
BcaB05g24443 Brassica carinata HOM05D002318 ORTHO05D004713 1.2e-113 414.5 401 58.4
PSO017G1201 Papaver somniferum HOM05D002318 ORTHO05D004713 1.2e-113 414.5 404 57.4
Aqoxy3G03554 Aquilegia oxysepala HOM05D002318 ORTHO05D004713 1.6e-113 414.1 400 59.2
MSTRG.13441 Avicennia marina HOM05D002318 ORTHO05D004713 1.6e-113 414.1 400 59.5
CANSAT64G1373 Cannabis sativa HOM05D002318 ORTHO05D004713 1.6e-113 414.1 397 59.9
PSO478G2077 Papaver somniferum HOM05D002318 ORTHO05D004713 2.0e-113 413.7 404 58.2
A07p35630 Brassica napus HOM05D002318 ORTHO05D004713 3.5e-113 412.9 401 58.6
C06p40580 Brassica napus HOM05D002318 ORTHO05D004713 5.9e-113 412.1 401 58.6
BolC6t39374H Brassica oleracea HOM05D002318 ORTHO05D004713 5.9e-113 412.1 401 58.6
BraA07t31151Z Brassica rapa HOM05D002318 ORTHO05D004713 5.9e-113 412.1 401 58.4
C02p26300 Brassica napus HOM05D002318 ORTHO05D004713 7.7e-113 411.8 400 58.2
Nitab4.5_0000014g0270 Nicotiana tabacum HOM05D002318 ORTHO05D004713 7.7e-113 411.8 426 56.8
Glyma.01G055300 Glycine max HOM05D002318 ORTHO05D004713 1.0e-112 411.4 402 57.5
Lalb_Chr16g0385621 Lupinus albus HOM05D002318 ORTHO05D004713 1.7e-112 410.6 400 57.8
VMungo0251G1052 Vigna mungo HOM05D002318 ORTHO05D004713 1.7e-112 410.6 400 57.0
Phvul.002G167900 Phaseolus vulgaris HOM05D002318 ORTHO05D004713 2.2e-112 410.2 400 56.8
CiPaw.06G090500 Carya illinoinensis HOM05D002318 ORTHO05D004713 2.9e-112 409.8 400 57.8
BcaC03g15074 Brassica carinata HOM05D002318 ORTHO05D004713 5.0e-112 409.1 401 58.4
Glyma.02G113700 Glycine max HOM05D002318 ORTHO05D004713 6.5e-112 408.7 399 58.1
Phvul.002G069100 Phaseolus vulgaris HOM05D002318 ORTHO05D004713 6.5e-112 408.7 400 57.8
Os10g0444400 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D004713 8.5e-112 408.3 400 58.5
Hma1.2p1_0354F.1_g133630 Hydrangea macrophylla HOM05D002318 ORTHO05D004713 1.1e-111 407.9 399 58.6
SGA_v2.0_scaffold63G21634 Striga asiatica HOM05D002318 ORTHO05D004713 1.5e-111 407.5 360 62.2
HanXRQChr17g0545451 Helianthus annuus HOM05D002318 ORTHO05D004713 1.9e-111 407.1 402 57.0
VMungo1215G3203 Vigna mungo HOM05D002318 ORTHO05D004713 1.9e-111 407.1 400 57.0
Aa31LG4G11530 Aethionema arabicum HOM05D002318 ORTHO05D004713 2.5e-111 406.8 400 57.5
BolC2t08701H Brassica oleracea HOM05D002318 ORTHO05D004713 2.5e-111 406.8 401 58.1
PSO409G0025 Papaver somniferum HOM05D002318 ORTHO05D004713 5.5e-111 405.6 406 58.6
CDE04G3596 Ceratophyllum demersum HOM05D002318 ORTHO05D004713 9.4e-111 404.8 400 57.5
ECA246G1706 Erigeron canadensis HOM05D002318 ORTHO05D004713 9.4e-111 404.8 400 57.0
A02p15840 Brassica napus HOM05D002318 ORTHO05D004713 1.2e-110 404.4 400 57.8
Sed0026215 Sechium edule HOM05D002318 ORTHO05D004713 2.7e-110 403.3 360 61.7
SEGI_36557 Sequoiadendron giganteum HOM05D002318 ORTHO05D004713 1.4e-109 401.0 400 57.0
Zm00001eb004120 Zea mays HOM05D002318 ORTHO05D004713 2.3e-109 400.2 400 56.8
