Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020615.1 Olea europaea HOM05D004296 ORTHO05D005045 7.9e-146 520.8 337 100.0
Oeu009155.1 Olea europaea HOM05D004296 ORTHO05D005045 8.3e-111 404.4 344 74.1
CSS0030285 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.8e-60 237.3 341 44.0
CSS0003782 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 2.6e-56 223.4 341 42.8
Dinv38945 Davidia involucrata HOM05D004296 ORTHO05D005045 2.6e-56 223.4 345 41.2
SGA_v2.0_scaffold96G28938 Striga asiatica HOM05D004296 ORTHO05D005045 1.4e-54 217.6 337 41.2
MSTRG.11985 Avicennia marina HOM05D004296 ORTHO05D005045 2.5e-54 216.9 340 40.0
SalBow1G8718 Salvia bowleyana HOM05D004296 ORTHO05D005045 9.3e-54 214.9 341 39.0
MSTRG.11987 Avicennia marina HOM05D004296 ORTHO05D005045 1.3e-52 211.1 322 40.1
Cfa013198 Carpinus fangiana HOM05D004296 ORTHO05D005045 3.9e-52 209.5 332 41.9
Hma1.2p1_0896F.1_g234000 Hydrangea macrophylla HOM05D004296 ORTHO05D005045 8.7e-52 208.4 342 39.2
TAR268G0002 Trochodendron aralioides HOM05D004296 ORTHO05D005045 5.7e-51 205.7 340 41.2
Cc10_g03910 Coffea canephora HOM05D004296 ORTHO05D005045 3.7e-50 203.0 374 37.7
Haze_22818 Corylus avellana HOM05D004296 ORTHO05D005045 1.4e-49 201.1 330 39.1
Lj8C228T3 Lonicera japonica HOM05D004296 ORTHO05D005045 2.4e-49 200.3 365 45.8
DCAR_000614 Daucus carota HOM05D004296 ORTHO05D005045 3.1e-49 199.9 336 40.5
Migut.A00767 Erythranthe guttata HOM05D004296 ORTHO05D005045 4.1e-49 199.5 344 38.7
QL12p012797 Quercus lobata HOM05D004296 ORTHO05D005045 4.1e-49 199.5 348 41.1
Rhsim02G0231000 Rhododendron simsii HOM05D004296 ORTHO05D005045 5.3e-49 199.1 349 40.1
CSS0037206 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 1.5e-48 197.6 341 40.8
TAR375G1065 Trochodendron aralioides HOM05D004296 ORTHO05D005045 1.0e-47 194.9 349 38.4
Actinidia02008 Actinidia chinensis HOM05D004296 ORTHO05D005045 1.3e-47 194.5 336 37.5
Lj2A555T5 Lonicera japonica HOM05D004296 ORTHO05D005045 1.3e-47 194.5 385 35.1
Atru.chr9.2192 Acer truncatum HOM05D004296 ORTHO05D005045 2.9e-47 193.4 342 37.1
Lj8A231T11 Lonicera japonica HOM05D004296 ORTHO05D005045 7.2e-46 188.7 389 40.1
CiPaw.08G074700 Carya illinoinensis HOM05D004296 ORTHO05D005045 9.3e-46 188.3 339 43.7
SalBow7G4152 Salvia bowleyana HOM05D004296 ORTHO05D005045 9.3e-46 188.3 194 49.5
TWI18G1338 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 1.5e-43 181.0 353 36.8
FvH4_5g02380 Fragaria vesca HOM05D004296 ORTHO05D005045 1.9e-43 180.6 315 40.0
Nitab4.5_0001615g0200 Nicotiana tabacum HOM05D004296 ORTHO05D005045 2.5e-43 180.3 342 47.1
FAN04G1575 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.3e-43 179.9 315 36.5
Duzib068G1191 Durio zibethinus HOM05D004296 ORTHO05D005045 5.7e-43 179.1 347 36.6
