Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020912.1 Olea europaea HOM05D003215 ORTHO05D003735 1.2e-114 416.4 198 100.0
Oeu050248.1 Olea europaea HOM05D003215 ORTHO05D003735 6.0e-69 264.6 201 62.2
Oeu046322.1 Olea europaea HOM05D003215 ORTHO05D003735 3.3e-67 258.8 201 60.7
MSTRG.4371 Avicennia marina HOM05D003215 ORTHO05D003735 7.4e-67 257.7 201 60.7
Nitab4.5_0004170g0030 Nicotiana tabacum HOM05D003215 ORTHO05D003735 5.3e-65 251.5 201 60.2
SalBow6G4532 Salvia bowleyana HOM05D003215 ORTHO05D003735 9.0e-65 250.8 201 58.2
CAN.G3121.3 Capsicum annuum HOM05D003215 ORTHO05D003735 1.2e-64 250.4 201 59.2
CAN.G861.12 Capsicum annuum HOM05D003215 ORTHO05D003735 1.2e-64 250.4 201 59.2
CAN.G861.14 Capsicum annuum HOM05D003215 ORTHO05D003735 1.2e-64 250.4 201 59.2
unitig_52.g17692 Utricularia gibba HOM05D003215 ORTHO05D003735 5.8e-64 248.1 201 57.7
Sopen03g029820 Solanum pennellii HOM05D003215 ORTHO05D003735 1.0e-63 247.3 201 58.7
PGSC0003DMG400015274 Solanum tuberosum HOM05D003215 ORTHO05D003735 1.7e-63 246.5 201 58.2
Lj4C675G2 Lonicera japonica HOM05D003215 ORTHO05D003735 2.2e-63 246.1 201 59.2
SGA_v2.0_scaffold114G31828 Striga asiatica HOM05D003215 ORTHO05D003735 3.8e-63 245.4 201 58.2
Lj4C665T1 Lonicera japonica HOM05D003215 ORTHO05D003735 1.4e-62 243.4 201 58.7
Peaxi162Scf00029g00131 Petunia axillaris HOM05D003215 ORTHO05D003735 2.5e-62 242.7 201 58.2
Cc11_g08560 Coffea canephora HOM05D003215 ORTHO05D003735 3.2e-62 242.3 197 58.9
Solyc03g019800.4 Solanum lycopersicum HOM05D003215 ORTHO05D003735 5.5e-62 241.5 182 61.5
Nitab4.5_0000712g0010 Nicotiana tabacum HOM05D003215 ORTHO05D003735 3.5e-61 238.8 201 58.2
Peaxi162Scf01390g00031 Petunia axillaris HOM05D001168 ORTHO05D003735 3.5e-61 238.8 201 56.2
TAR626G0419 Trochodendron aralioides HOM05D003215 ORTHO05D003735 4.6e-61 238.4 201 55.7
Peaxi162Scf01390g00030 Petunia axillaris HOM05D003215 ORTHO05D003735 1.0e-60 237.3 201 55.7
QL09p047318 Quercus lobata HOM05D003215 ORTHO05D003735 1.8e-60 236.5 187 58.3
CiPaw.11G100100 Carya illinoinensis HOM05D003215 ORTHO05D003735 2.3e-60 236.1 201 55.2
QL05p019413 Quercus lobata HOM05D003215 ORTHO05D003735 3.0e-60 235.7 187 57.8
ClCG05G001940 Citrullus lanatus HOM05D003215 ORTHO05D003735 3.9e-60 235.3 201 57.2
Dinv29349 Davidia involucrata HOM05D003215 ORTHO05D003735 5.1e-60 235.0 201 56.2
Nitab4.5_0000185g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 5.1e-60 235.0 201 57.2
Manes.11G149200 Manihot esculenta HOM05D003215 ORTHO05D003735 8.7e-60 234.2 202 57.4
Nitab4.5_0000712g0040 Nicotiana tabacum HOM05D003215 ORTHO05D003735 8.7e-60 234.2 198 58.1
