Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu021067.1 Olea europaea HOM05D005262 ORTHO05D006590 5.1e-56 220.7 101 100.0
Oeu054855.1 Olea europaea HOM05D005262 ORTHO05D006590 2.0e-36 155.6 78 93.6
CAN.G293.9 Capsicum annuum HOM05D005262 ORTHO05D006590 2.3e-32 142.1 78 83.3
Solyc07g017410.3 Solanum lycopersicum HOM05D005262 ORTHO05D006590 1.1e-31 139.8 78 82.1
Sopen07g006120 Solanum pennellii HOM05D005262 ORTHO05D006590 1.1e-31 139.8 78 82.1
PGSC0003DMG400009555 Solanum tuberosum HOM05D005262 ORTHO05D006590 1.1e-31 139.8 78 82.1
Nitab4.5_0005903g0020 Nicotiana tabacum HOM05D005262 ORTHO05D006590 1.5e-31 139.4 78 84.6
Nitab4.5_0001147g0090 Nicotiana tabacum HOM05D005262 ORTHO05D006590 1.9e-31 139.0 78 83.3
Peaxi162Scf00320g00123 Petunia axillaris HOM05D005262 ORTHO05D006590 5.7e-31 137.5 75 84.0
Dinv34128 Davidia involucrata HOM05D005262 ORTHO05D006590 7.4e-31 137.1 78 80.8
Cpa.g.sc57.36 Carica papaya HOM05D005262 ORTHO05D006590 3.7e-30 134.8 78 82.1
TAR496G0001 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.7e-30 134.8 78 76.9
TAR629G1254 Trochodendron aralioides HOM05D005262 ORTHO05D006590 3.7e-30 134.8 78 76.9
CSS0022308 Camellia sinensis var. sinensis HOM05D005262 ORTHO05D006590 1.8e-29 132.5 78 78.2
MSTRG.11557 Avicennia marina HOM05D005262 ORTHO05D006590 2.4e-29 132.1 78 76.9
Cc00_g16620 Coffea canephora HOM05D005262 ORTHO05D006590 2.4e-29 132.1 78 75.6
Migut.O00263 Erythranthe guttata HOM05D005262 ORTHO05D006590 6.9e-29 130.6 78 75.6
CiPaw.05G130500 Carya illinoinensis HOM05D005262 ORTHO05D006590 1.2e-28 129.8 78 78.2
QL03p069106 Quercus lobata HOM05D005262 ORTHO05D006590 1.5e-28 129.4 78 79.5
QL07p005102 Quercus lobata HOM05D005262 ORTHO05D006590 1.5e-28 129.4 78 79.5
QL93p1999_0168 Quercus lobata HOM05D005262 ORTHO05D006590 1.5e-28 129.4 78 79.5
SGA_v2.0_scaffold25G10746 Striga asiatica HOM05D005262 ORTHO05D006590 2.0e-28 129.0 78 75.6
Aqoxy1G02417 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 2.6e-28 128.6 78 73.1
MD07G1136300 Malus domestica HOM05D005262 ORTHO05D006590 4.5e-28 127.9 78 79.5
Nn4g23238 Nelumbo nucifera HOM05D005262 ORTHO05D006590 4.5e-28 127.9 78 73.1
PSO063G7616 Papaver somniferum HOM05D005262 ORTHO05D006590 4.5e-28 127.9 78 74.4
PSO832G0345 Papaver somniferum HOM05D005262 ORTHO05D006590 1.0e-27 126.7 78 73.1
GSVIVG01005152001 Vitis vinifera HOM05D005262 ORTHO05D006590 1.3e-27 126.3 78 76.9
SGA_v2.0_scaffold90G27753 Striga asiatica HOM05D005262 ORTHO05D006590 1.7e-27 125.9 78 73.1
Thecc.10G075900 Theobroma cacao HOM05D005262 ORTHO05D006590 1.7e-27 125.9 78 75.6
Sc04g0007950 Simmondsia chinensis HOM05D005262 ORTHO05D006590 2.2e-27 125.6 78 71.8
