Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020711.1 Olea europaea HOM05D005368 ORTHO05D006417 2.7e-97 358.6 172 100.0
Oeu046129.2 Olea europaea HOM05D005368 ORTHO05D006417 1.3e-27 127.1 153 49.0
MSTRG.27675 Avicennia marina HOM05D005368 ORTHO05D006417 1.9e-23 113.2 149 45.0
MSTRG.20040 Avicennia marina HOM05D005368 ORTHO05D006417 1.3e-22 110.5 149 44.3
Cc02_g16910 Coffea canephora HOM05D005368 ORTHO05D006417 4.8e-22 108.6 148 43.9
Potri.009G124600 Populus trichocarpa HOM05D005368 ORTHO05D006417 1.4e-21 107.1 154 44.2
Hund00179 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.8e-21 106.7 154 40.9
Hund00187 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.8e-21 106.7 154 40.9
Migut.N01277 Erythranthe guttata HOM05D005368 ORTHO05D006417 3.1e-21 105.9 140 42.9
EL10Ac9g21636 Beta vulgaris HOM05D005368 ORTHO05D006417 4.1e-21 105.5 148 41.2
PGR042G2956 Punica granatum HOM05D005368 ORTHO05D006417 5.3e-21 105.1 146 44.5
SGA_v2.0_scaffold207G41877 Striga asiatica HOM05D005368 ORTHO05D006417 5.3e-21 105.1 148 41.2
Ah.01g018810 Amaranthus hybridus HOM05D005368 ORTHO05D006417 6.9e-21 104.8 140 42.1
Nitab4.5_0005266g0100 Nicotiana tabacum HOM05D005368 ORTHO05D006417 1.2e-20 104.0 153 40.5
Hund06283 Selenicereus undatus HOM05D005368 ORTHO05D006417 1.2e-20 104.0 154 39.0
Ah.01g006460 Amaranthus hybridus HOM05D005368 ORTHO05D006417 3.4e-20 102.4 140 40.7
AUR62010388 Chenopodium quinoa HOM05D005368 ORTHO05D006417 3.4e-20 102.4 140 40.7
AUR62016830 Chenopodium quinoa HOM05D005368 ORTHO05D006417 3.4e-20 102.4 140 40.7
Nitab4.5_0001317g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 3.4e-20 102.4 153 41.2
ECA246G1492 Erigeron canadensis HOM05D005368 ORTHO05D006417 4.5e-20 102.1 146 43.8
HanXRQChr15g0478311 Helianthus annuus HOM05D005368 ORTHO05D006417 4.5e-20 102.1 149 44.3
ClCG11G003860 Citrullus lanatus HOM05D005368 ORTHO05D006417 1.0e-19 100.9 150 42.0
Nn5g29240 Nelumbo nucifera HOM05D005368 ORTHO05D006417 1.0e-19 100.9 146 43.2
CAN.G170.100 Capsicum annuum HOM05D005368 ORTHO05D006417 1.3e-19 100.5 153 40.5
CiPaw.06G128000 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.3e-19 100.5 155 42.6
Glyma.04G008100 Glycine max HOM05D005368 ORTHO05D006417 1.3e-19 100.5 149 41.6
Gohir.A12G041100 Gossypium hirsutum HOM05D005368 ORTHO05D006417 1.3e-19 100.5 146 42.5
Manes.04G083400 Manihot esculenta HOM05D005368 ORTHO05D006417 1.3e-19 100.5 151 41.1
CiPaw.05G073300 Carya illinoinensis HOM05D005368 ORTHO05D006417 1.7e-19 100.1 155 42.6
Lsat_1_v5_gn_3_44180 Lactuca sativa HOM05D005368 ORTHO05D006417 1.7e-19 100.1 137 44.5
CSS0039837 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 2.2e-19 99.8 141 42.6
CANSAT11G1177 Cannabis sativa HOM05D005368 ORTHO05D006417 2.2e-19 99.8 147 42.2
Duzib052G0771 Durio zibethinus HOM05D005368 ORTHO05D006417 2.2e-19 99.8 146 43.2
Lalb_Chr11g0061301 Lupinus albus HOM05D005368 ORTHO05D006417 2.2e-19 99.8 139 41.7