Sed0005911 Sechium edule HOM05D003215 ORTHO05D003735 8.7e-60 234.2 201 56.2
CsaV3_3G009340 Cucumis sativus L. HOM05D003215 ORTHO05D003735 3.3e-59 232.3 201 56.7
PGSC0003DMG400011852 Solanum tuberosum HOM05D003215 ORTHO05D003735 3.3e-59 232.3 201 56.2
Actinidia34779 Actinidia chinensis HOM05D003215 ORTHO05D003735 4.3e-59 231.9 193 58.0
Peaxi162Scf00102g00926 Petunia axillaris HOM05D003215 ORTHO05D003735 4.3e-59 231.9 191 58.6
Sopen08g019870 Solanum pennellii HOM05D003215 ORTHO05D003735 4.3e-59 231.9 201 54.7
MELO3C006154.2 Cucumis melo HOM05D003215 ORTHO05D003735 7.4e-59 231.1 201 57.7
Solyc08g007300.3 Solanum lycopersicum HOM05D003215 ORTHO05D003735 7.4e-59 231.1 201 56.2
Solyc08g066190.2 Solanum lycopersicum HOM05D003215 ORTHO05D003735 7.4e-59 231.1 201 54.7
Sopen08g003240 Solanum pennellii HOM05D003215 ORTHO05D003735 7.4e-59 231.1 201 56.2
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 8.2e-58 227.6 193 55.4
Migut.D01938 Erythranthe guttata HOM05D003215 ORTHO05D003735 1.1e-57 227.3 185 57.3
Cpa.g.sc65.22 Carica papaya HOM05D003215 ORTHO05D003735 1.8e-57 226.5 200 53.5
CiPaw.15G124500 Carya illinoinensis HOM05D003215 ORTHO05D003735 1.8e-57 226.5 201 52.7
BcaB06g26361 Brassica carinata HOM05D003215 ORTHO05D003735 2.4e-57 226.1 199 53.3
Ciclev10030284m.g Citrus clementina HOM05D003215 ORTHO05D003735 3.1e-57 225.7 201 54.2
Nitab4.5_0000185g0060 Nicotiana tabacum HOM05D003215 ORTHO05D003735 4.1e-57 225.3 182 61.5
Nitab4.5_0000712g0020 Nicotiana tabacum HOM05D003215 ORTHO05D003735 6.9e-57 224.6 201 56.2
SGA_v2.0_scaffold124G33628 Striga asiatica HOM05D003215 ORTHO05D003735 1.5e-56 223.4 200 53.5
Ciclev10014556m.g Citrus clementina HOM05D003215 ORTHO05D003735 2.0e-56 223.0 201 53.7
Hma1.2p1_0892F.1_g233410 Hydrangea macrophylla HOM05D003215 ORTHO05D003735 2.0e-56 223.0 186 56.5
CSS0012061 Camellia sinensis var. sinensis HOM05D003215 ORTHO05D003735 2.6e-56 222.6 193 56.5
Hund25131 Selenicereus undatus HOM05D003215 ORTHO05D003735 2.6e-56 222.6 201 53.7
HanXRQChr11g0328481 Helianthus annuus HOM05D003215 ORTHO05D003735 4.5e-56 221.9 187 57.2
Thecc.09G346500 Theobroma cacao HOM05D003215 ORTHO05D003735 5.9e-56 221.5 198 54.5
RcHm_v2.0_Chr5g0058161 Rosa chinensis HOM05D003215 ORTHO05D003735 7.6e-56 221.1 187 56.1
Potri.015G095000 Populus trichocarpa HOM05D003215 ORTHO05D003735 1.0e-55 220.7 201 51.7
Prupe.6G210800 Prunus persica HOM05D003215 ORTHO05D003735 1.0e-55 220.7 199 55.8
COL.COLO4_18286 Corchorus olitorius HOM05D003215 ORTHO05D003735 1.7e-55 219.9 198 53.5
FvH4_3g31460 Fragaria vesca HOM05D003215 ORTHO05D003735 2.9e-55 219.2 187 54.0
FAN11G0613 Fragaria x ananassa HOM05D003215 ORTHO05D003735 2.9e-55 219.2 187 54.0