Manes.01G061800 Manihot esculenta HOM05D004296 ORTHO05D005045 9.7e-43 178.3 325 37.2
Peaxi162Scf00119g00828 Petunia axillaris HOM05D004296 ORTHO05D005045 9.7e-43 178.3 344 48.3
Nn1g01503 Nelumbo nucifera HOM05D004296 ORTHO05D005045 2.2e-42 177.2 344 36.9
Gohir.D05G298900 Gossypium hirsutum HOM05D004296 ORTHO05D005045 3.7e-42 176.4 334 35.6
TWI36G1592 Tripterygium wilfordii HOM05D004296 ORTHO05D005045 1.1e-41 174.9 329 35.6
CAN.G774.35 Capsicum annuum HOM05D004296 ORTHO05D005045 1.4e-41 174.5 342 41.5
Thecc.03G278500 Theobroma cacao HOM05D004296 ORTHO05D005045 1.8e-41 174.1 348 35.1
PGSC0003DMG400012342 Solanum tuberosum HOM05D004296 ORTHO05D005045 2.4e-41 173.7 347 46.1
Gorai.009G316100 Gossypium raimondii HOM05D004296 ORTHO05D005045 4.1e-41 172.9 334 35.0
Sopen04g002480 Solanum pennellii HOM05D004296 ORTHO05D005045 4.1e-41 172.9 371 47.4
Gohir.A05G299133 Gossypium hirsutum HOM05D004296 ORTHO05D005045 5.3e-41 172.6 334 35.3
Oeu009158.1 Olea europaea HOM05D004296 ORTHO05D005045 5.3e-41 172.6 174 59.2
RcHm_v2.0_Chr7g0197731 Rosa chinensis HOM05D004296 ORTHO05D005045 5.3e-41 172.6 339 36.0
CSS0027171 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 6.9e-41 172.2 159 57.9
CSS0028138 Camellia sinensis var. sinensis HOM05D004296 ORTHO05D005045 6.9e-41 172.2 159 57.9
FAN07G0166 Fragaria x ananassa HOM05D004296 ORTHO05D005045 6.9e-41 172.2 323 36.2
PGSC0003DMG403005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 9.0e-41 171.8 371 48.8
PGSC0003DMG401005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 5.9e-40 169.1 181 51.4
Nitab4.5_0011683g0020 Nicotiana tabacum HOM05D004296 ORTHO05D005045 7.7e-40 168.7 341 42.2
MBI18_g42175_MAGBIO Magnolia biondii HOM05D004296 ORTHO05D005045 1.0e-39 168.3 334 36.5
Solyc04g007420.4 Solanum lycopersicum HOM05D004296 ORTHO05D005045 8.5e-39 165.2 339 51.0
MD14G1104200 Malus domestica HOM05D004296 ORTHO05D005045 1.1e-38 164.9 202 46.5
Solyc08g081040.3 Solanum lycopersicum HOM05D004296 ORTHO05D005045 1.4e-38 164.5 371 46.9
Prupe.5G099900 Prunus persica HOM05D004296 ORTHO05D005045 3.2e-38 163.3 394 38.1
TPR.G3981 Trifolium pratense HOM05D004296 ORTHO05D005045 3.2e-38 163.3 352 34.1
Cpa.g.sc45.44 Carica papaya HOM05D004296 ORTHO05D005045 5.5e-38 162.5 348 34.8
HanXRQChr03g0086721 Helianthus annuus HOM05D004296 ORTHO05D005045 5.5e-38 162.5 333 35.1
COL.COLO4_34461 Corchorus olitorius HOM05D001502 ORTHO05D002950 9.4e-38 161.8 326 35.6
Ciclev10002111m.g Citrus clementina HOM05D004296 ORTHO05D005045 1.6e-37 161.0 163 50.3
HanXRQChr03g0086731 Helianthus annuus HOM05D004296 ORTHO05D005045 6.1e-37 159.1 322 36.6
unitig_32.g11599 Utricularia gibba HOM05D004296 ORTHO05D005045 6.1e-37 159.1 344 35.2
FAN08G1593 Fragaria x ananassa HOM05D004296 ORTHO05D005045 7.9e-37 158.7 314 38.5