MD01G1063000 Malus domestica HOM05D005262 ORTHO05D006590 2.9e-27 125.2 78 78.2
AUR62032822 Chenopodium quinoa HOM05D005262 ORTHO05D006590 5.0e-27 124.4 78 67.9
TAR365G0711 Trochodendron aralioides HOM05D005262 ORTHO05D006590 5.0e-27 124.4 71 77.5
DCAR_013139 Daucus carota HOM05D005262 ORTHO05D006590 6.5e-27 124.0 78 71.8
Potri.010G165500 Populus trichocarpa HOM05D005262 ORTHO05D006590 1.1e-26 123.2 78 71.8
TWI59G0657 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.1e-26 123.2 78 73.1
TWI23G0893 Tripterygium wilfordii HOM05D005262 ORTHO05D006590 1.9e-26 122.5 78 71.8
GSVIVG01012217001 Vitis vinifera HOM05D005262 ORTHO05D006590 1.9e-26 122.5 78 73.1
HPP92_008614 Vanilla planifolia HOM05D005262 ORTHO05D006590 3.2e-26 121.7 78 67.9
Aqoxy2G00811 Aquilegia oxysepala HOM05D005262 ORTHO05D006590 4.2e-26 121.3 78 69.2
Prupe.2G171300 Prunus persica HOM05D005262 ORTHO05D006590 5.5e-26 120.9 78 73.1
Duzib114G0995 Durio zibethinus HOM05D005262 ORTHO05D006590 7.2e-26 120.6 78 73.1
Lj7A251G27 Lonicera japonica HOM05D005262 ORTHO05D006590 9.4e-26 120.2 78 74.4
Atru.chr11.1609 Acer truncatum HOM05D005262 ORTHO05D006590 1.2e-25 119.8 78 69.2
ClCG00G005120 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-25 119.4 78 69.2
ClCG05G024080 Citrullus lanatus HOM05D005262 ORTHO05D006590 1.6e-25 119.4 78 69.2
Hma1.2p1_1954F.1_g308920 Hydrangea macrophylla HOM05D005262 ORTHO05D006590 1.6e-25 119.4 98 60.2
Os12g0209100 Oryza sativa ssp. japonica HOM05D005262 ORTHO05D006590 1.6e-25 119.4 78 66.7
HanXRQChr15g0476911 Helianthus annuus HOM05D005262 ORTHO05D006590 2.7e-25 118.6 96 60.4
unitig_749.g14151 Utricularia gibba HOM05D005262 ORTHO05D006590 2.7e-25 118.6 78 67.9
Cfa008943 Carpinus fangiana HOM05D005262 ORTHO05D006590 3.6e-25 118.2 78 74.4
Lj8C474T0 Lonicera japonica HOM05D005262 ORTHO05D006590 3.6e-25 118.2 78 73.1
Haze_11969 Corylus avellana HOM05D001063 ORTHO05D000986 4.6e-25 117.9 75 76.0
Eucgr.I00218 Eucalyptus grandis HOM05D005262 ORTHO05D006590 6.1e-25 117.5 76 73.7
Gohir.A05G412300 Gossypium hirsutum HOM05D005262 ORTHO05D006590 6.1e-25 117.5 78 71.8
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 7.9e-25 117.1 78 64.1
Zm00001eb163570 Zea mays HOM05D005262 ORTHO05D006590 7.9e-25 117.1 79 67.1
Gohir.D04G003700 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.0e-24 116.7 78 71.8
Gorai.012G004900 Gossypium raimondii HOM05D005262 ORTHO05D006590 1.0e-24 116.7 78 71.8
Sed0024226 Sechium edule HOM05D005262 ORTHO05D006590 1.0e-24 116.7 78 67.9
PGR102G3250 Punica granatum HOM05D005262 ORTHO05D006590 1.4e-24 116.3 78 70.5
EL10Ac8g18975 Beta vulgaris HOM05D005262 ORTHO05D006590 1.8e-24 115.9 78 65.4