FAN16G3289 Fragaria x ananassa HOM05D003215 ORTHO05D003735 2.9e-55 219.2 187 54.0
Migut.D01937 Erythranthe guttata HOM05D003215 ORTHO05D003735 3.8e-55 218.8 201 52.2
vmacro10400 Vaccinium macrocarpon HOM05D003215 ORTHO05D003735 3.8e-55 218.8 194 53.6
Duzib168G1098 Durio zibethinus HOM05D003215 ORTHO05D003735 1.1e-54 217.2 197 53.3
Nn7g37196 Nelumbo nucifera HOM05D003215 ORTHO05D003735 1.9e-54 216.5 201 50.7
Cfa013261 Carpinus fangiana HOM05D003215 ORTHO05D003735 2.5e-54 216.1 204 50.5
FAN21G3495 Fragaria x ananassa HOM05D003215 ORTHO05D003735 2.5e-54 216.1 187 52.9
AUR62030249 Chenopodium quinoa HOM05D003215 ORTHO05D003735 3.2e-54 215.7 201 50.2
HanXRQChr10g0309901 Helianthus annuus HOM05D003215 ORTHO05D003735 3.2e-54 215.7 202 51.5
Prupe.6G106700 Prunus persica HOM05D003215 ORTHO05D003735 3.2e-54 215.7 207 53.1
EL10As2g23156 Beta vulgaris HOM05D003215 ORTHO05D003735 4.2e-54 215.3 193 51.8
Lsat_1_v5_gn_7_104201 Lactuca sativa HOM05D003215 ORTHO05D003735 4.2e-54 215.3 203 51.2
Manes.04G016500 Manihot esculenta HOM05D003215 ORTHO05D003735 5.5e-54 214.9 202 52.5
Haze_21721 Corylus avellana HOM05D003215 ORTHO05D003735 7.2e-54 214.5 204 50.0
PGR083G2356 Punica granatum HOM05D003215 ORTHO05D003735 7.2e-54 214.5 201 52.2
DCAR_004337 Daucus carota HOM05D003215 ORTHO05D003735 9.3e-54 214.2 201 52.2
DCAR_024215 Daucus carota HOM05D003215 ORTHO05D003735 9.3e-54 214.2 201 52.2
Potri.003G168900 Populus trichocarpa HOM05D003215 ORTHO05D003735 9.3e-54 214.2 201 50.7
Sabra03G0123800 Salix brachista HOM05D003215 ORTHO05D003735 9.3e-54 214.2 201 51.2
TWI31G0331 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 9.3e-54 214.2 198 52.5
AUR62027593 Chenopodium quinoa HOM05D003215 ORTHO05D003735 2.1e-53 213.0 201 49.8
DCAR_024216 Daucus carota HOM05D003215 ORTHO05D003735 2.1e-53 213.0 201 51.7
TWI31G0413 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 2.1e-53 213.0 198 51.5
EL10Ac1g02277 Beta vulgaris HOM05D003215 ORTHO05D003735 2.7e-53 212.6 185 53.0
BcaB06g27584 Brassica carinata HOM05D003215 ORTHO05D003735 2.7e-53 212.6 192 51.6
BcaC02g08984 Brassica carinata HOM05D003215 ORTHO05D003735 2.7e-53 212.6 201 49.8
BolC4t26400H Brassica oleracea HOM05D003215 ORTHO05D003735 2.7e-53 212.6 201 49.8
DCAR_008318 Daucus carota HOM05D003215 ORTHO05D003735 2.7e-53 212.6 198 52.0
ECA236G3716 Erigeron canadensis HOM05D003215 ORTHO05D003735 2.7e-53 212.6 201 50.2
Sp7g00890 Schrenkiella parvula HOM05D003215 ORTHO05D003735 2.7e-53 212.6 199 49.7
A04p14060 Brassica napus HOM05D003215 ORTHO05D003735 6.1e-53 211.5 200 50.5
BraA04t17067Z Brassica rapa HOM05D003215 ORTHO05D003735 6.1e-53 211.5 200 50.5