Potri.004G163000 Populus trichocarpa HOM05D005368 ORTHO05D006417 2.2e-19 99.8 153 41.8
GSVIVG01024171001 Vitis vinifera HOM05D005368 ORTHO05D006417 2.2e-19 99.8 148 42.6
Gohir.D02G220600 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.9e-19 99.4 146 42.5
Cfa005111 Carpinus fangiana HOM05D005368 ORTHO05D006417 3.8e-19 99.0 155 41.9
Glyma.06G007900 Glycine max HOM05D005368 ORTHO05D006417 3.8e-19 99.0 149 40.9
Gohir.D12G031300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 3.8e-19 99.0 146 41.8
Gorai.008G032000 Gossypium raimondii HOM05D005368 ORTHO05D006417 3.8e-19 99.0 146 41.8
Solyc01g110390.2 Solanum lycopersicum HOM05D005368 ORTHO05D006417 3.8e-19 99.0 153 39.9
Thecc.02G075100 Theobroma cacao HOM05D005368 ORTHO05D006417 3.8e-19 99.0 146 42.5
Nitab4.5_0010630g0030 Nicotiana tabacum HOM05D005368 ORTHO05D006417 5.0e-19 98.6 137 42.3
Sc08g0000900 Simmondsia chinensis HOM05D005368 ORTHO05D006417 5.0e-19 98.6 139 40.3
CSS0032904 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 6.5e-19 98.2 141 41.8
COL.COLO4_26045 Corchorus olitorius HOM05D005368 ORTHO05D006417 6.5e-19 98.2 146 41.8
Gohir.A03G199300 Gossypium hirsutum HOM05D005368 ORTHO05D006417 6.5e-19 98.2 146 41.8
Gorai.005G248500 Gossypium raimondii HOM05D005368 ORTHO05D006417 6.5e-19 98.2 146 41.8
Lalb_Chr08g0246711 Lupinus albus HOM05D005368 ORTHO05D006417 6.5e-19 98.2 139 41.0
Manes.11G081900 Manihot esculenta HOM05D005368 ORTHO05D006417 6.5e-19 98.2 151 41.1
Peaxi162Scf00016g00038 Petunia axillaris HOM05D005368 ORTHO05D006417 6.5e-19 98.2 150 38.7
Ca_15334_v3 Cicer arietinum L. HOM05D005368 ORTHO05D006417 8.5e-19 97.8 151 38.4
FvH4_2g10430 Fragaria vesca HOM05D005368 ORTHO05D006417 8.5e-19 97.8 149 40.9
FAN20G0372 Fragaria x ananassa HOM05D005368 ORTHO05D006417 8.5e-19 97.8 149 40.9
FAN24G2358 Fragaria x ananassa HOM05D005368 ORTHO05D006417 8.5e-19 97.8 149 40.9
FAN27G2088 Fragaria x ananassa HOM05D005368 ORTHO05D006417 8.5e-19 97.8 149 40.9
Ciclev10029601m.g Citrus clementina HOM05D005368 ORTHO05D006417 1.4e-18 97.1 140 39.3
Duzib132G1204 Durio zibethinus HOM05D005368 ORTHO05D006417 1.4e-18 97.1 146 40.4
MD00G1086200 Malus domestica HOM05D005368 ORTHO05D006417 1.4e-18 97.1 149 40.3
RcHm_v2.0_Chr6g0267931 Rosa chinensis HOM05D005368 ORTHO05D006417 1.4e-18 97.1 146 40.4
Sopen01g052540 Solanum pennellii HOM05D005368 ORTHO05D006417 1.4e-18 97.1 63 68.3
VMungo1309G2922 Vigna mungo HOM05D005368 ORTHO05D006417 1.4e-18 97.1 146 41.1
BolC1t00400H Brassica oleracea HOM05D005368 ORTHO05D006417 1.9e-18 96.7 148 38.5
Psat5g003920 Pisum sativum HOM05D005368 ORTHO05D006417 1.9e-18 96.7 154 38.3
BcaNung07080 Brassica carinata HOM05D005368 ORTHO05D006417 2.5e-18 96.3 152 38.8
A03p63090 Brassica napus HOM05D005368 ORTHO05D006417 2.5e-18 96.3 152 38.8
BolC7t46501H Brassica oleracea HOM05D005368 ORTHO05D006417 2.5e-18 96.3 152 38.8