Sc01g0009550 Simmondsia chinensis HOM05D004296 ORTHO05D005045 1.0e-36 158.3 337 33.5
FAN12G3540 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.4e-36 157.9 330 34.8
Peaxi162Scf00014g00082 Petunia axillaris HOM05D004296 ORTHO05D005045 1.8e-36 157.5 346 35.5
AUR62007249 Chenopodium quinoa HOM05D004296 ORTHO05D005045 2.3e-36 157.1 342 42.4
Lsat_1_v5_gn_6_87401 Lactuca sativa HOM05D004296 ORTHO05D005045 3.0e-36 156.8 329 33.7
PSO782G5383 Papaver somniferum HOM05D004296 ORTHO05D005045 3.0e-36 156.8 357 33.1
Eucgr.D01846 Eucalyptus grandis HOM05D004296 ORTHO05D005045 3.9e-36 156.4 356 33.4
Actinidia14560 Actinidia chinensis HOM05D004296 ORTHO05D005045 5.1e-36 156.0 342 36.3
Medtr0768s0010 Medicago truncatula HOM05D004296 ORTHO05D005045 2.0e-35 154.1 339 33.6
Lsat_1_v5_gn_5_92680 Lactuca sativa HOM05D004296 ORTHO05D005045 4.3e-35 152.9 331 34.4
Ah.12g054620 Amaranthus hybridus HOM05D004296 ORTHO05D005045 7.4e-35 152.1 345 39.1
EL10Ac8g19045 Beta vulgaris HOM05D004296 ORTHO05D005045 7.4e-35 152.1 359 34.3
Hund05589 Selenicereus undatus HOM05D004296 ORTHO05D005045 7.4e-35 152.1 340 34.7
QL05p087372 Quercus lobata HOM05D004296 ORTHO05D005045 9.7e-35 151.8 343 37.0
Sopen08g029360 Solanum pennellii HOM05D004296 ORTHO05D005045 1.7e-34 151.0 395 43.0
MELO3C016352.2 Cucumis melo HOM05D004296 ORTHO05D005045 2.2e-34 150.6 348 33.6
Glyma.01G220000 Glycine max HOM05D004296 ORTHO05D005045 3.7e-34 149.8 344 34.3
MD07G1059600 Malus domestica HOM05D004296 ORTHO05D005045 6.3e-34 149.1 332 41.0
Potri.003G127200 Populus trichocarpa HOM05D004296 ORTHO05D005045 1.4e-33 147.9 344 48.5
CsaV3_4G005960 Cucumis sativus L. HOM05D004296 ORTHO05D005045 1.8e-33 147.5 346 32.7
Psat7g254600 Pisum sativum HOM05D004296 ORTHO05D005045 1.8e-33 147.5 175 43.4
PSO478G0046 Papaver somniferum HOM05D004296 ORTHO05D005045 2.6e-32 143.7 356 32.3
Phvul.002G157700 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 3.4e-32 143.3 347 32.6
Phvul.005G126900 Phaseolus vulgaris HOM05D004296 ORTHO05D005045 4.5e-32 142.9 341 31.4
Glyma.20G061500 Glycine max HOM05D004296 ORTHO05D005045 5.9e-32 142.5 335 33.1
Lalb_Chr20g0109121 Lupinus albus HOM05D004296 ORTHO05D005045 1.3e-31 141.4 329 30.1
PGR031G2604 Punica granatum HOM05D004296 ORTHO05D005045 1.3e-31 141.4 325 32.9
arahy.Tifrunner.gnm1.ann1.SKNY54 Arachis hypogaea HOM05D004296 ORTHO05D005045 1.7e-31 141.0 321 31.8
Psat1g061240 Pisum sativum HOM05D004296 ORTHO05D005045 1.7e-31 141.0 156 44.9
Medtr6g011320 Medicago truncatula HOM05D004296 ORTHO05D005045 2.2e-31 140.6 343 31.2
FAN07G0122 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.8e-31 139.8 195 43.6
VMungo1080G1277 Vigna mungo HOM05D004296 ORTHO05D005045 1.1e-30 138.3 343 34.4
Sed0022715 Sechium edule HOM05D004296 ORTHO05D005045 2.5e-30 137.1 377 30.8