Glyma.13G128500 Glycine max HOM05D003215 ORTHO05D003735 7.9e-53 211.1 202 51.0
TWI18G1003 Tripterygium wilfordii HOM05D003215 ORTHO05D003735 7.9e-53 211.1 193 52.8
ECA233G3624 Erigeron canadensis HOM05D003215 ORTHO05D003735 1.3e-52 210.3 201 49.8
Gorai.013G268300 Gossypium raimondii HOM05D003215 ORTHO05D003735 5.1e-52 208.4 198 52.0
Gohir.A13G231900 Gossypium hirsutum HOM05D003215 ORTHO05D003735 6.7e-52 208.0 198 52.0
PSO210G4587 Papaver somniferum HOM05D003215 ORTHO05D003735 8.7e-52 207.6 184 53.8
Atru.chr3.3572 Acer truncatum HOM05D003215 ORTHO05D003735 2.5e-51 206.1 193 50.3
Lj1g0005602 Lotus japonicus HOM05D003215 ORTHO05D003735 2.5e-51 206.1 202 48.5
Gohir.D13G237500 Gossypium hirsutum HOM05D003215 ORTHO05D003735 4.3e-51 205.3 198 51.5
LjContig00081g0004985 Lotus japonicus HOM05D003215 ORTHO05D003735 4.3e-51 205.3 202 48.0
Sc24g0002070 Simmondsia chinensis HOM05D003215 ORTHO05D003735 4.3e-51 205.3 195 52.3
Thhalv10027663m.g Eutrema salsugineum HOM05D003215 ORTHO05D003735 5.7e-51 204.9 199 48.2
THA.LOC104815051 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 2.8e-50 202.6 194 49.5
THA.LOC104816721 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 2.8e-50 202.6 194 49.5
Eucgr.H02514 Eucalyptus grandis HOM05D003215 ORTHO05D003735 3.7e-50 202.2 201 49.8
AT5G41020 Arabidopsis thaliana HOM05D003215 ORTHO05D003735 6.3e-50 201.4 194 47.9
BcaNung03841 Brassica carinata HOM05D003215 ORTHO05D003735 6.3e-50 201.4 198 51.5
PSO210G0114 Papaver somniferum HOM05D003215 ORTHO05D003735 6.3e-50 201.4 183 53.0
BcaC05g28060 Brassica carinata HOM05D003215 ORTHO05D003735 1.4e-49 200.3 173 53.2
BolC5t32818H Brassica oleracea HOM05D003215 ORTHO05D003735 1.4e-49 200.3 173 53.2
CANSAT54G0322 Cannabis sativa HOM05D003215 ORTHO05D003735 1.4e-49 200.3 193 49.2
Lalb_Chr01g0022221 Lupinus albus HOM05D003215 ORTHO05D003735 1.4e-49 200.3 199 49.7
C05p40730 Brassica napus HOM05D003215 ORTHO05D003735 3.1e-49 199.1 173 53.2
THA.LOC104815151 Tarenaya hassleriana HOM05D003215 ORTHO05D003735 3.1e-49 199.1 194 49.0
AL7G48530 Arabidopsis lyrata HOM05D003215 ORTHO05D003735 5.3e-49 198.4 194 46.9
MD04G1037700 Malus domestica HOM05D003215 ORTHO05D003735 5.3e-49 198.4 200 52.5
Atru.chr3.3575 Acer truncatum HOM05D003215 ORTHO05D003735 1.2e-48 197.2 198 49.0
Carub.0007s3447 Capsella rubella HOM05D003215 ORTHO05D003735 1.5e-48 196.8 201 44.8
MBI05_g27786_MAGBIO Magnolia biondii HOM05D003215 ORTHO05D003735 1.5e-48 196.8 198 49.0
Phvul.007G154900 Phaseolus vulgaris HOM05D003215 ORTHO05D003735 4.5e-48 195.3 199 49.2
CDE11G0705 Ceratophyllum demersum HOM05D003215 ORTHO05D003735 1.0e-47 194.1 184 51.6
