Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 4.1e-125 451.4 233 100.0
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 6.6e-67 258.1 199 73.9
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 1.9e-66 256.5 199 72.4
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 3.3e-66 255.8 188 74.5
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 4.8e-65 251.9 197 71.1
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.1e-64 250.8 174 78.7
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 3.1e-64 249.2 175 78.3
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 6.9e-64 248.1 222 65.3
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 9.0e-64 247.7 174 78.2
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 9.0e-64 247.7 174 78.2
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.4e-63 245.7 236 61.0
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 9.9e-63 244.2 175 78.9
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 1.3e-62 243.8 169 78.1
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 2.9e-62 242.7 174 77.0
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.9e-62 242.7 181 74.6
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 3.8e-62 242.3 175 78.9
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 3.8e-62 242.3 172 77.3
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 4.9e-62 241.9 169 78.1
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 6.4e-62 241.5 173 74.6
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.4e-61 239.6 197 70.1
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 4.2e-61 238.8 173 76.9
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 4.2e-61 238.8 175 77.7
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 5.4e-61 238.4 173 78.6
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 7.1e-61 238.0 171 77.8
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 1.2e-60 237.3 191 68.1
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 2.1e-60 236.5 171 77.2
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.1e-60 236.5 157 83.4
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.1e-60 236.5 175 76.0
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 2.7e-60 236.1 164 77.4
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 3.5e-60 235.7 198 69.7
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 3.5e-60 235.7 174 74.1
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 4.6e-60 235.3 174 75.3
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 6.0e-60 235.0 172 77.9
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 7.9e-60 234.6 170 77.6
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 1.0e-59 234.2 173 76.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.3e-59 233.8 173 72.8
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 2.3e-59 233.0 173 71.1
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 2.3e-59 233.0 177 72.9
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 2.3e-59 233.0 173 72.8
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 3.9e-59 232.3 172 74.4
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 8.7e-59 231.1 171 74.9
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 1.1e-58 230.7 176 74.4
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.1e-58 230.7 175 72.0
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 1.9e-58 229.9 174 73.0
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.9e-58 229.9 183 72.1
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.9e-58 229.9 173 76.3
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.9e-58 229.9 172 74.4
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.5e-58 229.6 173 76.3
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 2.5e-58 229.6 172 74.4
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 3.3e-58 229.2 176 72.7
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 3.3e-58 229.2 171 76.6
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 4.3e-58 228.8 173 75.1
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 7.4e-58 228.0 172 75.6
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 7.4e-58 228.0 180 71.1
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 9.6e-58 227.6 171 73.1
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 9.6e-58 227.6 175 71.4
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 2.1e-57 226.5 171 73.7
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 6.2e-57 224.9 175 70.9
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 8.1e-57 224.6 205 63.4
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 8.1e-57 224.6 172 74.4
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 1.1e-56 224.2 175 69.7
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 1.1e-56 224.2 191 67.5
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 1.4e-56 223.8 173 72.8
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.4e-56 223.0 171 73.7
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 2.4e-56 223.0 171 73.7
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 3.1e-56 222.6 171 73.7
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 4.0e-56 222.2 171 73.7
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 6.9e-56 221.5 193 66.8
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 6.9e-56 221.5 170 75.9
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 6.9e-56 221.5 192 65.1
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 9.0e-56 221.1 176 72.2
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.2e-55 220.7 143 83.2
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 1.2e-55 220.7 173 71.1
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 1.5e-55 220.3 170 72.4
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 2.0e-55 219.9 169 72.8
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 3.4e-55 219.2 169 72.8
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 4.5e-55 218.8 168 73.2
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 4.5e-55 218.8 202 60.4
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 9.9e-55 217.6 172 72.1
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 9.9e-55 217.6 171 71.3
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.9e-54 216.1 198 63.6
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.9e-54 216.1 173 67.1
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.4e-53 213.0 170 71.2
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.4e-53 213.0 170 71.2
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 2.4e-53 213.0 197 65.0
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 3.2e-53 212.6 172 68.6
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 7.1e-53 211.5 163 77.3
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 9.3e-53 211.1 176 66.5
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 3.5e-52 209.1 174 69.5
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 3.5e-52 209.1 162 74.1
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 4.6e-52 208.8 179 68.2
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 3.9e-51 205.7 124 86.3
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 2.5e-50 203.0 136 77.2
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 7.4e-50 201.4 122 87.7
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 7.4e-50 201.4 198 61.1
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 9.6e-50 201.1 150 75.3
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.3e-49 200.7 129 82.9
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.3e-49 200.7 129 82.9
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 4.8e-49 198.7 125 83.2
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.8e-48 196.8 150 74.7
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 3.4e-47 192.6 128 79.7
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 5.8e-47 191.8 125 79.2
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 7.6e-47 191.4 168 61.9
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 2.2e-46 189.9 268 47.0
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 1.1e-42 177.6 181 53.0
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 2.0e-39 166.8 135 63.0
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 2.0e-39 166.8 172 54.1
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 2.5e-37 159.8 152 59.9
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 4.6e-36 155.6 153 52.3
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 4.1e-32 142.5 134 55.2
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 1.5e-31 140.6 110 70.9
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.6e-28 130.6 169 55.0
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 3.7e-25 119.4 120 55.8
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.8e-24 117.1 128 50.0
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 4.1e-24 115.9 98 60.2
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 3.8e-22 109.4 153 41.8
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.2e-21 106.3 67 85.1
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 4.2e-21 105.9 89 62.9
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 1.4e-19 100.9 103 58.3
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 3.7e-17 92.8 71 74.6
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 4.4e-10 69.3 149 37.6
Oeu055177.1 Olea europaea HOM05D000375 ORTHO05D000240 5.7e-10 68.9 52 61.5


User provided reference genes

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