Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.3e-97 359.8 187 100.0
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 8.0e-31 137.9 278 40.6
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 5.2e-30 135.2 282 38.3
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 3.4e-29 132.5 348 34.5
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 4.4e-29 132.1 287 38.7
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 1.1e-27 127.5 282 37.2
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 1.6e-26 123.6 276 38.0
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 1.6e-26 123.6 293 36.9
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 2.7e-26 122.9 289 37.0
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 3.0e-25 119.4 282 36.9
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 6.6e-25 118.2 292 36.3
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 6.6e-25 118.2 290 36.2
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 1.1e-24 117.5 291 35.7
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 2.5e-24 116.3 283 36.4
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 3.3e-24 115.9 284 37.0
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 4.3e-24 115.5 286 35.7
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 7.3e-24 114.8 262 38.2
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.1e-23 113.2 284 36.3
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 2.8e-23 112.8 283 33.9
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 3.6e-23 112.5 294 34.7
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 3.1e-22 109.4 289 33.9
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 3.1e-22 109.4 284 34.2
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 3.1e-22 109.4 284 34.9
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 4.0e-22 109.0 281 34.2
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 6.8e-22 108.2 234 35.5
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 6.8e-22 108.2 283 33.6
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 6.8e-22 108.2 287 35.5
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 8.9e-22 107.8 281 36.3
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 1.2e-21 107.5 291 35.4
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 2.0e-21 106.7 283 33.9
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 2.0e-21 106.7 284 36.3
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 2.6e-21 106.3 289 35.3
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 3.4e-21 105.9 292 34.6
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 5.8e-21 105.1 293 35.8
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 2.2e-20 103.2 286 35.0
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 2.9e-20 102.8 290 34.1
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 4.9e-20 102.1 284 33.5
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 4.9e-20 102.1 298 33.6
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 6.4e-20 101.7 282 34.0
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 6.4e-20 101.7 298 33.9
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 8.3e-20 101.3 304 33.2
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 1.4e-19 100.5 73 72.6
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.4e-19 100.5 280 33.6
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 1.9e-19 100.1 136 50.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 3.2e-19 99.4 292 32.2
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 3.2e-19 99.4 282 33.7
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 4.1e-19 99.0 292 32.2
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 5.4e-19 98.6 220 35.9
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 9.2e-19 97.8 295 33.6
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 1.2e-18 97.4 298 33.9
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 2.7e-18 96.3 283 33.9
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 3.5e-18 95.9 288 34.0
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.6e-18 95.5 315 32.4
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 7.8e-18 94.7 284 32.0
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.0e-17 94.4 284 34.2
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 1.0e-17 94.4 284 34.2
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 1.3e-17 94.0 276 33.3
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 1.3e-17 94.0 284 33.8
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.3e-17 94.0 291 32.0
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 3.0e-17 92.8 284 33.8
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 5.1e-17 92.0 153 47.1
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 8.6e-17 91.3 288 31.9
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 5.6e-16 88.6 289 31.5
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 9.5e-16 87.8 288 33.3
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 9.5e-16 87.8 269 32.3
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.1e-15 86.7 141 44.0
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 3.6e-15 85.9 285 32.6
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 4.7e-15 85.5 287 31.0
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 6.2e-15 85.1 302 28.5
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 6.2e-15 85.1 278 32.4
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 6.2e-15 85.1 280 32.9
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 8.1e-15 84.7 282 30.9
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 1.1e-14 84.3 276 31.9
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.8e-14 83.6 173 37.0
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 2.3e-14 83.2 194 34.0
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.0e-14 82.4 280 30.7
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 8.9e-14 81.3 287 30.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 8.9e-14 81.3 132 41.7
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 1.2e-13 80.9 286 32.2
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 1.2e-13 80.9 127 45.7
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 1.5e-13 80.5 142 42.3
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 2.6e-13 79.7 67 64.2
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 3.4e-13 79.3 203 34.0
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 4.4e-13 79.0 209 31.6
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 4.4e-13 79.0 279 31.2
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 5.8e-13 78.6 279 31.2
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 5.8e-13 78.6 290 29.7
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 7.6e-13 78.2 287 30.0
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.7e-12 77.0 145 39.3
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 4.9e-12 75.5 222 30.2
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 1.4e-11 73.9 242 29.8
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 1.9e-11 73.6 256 32.8
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 2.4e-11 73.2 189 32.8
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 3.2e-11 72.8 208 31.2
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 7.1e-11 71.6 317 28.1
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 7.1e-11 71.6 226 29.6
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.2e-10 70.9 55 65.5
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 2.7e-10 69.7 197 31.5
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 6.0e-10 68.6 98 43.9
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 2.3e-09 66.6 125 40.0
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 3.0e-09 66.2 240 29.2
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 8.6e-09 64.7 43 79.1
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.5e-08 63.9 280 28.6
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.9e-08 63.5 43 76.7
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 3.3e-08 62.8 118 39.0
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 4.3e-08 62.4 190 28.9
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 7.3e-08 61.6 46 71.7
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 6.2e-07 58.5 38 71.1
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 1.1e-06 57.8 46 65.2
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.1e-06 57.8 42 69.0
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 2.4e-06 56.6 220 27.7
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 8.9e-06 54.7 37 70.3


User provided reference genes

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