BraA03t15384Z Brassica rapa HOM05D005368 ORTHO05D006417 2.5e-18 96.3 152 38.8
Haze_02245 Corylus avellana HOM05D005368 ORTHO05D006417 2.5e-18 96.3 155 41.3
Sed0023703 Sechium edule HOM05D005368 ORTHO05D006417 2.5e-18 96.3 146 40.4
TAR376G0297 Trochodendron aralioides HOM05D005368 ORTHO05D006417 2.5e-18 96.3 149 41.6
Haze_02248 Corylus avellana HOM05D005368 ORTHO05D006417 3.2e-18 95.9 149 40.9
MD10G1063100 Malus domestica HOM05D005368 ORTHO05D006417 3.2e-18 95.9 146 39.7
AL7G16500 Arabidopsis lyrata HOM05D005368 ORTHO05D006417 4.2e-18 95.5 141 39.7
AT4G34700 Arabidopsis thaliana HOM05D005368 ORTHO05D006417 4.2e-18 95.5 141 39.7
Hma1.2p1_0032F.1_g020120 Hydrangea macrophylla HOM05D005368 ORTHO05D006417 4.2e-18 95.5 145 42.8
Carub.0007s0559 Capsella rubella HOM05D005368 ORTHO05D006417 5.5e-18 95.1 141 40.4
SalBow3G2013 Salvia bowleyana HOM05D005368 ORTHO05D006417 5.5e-18 95.1 145 39.3
Sp7g32480 Schrenkiella parvula HOM05D005368 ORTHO05D006417 5.5e-18 95.1 152 38.8
THA.LOC104819629 Tarenaya hassleriana HOM05D005368 ORTHO05D006417 5.5e-18 95.1 146 39.7
C07p60710 Brassica napus HOM05D005368 ORTHO05D006417 7.2e-18 94.7 152 38.2
FAN15G3179 Fragaria x ananassa HOM05D005368 ORTHO05D006417 7.2e-18 94.7 149 40.3
QL11p046417 Quercus lobata HOM05D005368 ORTHO05D006417 7.2e-18 94.7 154 41.6
TWI31G1415 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 7.2e-18 94.7 149 42.3
BcaB03g11818 Brassica carinata HOM05D005368 ORTHO05D006417 9.4e-18 94.4 152 38.2
A08p16660 Brassica napus HOM05D005368 ORTHO05D006417 9.4e-18 94.4 152 38.2
BraA08t33631Z Brassica rapa HOM05D005368 ORTHO05D006417 9.4e-18 94.4 159 37.7
CARHR243000 Cardamine hirsuta HOM05D005368 ORTHO05D006417 9.4e-18 94.4 141 39.7
TWI79G1074 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 9.4e-18 94.4 149 42.3
Dinv23453 Davidia involucrata HOM05D005368 ORTHO05D006417 1.6e-17 93.6 138 43.5
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 1.6e-17 93.6 63 63.5
MBI18_g13600_MAGBIO Magnolia biondii HOM05D005368 ORTHO05D006417 1.6e-17 93.6 151 39.7
Prupe.8G083900 Prunus persica HOM05D005368 ORTHO05D006417 1.6e-17 93.6 150 39.3
Sed0006755 Sechium edule HOM05D005368 ORTHO05D006417 1.6e-17 93.6 149 38.9
BcaNung00672 Brassica carinata HOM05D005368 ORTHO05D006417 2.1e-17 93.2 152 38.2
BcaNung00675 Brassica carinata HOM05D005368 ORTHO05D006417 2.1e-17 93.2 152 38.2
C01p04120 Brassica napus HOM05D005368 ORTHO05D006417 2.1e-17 93.2 152 38.2
Medtr3g117550 Medicago truncatula HOM05D005368 ORTHO05D006417 2.1e-17 93.2 145 38.6
PSO210G0115 Papaver somniferum HOM05D005368 ORTHO05D006417 2.1e-17 93.2 148 40.5
TPR.G32174 Trifolium pratense HOM05D005368 ORTHO05D006417 2.1e-17 93.2 171 36.3
TWI75G0748 Tripterygium wilfordii HOM05D005368 ORTHO05D006417 2.1e-17 93.2 146 41.8
A01p03810 Brassica napus HOM05D005368 ORTHO05D006417 2.7e-17 92.8 152 37.5
BraA01t00366Z Brassica rapa HOM05D005368 ORTHO05D006417 2.7e-17 92.8 152 37.5