FAN17G1800 Fragaria x ananassa HOM05D004296 ORTHO05D005045 3.2e-30 136.7 314 34.7
arahy.Tifrunner.gnm1.ann1.KQ253K Arachis hypogaea HOM05D004296 ORTHO05D005045 4.2e-30 136.3 314 32.5
LjContig00312_ERROPOS870357g0005117 Lotus japonicus HOM05D004296 ORTHO05D005045 4.2e-30 136.3 345 30.7
Hund17074 Selenicereus undatus HOM05D004296 ORTHO05D005045 4.2e-30 136.3 340 32.6
arahy.Tifrunner.gnm1.ann1.CEX2YD Arachis hypogaea HOM05D004296 ORTHO05D005045 5.5e-30 136.0 171 43.9
Cpa.g.sc39.99 Carica papaya HOM05D004296 ORTHO05D005045 5.5e-30 136.0 171 46.2
SHI24854 Sapria himalayana HOM05D004296 ORTHO05D005045 5.5e-30 136.0 206 40.3
ClCG07G008080 Citrullus lanatus HOM05D004296 ORTHO05D005045 7.2e-30 135.6 348 32.8
FAN12G1413 Fragaria x ananassa HOM05D004296 ORTHO05D005045 9.4e-30 135.2 312 35.9
PSO210G3801 Papaver somniferum HOM05D004296 ORTHO05D005045 9.4e-30 135.2 195 39.5
Aqoxy3G03757 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 1.2e-29 134.8 322 31.1
FvH4_4g36830 Fragaria vesca HOM05D004296 ORTHO05D005045 1.2e-29 134.8 310 35.5
CDE01G0178 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 2.3e-28 130.6 154 46.8
ECA240G3612 Erigeron canadensis HOM05D004296 ORTHO05D005045 5.1e-28 129.4 361 43.2
Rhsim02G0230400 Rhododendron simsii HOM05D004296 ORTHO05D005045 8.8e-28 128.6 329 33.7
TPR.G4254 Trifolium pratense HOM05D004296 ORTHO05D005045 1.1e-27 128.3 325 30.2
Lalb_Chr09g0320981 Lupinus albus HOM05D004296 ORTHO05D005045 7.4e-27 125.6 180 38.9
CDE04G2006 Ceratophyllum demersum HOM05D004296 ORTHO05D005045 3.7e-26 123.2 154 44.8
HPP92_021782 Vanilla planifolia HOM05D004296 ORTHO05D005045 6.3e-26 122.5 316 28.5
AUR62018749 Chenopodium quinoa HOM05D004296 ORTHO05D005045 8.2e-26 122.1 334 40.7
Aa31LG9G640 Aethionema arabicum HOM05D004296 ORTHO05D005045 1.1e-25 121.7 139 46.0
Os01g0541600 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 1.1e-25 121.7 151 41.7
Carub.0007s3425 Capsella rubella HOM05D004296 ORTHO05D005045 2.4e-25 120.6 307 32.2
BcaB06g27609 Brassica carinata HOM05D004296 ORTHO05D005045 2.6e-24 117.1 128 48.4
Haze_21601 Corylus avellana HOM05D004296 ORTHO05D005045 2.6e-24 117.1 247 45.7
CAN.G1069.19 Capsicum annuum HOM05D004296 ORTHO05D005045 5.9e-24 115.9 102 56.9
A04p14410 Brassica napus HOM05D004296 ORTHO05D005045 1.0e-23 115.2 127 47.2
BraA04t17088Z Brassica rapa HOM05D004296 ORTHO05D005045 1.0e-23 115.2 127 47.2
Aqoxy3G00118 Aquilegia oxysepala HOM05D004296 ORTHO05D005045 3.8e-23 113.2 315 29.5
BcaC02g08973 Brassica carinata HOM05D004296 ORTHO05D005045 5.0e-23 112.8 128 46.1
BolC4t26425H Brassica oleracea HOM05D004296 ORTHO05D005045 5.0e-23 112.8 128 46.1
FAN13G2230 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.5e-22 111.3 122 45.9
ATR0680G148 Amborella trichopoda HOM05D004296 ORTHO05D005045 2.5e-22 110.5 132 45.5