Aa31LG9G750 Aethionema arabicum HOM05D003215 ORTHO05D003735 1.3e-47 193.7 200 46.5
PSO675G7906 Papaver somniferum HOM05D003215 ORTHO05D003735 1.7e-47 193.4 188 50.0
Atru.chr3.3574 Acer truncatum HOM05D003215 ORTHO05D003735 2.2e-47 193.0 201 47.8
Zm00001eb172100 Zea mays HOM05D003215 ORTHO05D003735 2.9e-47 192.6 201 46.8
BcaC09g51256 Brassica carinata HOM05D003215 ORTHO05D003735 6.5e-47 191.4 199 49.2
Aqoxy2G04188 Aquilegia oxysepala HOM05D003215 ORTHO05D003735 8.5e-47 191.0 182 49.5
Aqoxy4G00232 Aquilegia oxysepala HOM05D003215 ORTHO05D003735 8.5e-47 191.0 182 49.5
Aqoxy6G03074 Aquilegia oxysepala HOM05D003215 ORTHO05D003735 8.5e-47 191.0 182 49.5
RcHm_v2.0_Chr7g0227601 Rosa chinensis HOM05D003215 ORTHO05D003735 1.1e-46 190.7 154 55.2
Aa31LG9G1040 Aethionema arabicum HOM05D003215 ORTHO05D003735 1.4e-46 190.3 197 46.7
PSO170G2126 Papaver somniferum HOM05D003215 ORTHO05D003735 1.4e-46 190.3 185 51.9
CARHR213350 Cardamine hirsuta HOM05D003215 ORTHO05D003735 1.9e-46 189.9 185 46.5
PSO210G2801 Papaver somniferum HOM05D003215 ORTHO05D003735 2.5e-46 189.5 185 50.3
PSO210G2437 Papaver somniferum HOM05D003215 ORTHO05D003735 3.2e-46 189.1 185 50.3
SHI08388 Sapria himalayana HOM05D003215 ORTHO05D003735 4.2e-46 188.7 203 45.8
Ca_14134_v3 Cicer arietinum L. HOM05D003215 ORTHO05D003735 9.4e-46 187.6 183 50.3
PSO210G4537 Papaver somniferum HOM05D003215 ORTHO05D003735 9.4e-46 187.6 185 49.7
arahy.Tifrunner.gnm1.ann1.7W7N8S Arachis hypogaea HOM05D003215 ORTHO05D003735 1.0e-44 184.1 202 47.5
Medtr8g077990 Medicago truncatula HOM05D003215 ORTHO05D003735 1.0e-44 184.1 186 50.0
Psat4g091440 Pisum sativum HOM05D003215 ORTHO05D003735 1.0e-44 184.1 186 51.1
Psat1g024480 Pisum sativum HOM05D003215 ORTHO05D003735 1.4e-44 183.7 202 47.0
Lj3g0014709 Lotus japonicus HOM05D003215 ORTHO05D003735 1.8e-44 183.3 202 46.0
TPR.G16275 Trifolium pratense HOM05D003215 ORTHO05D003735 5.1e-44 181.8 202 45.0
Aa31LG9G1030 Aethionema arabicum HOM05D003215 ORTHO05D003735 2.5e-43 179.5 198 48.0
HPP92_007494 Vanilla planifolia HOM05D003215 ORTHO05D003735 1.2e-40 170.6 185 44.9
Sed0019703 Sechium edule HOM05D003215 ORTHO05D003735 3.8e-39 165.6 193 46.1
PGSC0003DMG400015272 Solanum tuberosum HOM05D003215 ORTHO05D003735 5.5e-38 161.8 120 60.0
Peaxi162Scf25743g00024 Petunia axillaris HOM05D003215 ORTHO05D003735 6.3e-34 148.3 155 49.0
Peaxi162Scf25743g00028 Petunia axillaris HOM05D003215 ORTHO05D003735 9.1e-33 144.4 155 47.1
Haze_25499 Corylus avellana HOM05D003215 ORTHO05D003735 1.2e-32 144.1 201 39.8
C04p48090 Brassica napus HOM05D003215 ORTHO05D003735 5.9e-32 141.7 134 48.5