CsaV3_2G015290 Cucumis sativus L. HOM05D005368 ORTHO05D006417 2.7e-17 92.8 149 39.6
Gorai.002G149100 Gossypium raimondii HOM05D005368 ORTHO05D006417 2.7e-17 92.8 64 62.5
PSO170G4570 Papaver somniferum HOM05D005368 ORTHO05D006417 2.7e-17 92.8 148 39.9
HPP92_012929 Vanilla planifolia HOM05D005368 ORTHO05D006417 2.7e-17 92.8 148 37.8
Atru.chr5.3143 Acer truncatum HOM05D005368 ORTHO05D006417 4.7e-17 92.0 150 36.7
Aqoxy5G01478 Aquilegia oxysepala HOM05D005368 ORTHO05D006417 4.7e-17 92.0 148 40.5
BcaC01g00883 Brassica carinata HOM05D005368 ORTHO05D006417 4.7e-17 92.0 154 37.7
Aa31LG2G15810 Aethionema arabicum HOM05D005368 ORTHO05D006417 6.1e-17 91.7 138 38.4
Eucgr.G01730 Eucalyptus grandis HOM05D005368 ORTHO05D006417 6.1e-17 91.7 56 67.9
Lj3g0011506 Lotus japonicus HOM05D005368 ORTHO05D006417 7.9e-17 91.3 149 37.6
Phvul.009G002900 Phaseolus vulgaris HOM05D005368 ORTHO05D006417 7.9e-17 91.3 145 40.7
Gohir.D13G096825 Gossypium hirsutum HOM05D005368 ORTHO05D006417 2.3e-16 89.7 53 67.9
C03p85580 Brassica napus HOM05D005368 ORTHO05D006417 3.9e-16 89.0 135 39.3
MELO3C023357.2 Cucumis melo HOM05D005368 ORTHO05D006417 3.9e-16 89.0 137 39.4
Thhalv10026594m.g Eutrema salsugineum HOM05D005368 ORTHO05D006417 5.1e-16 88.6 58 62.1
HanXRQChr10g0292781 Helianthus annuus HOM05D005368 ORTHO05D006417 1.1e-15 87.4 56 69.6
CDE02G1335 Ceratophyllum demersum HOM05D000240 ORTHO05D001140 5.7e-15 85.1 149 37.6
MD00G1117500 Malus domestica HOM05D005368 ORTHO05D006417 7.4e-15 84.7 146 36.3
unitig_60.g25866 Utricularia gibba HOM05D005368 ORTHO05D006417 7.4e-15 84.7 76 51.3
ATR0149G005 Amborella trichopoda HOM05D005368 ORTHO05D006417 1.3e-14 84.0 143 37.8
CSS0005721 Camellia sinensis var. sinensis HOM05D005368 ORTHO05D006417 1.3e-14 84.0 56 67.9
Zm00001eb227940 Zea mays HOM05D005368 ORTHO05D006417 4.1e-13 79.0 138 35.5
Os06g0714100 Oryza sativa ssp. japonica HOM05D005368 ORTHO05D006417 6.9e-13 78.2 149 34.9
SEGI_21378 Sequoiadendron giganteum HOM05D005368 ORTHO05D006417 2.6e-12 76.3 141 36.9
Pp3c6_19130 Physcomitrium patens HOM05D005368 ORTHO05D006417 4.5e-12 75.5 58 56.9
Actinidia02246 Actinidia chinensis HOM05D005368 ORTHO05D006417 1.1e-10 70.9 44 70.5
Mapoly0002s0197 Marchantia polymorpha HOM05D005368 ORTHO05D006417 2.5e-10 69.7 58 51.7
Nitab4.5_0005932g0060 Nicotiana tabacum HOM05D005368 ORTHO05D006417 3.0e-08 62.8 153 32.7
AagrBONN_evm.TU.Sc2ySwM_368.1500 Anthoceros agrestis HOM05D005368 ORTHO05D006417 6.7e-08 61.6 61 44.3
CDE04G1205 Ceratophyllum demersum HOM05D005368 ORTHO05D006417 1.1e-07 60.8 127 33.9
SMO159G0001 Selaginella moellendorffii HOM05D005368 ORTHO05D006417 3.3e-07 59.3 51 43.1
SMO223G0026 Selaginella moellendorffii HOM05D000032 ORTHO05D004142 2.8e-06 56.2 47 44.7
PGSC0003DMG400005571 Solanum tuberosum HOM05D005368 ORTHO05D006417 3.7e-06 55.8 118 32.2


User provided reference genes

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