Zm00001eb047110 Zea mays HOM05D002318 ORTHO05D004713 2.3e-109 400.2 400 57.5
Eucgr.G02463 Eucalyptus grandis HOM05D002318 ORTHO05D004713 2.0e-108 397.1 397 56.7
Lsat_1_v5_gn_3_56320 Lactuca sativa HOM05D002318 ORTHO05D004713 6.3e-107 392.1 416 54.6
MBI17_g16776_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D004713 2.4e-106 390.2 360 60.3
Nitab4.5_0000334g0250 Nicotiana tabacum HOM05D002318 ORTHO05D004713 7.0e-106 388.7 385 57.4
Actinidia31947 Actinidia chinensis HOM05D002318 ORTHO05D004713 1.3e-104 384.4 399 56.4
Aa31LG7G8480 Aethionema arabicum HOM05D002318 ORTHO05D004713 3.8e-104 382.9 426 53.1
arahy.Tifrunner.gnm1.ann1.MP45AK Arachis hypogaea HOM05D002318 ORTHO05D004713 1.1e-103 381.3 400 55.5
arahy.Tifrunner.gnm1.ann1.KSM55U Arachis hypogaea HOM05D002318 ORTHO05D004713 1.2e-102 377.9 414 53.9
vmacro01329 Vaccinium macrocarpon HOM05D002318 ORTHO05D004713 1.0e-101 374.8 420 53.6
Manes.01G030200 Manihot esculenta HOM05D002318 ORTHO05D004713 4.0e-101 372.9 338 62.7
Sabra08G0069900 Salix brachista HOM05D002318 ORTHO05D004713 8.3e-99 365.2 332 62.7
Pp3c3_20410 Physcomitrium patens HOM05D002318 ORTHO05D004713 5.5e-95 352.4 401 50.4
AagrBONN_evm.TU.Sc2ySwM_117.1854 Anthoceros agrestis HOM05D002318 ORTHO05D004713 1.6e-94 350.9 400 51.8
Mapoly0008s0106 Marchantia polymorpha HOM05D002318 ORTHO05D004713 1.6e-94 350.9 402 49.3
Pp3c13_22190 Physcomitrium patens HOM05D002318 ORTHO05D004713 1.5e-92 344.4 401 49.4
SMO118G0381 Selaginella moellendorffii HOM05D002318 ORTHO05D004713 1.7e-91 340.9 400 47.5
CBR_g6630 Chara braunii HOM05D002318 ORTHO05D004713 9.2e-82 308.5 401 46.1
TWI75G1795 Tripterygium wilfordii HOM05D002318 ORTHO05D004713 1.1e-74 285.0 400 46.0
Psat7g154400 Pisum sativum HOM05D002318 ORTHO05D004713 2.0e-68 264.2 197 70.1
Glyma.07G226267 Glycine max HOM05D002318 ORTHO05D004713 3.4e-68 263.5 197 67.5
Gohir.D13G079800 Gossypium hirsutum HOM05D002318 ORTHO05D004713 1.4e-66 258.1 273 55.7
Os03g0151100 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D004713 3.5e-57 226.9 254 52.4
Oeu047602.1 Olea europaea HOM05D019644 ORTHO05D003643 6.2e-38 162.9 96 90.6
Oeu010386.1 Olea europaea HOM05D019644 ORTHO05D288813 9.0e-37 159.1 93 91.4
Oeu018546.1 Olea europaea HOM05D019644 ORTHO05D010786 2.0e-36 157.9 134 67.2
Oeu038870.1 Olea europaea HOM05D019644 ORTHO05D003643 4.9e-35 153.3 93 88.2
Psat7g154360 Pisum sativum HOM05D002318 ORTHO05D004713 1.1e-23 115.5 63 84.1
Oeu048824.1 Olea europaea HOM05D001105 ORTHO05D003643 5.0e-11 73.6 65 72.3
Medtr6g025065 Medicago truncatula HOM05D002318 ORTHO05D004713 3.6e-09 67.4 145 35.9
Oeu016437.1 Olea europaea HOM05D000352 ORTHO05D000260 1.0e-08 65.9 47 63.8
Oeu039525.4 Olea europaea HOM05D000001 ORTHO05D000003 1.8e-08 65.1 44 70.5
CBR_g32706 Chara braunii HOM05D000019 ORTHO05D000002 6.7e-08 63.2 79 39.2
Lsat_1_v5_gn_2_120121 Lactuca sativa HOM05D002318 ORTHO05D004713 1.3e-06 58.9 38 73.7


User provided reference genes

Program Settings