Psat0s5346g0040 Pisum sativum HOM05D002378 ORTHO05D002936 2.5e-22 110.5 258 30.2
THA.LOC104809392 Tarenaya hassleriana HOM05D004296 ORTHO05D005045 2.5e-22 110.5 309 29.4
AL7G48180 Arabidopsis lyrata HOM05D004296 ORTHO05D005045 3.2e-22 110.2 158 39.2
CARHR213060 Cardamine hirsuta HOM05D004296 ORTHO05D005045 3.2e-22 110.2 306 30.4
C04p48320 Brassica napus HOM05D004296 ORTHO05D005045 5.5e-22 109.4 311 29.6
SEGI_21744 Sequoiadendron giganteum HOM05D004296 ORTHO05D005045 9.4e-22 108.6 127 46.5
Carub.0001s0729 Capsella rubella HOM05D004296 ORTHO05D005045 4.7e-21 106.3 157 37.6
Zm00001eb162950 Zea mays HOM05D004296 ORTHO05D005045 4.7e-21 106.3 352 27.0
Sed0002821 Sechium edule HOM05D004296 ORTHO05D005045 1.0e-20 105.1 311 29.6
Rhsim02G0230900 Rhododendron simsii HOM05D004296 ORTHO05D005045 5.2e-20 102.8 232 34.9
PSO210G3847 Papaver somniferum HOM05D004296 ORTHO05D005045 6.7e-20 102.4 275 31.6
arahy.Tifrunner.gnm1.ann1.W3QJXS Arachis hypogaea HOM05D004296 ORTHO05D005045 8.8e-20 102.1 282 29.4
FAN18G3255 Fragaria x ananassa HOM05D004296 ORTHO05D005045 1.1e-19 101.7 91 47.3
Thhalv10028247m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 1.5e-19 101.3 299 29.8
AT5G41270 Arabidopsis thaliana HOM05D004296 ORTHO05D005045 2.6e-19 100.5 316 27.8
Sp7g00660 Schrenkiella parvula HOM05D004296 ORTHO05D005045 5.7e-19 99.4 313 30.4
SpUn0010_0140 Schrenkiella parvula HOM05D004296 ORTHO05D005045 5.7e-19 99.4 313 30.4
Sabra01G0078900 Salix brachista HOM05D004296 ORTHO05D005045 1.1e-17 95.1 249 55.0
Mapoly0057s0058 Marchantia polymorpha HOM05D004296 ORTHO05D005045 4.5e-16 89.7 112 44.6
PGSC0003DMG402005999 Solanum tuberosum HOM05D004296 ORTHO05D005045 1.3e-15 88.2 95 50.5
Nitab4.5_0003441g0080 Nicotiana tabacum HOM05D004296 ORTHO05D005045 2.9e-15 87.0 65 64.6
Thhalv10027895m.g Eutrema salsugineum HOM05D004296 ORTHO05D005045 9.4e-14 82.0 311 26.7
Os01g0531000 Oryza sativa ssp. japonica HOM05D004296 ORTHO05D005045 8.8e-12 75.5 99 39.4
AagrBONN_evm.TU.Sc2ySwM_228.2126 Anthoceros agrestis HOM05D004296 ORTHO05D005045 9.1e-09 65.5 101 35.6
Mapoly0057s0052 Marchantia polymorpha HOM05D004296 ORTHO05D005045 1.2e-08 65.1 79 43.0
Pp3c22_14200 Physcomitrium patens HOM05D004296 ORTHO05D005045 1.2e-08 65.1 110 35.5
ATR0680G137 Amborella trichopoda HOM05D004296 ORTHO05D005045 5.9e-08 62.8 53 54.7
Cpa.g.sc39.98 Carica papaya HOM05D004296 ORTHO05D005045 7.7e-08 62.4 76 46.1
Cfa014102 Carpinus fangiana HOM05D004296 ORTHO05D005045 2.2e-07 60.8 55 50.9
arahy.Tifrunner.gnm1.ann1.BHE6V7 Arachis hypogaea HOM05D004296 ORTHO05D005045 5.5e-06 56.2 66 42.4
FvH4_4g24221 Fragaria vesca HOM05D004296 ORTHO05D005045 5.5e-06 56.2 79 41.8


User provided reference genes

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