EL10Ac6g13885 Beta vulgaris HOM05D003215 ORTHO05D003735 2.9e-31 139.4 193 39.9
Peaxi162Scf00102g01055 Petunia axillaris HOM05D003215 ORTHO05D003735 3.8e-31 139.0 128 53.1
BolC1t01455H Brassica oleracea HOM05D003215 ORTHO05D003735 9.1e-25 117.9 177 39.5
C01p15060 Brassica napus HOM05D003215 ORTHO05D003735 1.0e-23 114.4 177 39.0
Peaxi162Scf00413g00068 Petunia axillaris HOM05D003215 ORTHO05D003735 3.2e-22 109.4 96 58.3
RcHm_v2.0_Chr7g0222761 Rosa chinensis HOM05D003215 ORTHO05D003735 4.7e-21 105.5 79 59.5
TPR.G20272 Trifolium pratense HOM05D003215 ORTHO05D003735 8.0e-21 104.8 204 32.4
PSO357G0671 Papaver somniferum HOM05D003215 ORTHO05D003735 1.0e-20 104.4 114 45.6
Pp3c4_2120 Physcomitrium patens HOM05D003215 ORTHO05D003735 8.8e-20 101.3 182 32.4
AagrBONN_evm.TU.Sc2ySwM_344.2899 Anthoceros agrestis HOM05D003215 ORTHO05D003735 3.4e-19 99.4 181 32.6
TPR.G12921 Trifolium pratense HOM05D003215 ORTHO05D003735 7.2e-14 81.6 168 31.0
PRCOL_00005270 Prasinoderma coloniale HOM05D003215 ORTHO05D003735 1.6e-13 80.5 186 29.6
MCO03G213 Micromonas commoda HOM05D003215 ORTHO05D003735 2.7e-13 79.7 160 32.5
Peaxi162Scf41047g00002 Petunia axillaris HOM05D003215 ORTHO05D003735 8.0e-13 78.2 83 45.8
Medtr1g076600 Medicago truncatula HOM05D003215 ORTHO05D003735 2.0e-11 73.6 52 61.5
Peaxi162Scf25743g00012 Petunia axillaris HOM05D003215 ORTHO05D003735 5.7e-11 72.0 54 61.1
Peaxi162Scf25743g00022 Petunia axillaris HOM05D003215 ORTHO05D003735 4.9e-10 68.9 56 53.6
Peaxi162Scf25743g00029 Petunia axillaris HOM05D003215 ORTHO05D003735 4.9e-10 68.9 56 53.6
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 1.2e-08 64.3 68 42.6
Medtr7g029435 Medicago truncatula HOM05D003215 ORTHO05D003735 3.5e-08 62.8 59 49.2
Peaxi162Scf00102g01056 Petunia axillaris HOM05D003215 ORTHO05D003735 3.5e-08 62.8 40 65.0
BcaC09g51258 Brassica carinata HOM05D003215 ORTHO05D003735 5.0e-07 58.9 59 45.8
Peaxi162Scf00102g01054 Petunia axillaris HOM05D003215 ORTHO05D003735 5.0e-07 58.9 88 40.9
SEGI_41560 Sequoiadendron giganteum HOM05D003215 ORTHO05D003735 5.0e-07 58.9 79 43.0
Phvul.009G106700 Phaseolus vulgaris HOM05D000119 ORTHO05D000054 1.9e-06 57.0 153 30.1
VMungo1309G2692 Vigna mungo HOM05D000119 ORTHO05D000054 2.5e-06 56.6 153 30.1
Peaxi162Scf00102g01058 Petunia axillaris HOM05D003215 ORTHO05D003735 7.3e-06 55.1 45 55.6
Glyma.04G080600 Glycine max HOM05D000119 ORTHO05D000054 9.5e-06 54.7 153 29.4
Glyma.06G082300 Glycine max HOM05D000119 ORTHO05D000054 9.5e-06 54.7 153 29.4
Nn3g18071 Nelumbo nucifera HOM05D000119 ORTHO05D000054 9.5e-06 54.7 153 26.8


User provided reference genes

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