Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 0.0e+00 1124.4 574 100.0
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 1.4e-105 387.9 570 45.1
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.3e-87 328.2 624 39.9
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 4.6e-85 319.7 630 39.4
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 4.6e-69 266.5 622 36.0
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 3.3e-67 260.4 579 37.3
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.0e-65 253.4 610 35.2
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 8.1e-58 229.2 621 32.4
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.1e-57 228.8 595 34.5
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.1e-51 208.8 638 31.7
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 3.3e-51 207.2 523 35.4
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 7.4e-51 206.1 567 32.6
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.4e-49 201.8 595 32.8
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 1.4e-49 201.8 586 32.3
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 1.8e-49 201.4 588 32.1
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.8e-49 201.4 634 31.2
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.4e-49 201.1 629 31.3
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.0e-48 198.0 588 32.3
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 3.4e-48 197.2 561 32.8
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-46 192.2 413 34.1
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.1e-46 192.2 630 31.1
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 7.1e-46 189.5 582 32.3
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 9.3e-46 189.1 622 29.6
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 4.6e-45 186.8 628 30.1
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 2.3e-44 184.5 619 31.0
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 6.7e-44 183.0 625 30.9
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 1.4e-41 175.3 620 29.5
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.5e-40 171.8 640 28.9
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 3.4e-40 170.6 618 29.3
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 4.5e-40 170.2 556 30.9
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.0e-39 169.1 611 28.6
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 8.5e-39 166.0 470 33.2
SGA_v2.0_scaffold92G28233 Striga asiatica HOM05D007378 ORTHO05D007577 1.1e-38 165.6 584 30.3
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 9.3e-38 162.5 534 32.2
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.6e-37 161.8 671 28.6
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.7e-36 156.4 665 28.0
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 3.7e-34 150.6 540 29.1
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.1e-33 147.1 628 28.8
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 3.4e-32 144.1 587 28.4
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 1.7e-31 141.7 604 28.3
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 2.9e-31 141.0 353 34.0
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.8e-31 140.6 519 29.5
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 8.5e-31 139.4 647 27.2
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 1.1e-30 139.0 672 26.5
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 1.4e-30 138.7 645 27.4
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 1.2e-29 135.6 614 29.0
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.6e-29 135.2 646 28.5
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 1.8e-28 131.7 625 27.5
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 3.0e-28 131.0 627 27.3
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.0e-28 131.0 674 26.6
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 9.7e-27 125.9 595 28.2
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 6.3e-26 123.2 608 27.1
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 5.3e-25 120.2 624 25.8
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.2e-24 119.0 668 26.3
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 2.0e-24 118.2 571 26.3
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.3e-23 115.5 610 28.2
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 2.2e-23 114.8 614 26.7
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 5.0e-23 113.6 599 26.5
SGA_v2.0_scaffold11G05915 Striga asiatica HOM05D007378 ORTHO05D007577 5.0e-23 113.6 573 28.4
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 6.5e-23 113.2 579 26.4
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.1e-22 112.5 457 29.1
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 1.9e-22 111.7 596 25.5
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 2.5e-22 111.3 612 27.1
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 3.2e-22 110.9 608 27.3
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 3.6e-21 107.5 539 27.1
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 8.0e-21 106.3 623 25.0
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 1.0e-20 105.9 615 27.5
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 1.4e-20 105.5 569 27.4
vmacro04350 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.8e-20 105.1 256 34.8
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.3e-20 104.8 556 27.3
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 1.5e-19 102.1 634 25.9
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 7.4e-19 99.8 551 25.6
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 7.4e-19 99.8 592 27.2
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.7e-18 98.6 618 27.0
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 2.8e-18 97.8 517 26.5
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 3.7e-18 97.4 591 24.4
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 4.8e-18 97.1 615 26.3
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 2.6e-16 91.3 617 25.1
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 4.5e-16 90.5 409 28.9
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 5.5e-14 83.6 575 25.2
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 7.2e-14 83.2 584 23.3
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 1.0e-12 79.3 582 23.2
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 2.3e-12 78.2 546 24.5
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 6.7e-12 76.6 562 23.8
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 8.8e-12 76.3 486 25.1
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 2.2e-10 71.6 604 24.8
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 3.7e-10 70.9 553 24.2
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 6.3e-10 70.1 555 24.9
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 4.1e-09 67.4 581 22.5
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 4.1e-09 67.4 581 24.8
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 9.1e-09 66.2 588 25.5
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.2e-08 65.9 567 24.3
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 1.6e-08 65.5 571 25.2
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 2.2e-07 61.6 456 25.9
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 3.8e-07 60.8 561 24.1
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 8.5e-07 59.7 405 24.4
A07p41260 Brassica napus HOM05D010473 ORTHO05D007577 1.9e-06 58.5 261 29.1
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 4.2e-06 57.4 526 24.3


User provided reference genes

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