Rhsim09G0138500 Rhododendron simsii HOM05D005262 ORTHO05D006590 1.8e-24 115.9 78 69.2
HanXRQChr17g0545311 Helianthus annuus HOM05D005262 ORTHO05D006590 5.1e-24 114.4 78 66.7
Lj8C444T0 Lonicera japonica HOM05D005262 ORTHO05D006590 5.1e-24 114.4 76 72.4
Lsat_1_v5_gn_3_51960 Lactuca sativa HOM05D005262 ORTHO05D006590 6.7e-24 114.0 96 55.2
CsaV3_5G032960 Cucumis sativus L. HOM05D005262 ORTHO05D006590 8.8e-24 113.6 78 62.8
SalBow6G1526 Salvia bowleyana HOM05D005262 ORTHO05D006590 8.8e-24 113.6 79 64.6
Hund04408 Selenicereus undatus HOM05D005262 ORTHO05D006590 8.8e-24 113.6 78 67.9
Gohir.A10G054500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 1.1e-23 113.2 78 69.2
Gorai.011G060300 Gossypium raimondii HOM05D005262 ORTHO05D006590 1.1e-23 113.2 78 69.2
Lalb_Chr12g0202851 Lupinus albus HOM05D005262 ORTHO05D006590 1.5e-23 112.8 78 62.8
MELO3C012117.2 Cucumis melo HOM05D005262 ORTHO05D006590 2.5e-23 112.1 78 64.1
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.7e-23 110.9 78 64.1
arahy.Tifrunner.gnm1.ann1.XG4VM3 Arachis hypogaea HOM05D005262 ORTHO05D006590 7.4e-23 110.5 76 61.8
COL.COLO4_28415 Corchorus olitorius HOM05D005262 ORTHO05D006590 7.4e-23 110.5 78 66.7
Lj7C254T2 Lonicera japonica HOM05D005262 ORTHO05D006590 7.4e-23 110.5 75 70.7
arahy.Tifrunner.gnm1.ann1.EK09V6 Arachis hypogaea HOM05D005262 ORTHO05D006590 9.7e-23 110.2 76 61.8
Ciclev10032849m.g Citrus clementina HOM05D005262 ORTHO05D006590 9.7e-23 110.2 78 65.4
FvH4_1g30250 Fragaria vesca HOM05D005262 ORTHO05D006590 9.7e-23 110.2 78 65.4
Lj2g0009005 Lotus japonicus HOM05D005262 ORTHO05D006590 9.7e-23 110.2 78 60.3
Ca_02973_v3 Cicer arietinum L. HOM05D005262 ORTHO05D006590 1.3e-22 109.8 82 61.0
FAN26G2856 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.3e-22 109.8 78 65.4
VMungo1215G2947 Vigna mungo HOM05D005262 ORTHO05D006590 1.3e-22 109.8 78 61.5
Sabra10G0125800 Salix brachista HOM05D005262 ORTHO05D006590 1.7e-22 109.4 100 56.0
ATR0810G029 Amborella trichopoda HOM05D005262 ORTHO05D006590 4.8e-22 107.8 77 61.0
Glyma.02G110400 Glycine max HOM05D005262 ORTHO05D006590 4.8e-22 107.8 78 60.3
TPR.G4647 Trifolium pratense HOM05D005262 ORTHO05D006590 4.8e-22 107.8 78 57.7
Glyma.01G052200 Glycine max HOM05D005262 ORTHO05D006590 8.2e-22 107.1 78 60.3
Lj6g0009238 Lotus japonicus HOM05D005262 ORTHO05D006590 8.2e-22 107.1 78 57.7
Psat1g094200 Pisum sativum HOM05D005262 ORTHO05D006590 8.2e-22 107.1 78 59.0
FAN19G1549 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.4e-21 106.3 78 64.1
CAN.G228.3 Capsicum annuum HOM05D005262 ORTHO05D006590 1.8e-21 105.9 66 77.3
FAN23G1362 Fragaria x ananassa HOM05D005262 ORTHO05D006590 1.8e-21 105.9 78 64.1
