Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 3.0e-196 688.3 350 100.0
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 2.3e-148 529.3 348 78.4
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 8.2e-146 520.8 341 77.1
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 9.1e-145 517.3 341 77.4
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 4.5e-144 515.0 339 78.2
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 3.8e-143 511.9 351 76.4
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 3.8e-143 511.9 342 77.8
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 1.5e-142 510.0 343 77.6
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 2.8e-138 495.7 343 76.1
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 3.8e-135 485.3 358 73.2
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 6.5e-135 484.6 340 74.7
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 3.3e-134 482.3 347 73.8
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 8.0e-133 477.6 347 72.0
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 8.0e-133 477.6 353 69.1
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 1.8e-132 476.5 344 73.5
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 3.0e-132 475.7 350 71.7
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 5.2e-132 474.9 350 71.4
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 3.4e-131 472.2 351 72.1
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 2.2e-130 469.5 353 72.2
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 8.3e-130 467.6 348 70.1
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 1.4e-129 466.8 352 71.0
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 3.5e-128 462.2 341 72.1
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 3.5e-128 462.2 344 71.5
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 5.9e-128 461.5 343 73.5
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 1.0e-127 460.7 336 71.4
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.0e-127 460.7 349 69.6
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.3e-127 460.3 351 68.9
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 1.7e-127 459.9 339 70.5
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 3.8e-127 458.8 353 71.4
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 6.6e-127 458.0 341 70.7
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 8.6e-127 457.6 341 70.1
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.5e-126 456.8 344 70.9
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 1.5e-126 456.8 344 70.9
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 1.9e-126 456.4 341 71.3
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 3.3e-126 455.7 349 71.1
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 5.6e-126 454.9 341 69.8
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 7.3e-126 454.5 333 73.3
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 9.5e-126 454.1 296 78.0
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 2.1e-125 453.0 349 69.3
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 6.1e-125 451.4 447 57.9
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 8.0e-125 451.1 348 69.3
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 1.0e-124 450.7 341 71.0
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 1.4e-124 450.3 298 76.8
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 2.3e-124 449.5 327 71.6
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 2.3e-124 449.5 342 67.3
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.2e-124 448.4 348 69.0
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 2.6e-123 446.0 305 74.4
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.2e-122 443.0 349 67.9
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.2e-122 443.0 361 65.7
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 2.2e-122 443.0 351 68.4
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 2.2e-122 443.0 337 69.7
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 1.9e-121 439.9 310 74.8
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 3.2e-121 439.1 351 68.1
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 4.1e-121 438.7 328 71.3
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 2.0e-120 436.4 302 74.8
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 1.3e-119 433.7 323 69.7
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 1.7e-119 433.3 327 68.2
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 2.3e-119 433.0 324 69.4
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 2.3e-119 433.0 347 65.4
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 3.9e-119 432.2 326 67.8
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 5.0e-119 431.8 382 62.3
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 2.5e-118 429.5 342 67.0
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 3.3e-118 429.1 296 72.3
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 4.3e-118 428.7 347 67.4
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 4.3e-118 428.7 334 66.8
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 2.1e-117 426.4 318 69.2
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 2.3e-116 422.9 255 82.7
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 3.1e-116 422.5 325 66.8
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 3.1e-116 422.5 325 66.8
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 4.0e-116 422.2 324 68.2
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 4.0e-116 422.2 265 77.0
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 5.2e-116 421.8 343 65.3
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 6.8e-116 421.4 324 67.3
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 6.8e-116 421.4 324 67.3
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 8.9e-116 421.0 329 67.2
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 5.8e-115 418.3 293 71.3
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 1.7e-114 416.8 344 65.7
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 3.7e-114 415.6 339 66.4
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 8.3e-114 414.5 331 68.3
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 1.1e-113 414.1 332 66.9
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 2.4e-113 412.9 353 65.4
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 3.2e-113 412.5 340 63.5
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 3.5e-112 409.1 347 62.8
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 1.1e-110 404.1 299 69.2
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 3.3e-110 402.5 314 66.2
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 4.3e-110 402.1 296 69.6
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 1.6e-109 400.2 331 65.9
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 1.4e-108 397.1 344 62.8
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 6.4e-106 388.3 310 67.1
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 3.2e-105 386.0 229 80.8
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 8.6e-103 377.9 313 66.1
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 5.8e-99 365.2 319 63.9
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 2.1e-96 356.7 329 55.6
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 8.1e-93 344.7 279 65.6
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 2.4e-84 316.6 173 87.9
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 1.7e-82 310.5 342 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 1.9e-81 307.0 331 50.5
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 7.1e-81 305.1 255 61.2
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 1.2e-80 304.3 329 49.8
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 8.4e-74 281.6 333 47.4
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 1.9e-73 280.4 163 82.2
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.0e-67 260.4 187 68.4
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.0e-63 248.1 144 82.6
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 1.3e-61 241.1 224 50.4
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 9.7e-54 214.9 132 81.1
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 9.7e-54 214.9 126 81.7
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 9.7e-54 214.9 126 81.7
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 1.1e-52 211.5 192 58.3
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 3.2e-49 199.9 132 72.0
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 2.1e-48 197.2 361 34.9
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla HOM05D006315 ORTHO05D008052 1.7e-42 177.6 160 66.2
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 4.4e-38 162.9 307 34.5
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 2.5e-33 147.1 238 37.8
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 6.1e-32 142.5 107 72.0
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 8.0e-24 115.5 83 68.7
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 3.0e-23 113.6 202 39.6
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 1.6e-19 101.3 92 58.7
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 3.5e-19 100.1 53 86.8
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 4.4e-14 83.2 55 67.3
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 3.7e-13 80.1 130 39.2
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 9.2e-12 75.5 130 37.7
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 4.5e-11 73.2 116 43.1
EL10Ac4g09000 Beta vulgaris HOM05D006315 ORTHO05D008052 1.9e-09 67.8 38 84.2
CSS0026722 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D009015 2.8e-08 63.9 263 27.0
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 1.0e-07 62.0 39 71.8
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 1.0e-07 62.0 39 71.8
CSS0029501 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D009015 2.3e-07 60.8 253 27.3
HPP92_002889 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.2e-07 59.7 34 76.5


User provided reference genes

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