Phvul.003G046600 Phaseolus vulgaris HOM05D005262 ORTHO05D006590 1.8e-21 105.9 101 49.5
THA.LOC104818198 Tarenaya hassleriana HOM05D005262 ORTHO05D006590 9.1e-21 103.6 78 60.3
Medtr2g087760 Medicago truncatula HOM05D005262 ORTHO05D006590 1.2e-20 103.2 82 57.3
CANSAT80G0446 Cannabis sativa HOM05D005262 ORTHO05D006590 1.5e-20 102.8 78 57.7
Aa31LG7G8380 Aethionema arabicum HOM05D005262 ORTHO05D006590 3.4e-20 101.7 96 54.2
Medtr8g006800 Medicago truncatula HOM05D005262 ORTHO05D006590 4.5e-20 101.3 82 56.1
Manes.01G033800 Manihot esculenta HOM05D005262 ORTHO05D006590 7.7e-20 100.5 78 59.0
CDE02G1435 Ceratophyllum demersum HOM05D005262 ORTHO05D006590 3.2e-18 95.1 77 55.8
CARHR025210 Cardamine hirsuta HOM05D005262 ORTHO05D006590 4.2e-18 94.7 78 55.1
Carub.0001s2427 Capsella rubella HOM05D005262 ORTHO05D006590 1.2e-17 93.2 78 55.1
Eucgr.L00661 Eucalyptus grandis HOM05D005262 ORTHO05D006590 2.1e-17 92.4 58 79.3
AL1G38960 Arabidopsis lyrata HOM05D005262 ORTHO05D006590 2.7e-17 92.0 78 53.8
SEGI_18406 Sequoiadendron giganteum HOM05D005262 ORTHO05D006590 2.7e-17 92.0 78 53.8
Thhalv10008835m.g Eutrema salsugineum HOM05D005262 ORTHO05D006590 4.7e-17 91.3 78 52.6
AT1G26750 Arabidopsis thaliana HOM05D005262 ORTHO05D006590 6.1e-17 90.9 78 53.8
BcaC06g35126 Brassica carinata HOM05D005262 ORTHO05D006590 7.9e-17 90.5 78 51.3
A07p13080 Brassica napus HOM05D005262 ORTHO05D006590 7.9e-17 90.5 78 51.3
Sp1g22060 Schrenkiella parvula HOM05D005262 ORTHO05D006590 1.8e-16 89.4 78 50.0
BcaB03g14087 Brassica carinata HOM05D005262 ORTHO05D006590 2.3e-16 89.0 78 50.0
C07p19560 Brassica napus HOM05D005262 ORTHO05D006590 2.3e-16 89.0 78 50.0
BolC7t42473H Brassica oleracea HOM05D005262 ORTHO05D006590 2.3e-16 89.0 78 50.0
BraA07t29079Z Brassica rapa HOM05D005262 ORTHO05D006590 2.3e-16 89.0 78 51.3
A09p40160 Brassica napus HOM05D005262 ORTHO05D006590 3.0e-16 88.6 78 51.3
C05p24220 Brassica napus HOM05D005262 ORTHO05D006590 3.0e-16 88.6 78 51.3
BraA09t39514Z Brassica rapa HOM05D005262 ORTHO05D006590 3.0e-16 88.6 78 51.3
BolC5t31158H Brassica oleracea HOM05D005262 ORTHO05D006590 3.7e-14 81.6 79 48.1
BcaC05g26391 Brassica carinata HOM05D005262 ORTHO05D006590 1.9e-10 69.3 64 48.4
Eucgr.L00657 Eucalyptus grandis HOM05D005262 ORTHO05D006590 1.0e-08 63.5 77 50.6
CBR_g30169 Chara braunii HOM05D005262 ORTHO05D006590 4.0e-08 61.6 71 38.0
vmacro10351 Vaccinium macrocarpon HOM05D005262 ORTHO05D006590 2.0e-07 59.3 35 80.0
Gohir.D10G056500 Gossypium hirsutum HOM05D005262 ORTHO05D006590 2.2e-06 55.8 35 71.4
Haze_01349 Corylus avellana HOM05D005262 ORTHO05D006590 4.8e-06 54.7 34 76.5


User provided reference genes

Program Settings