Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu020564.1 Olea europaea HOM05D003942 ORTHO05D004527 7.6e-50 200.3 108 100.0
Oeu020562.1 Olea europaea HOM05D003942 ORTHO05D004527 1.7e-33 146.0 77 98.7
Oeu020563.1 Olea europaea HOM05D003942 ORTHO05D004527 1.7e-33 146.0 77 98.7
TAR629G1832 Trochodendron aralioides HOM05D003942 ORTHO05D004527 7.9e-31 137.1 77 88.3
MSTRG.4859 Avicennia marina HOM05D003942 ORTHO05D004527 1.8e-30 136.0 77 90.9
Dinv32469 Davidia involucrata HOM05D003942 ORTHO05D004527 1.5e-29 132.9 77 87.0
Nn1g01512 Nelumbo nucifera HOM05D003942 ORTHO05D004527 1.9e-29 132.5 77 85.7
Nitab4.5_0008050g0040 Nicotiana tabacum HOM05D003942 ORTHO05D004527 1.9e-29 132.5 77 85.7
GSVIVG01026895001 Vitis vinifera HOM05D003942 ORTHO05D004527 2.5e-29 132.1 77 85.7
Cpa.g.sc18.243 Carica papaya HOM05D003942 ORTHO05D004527 9.7e-29 130.2 77 84.4
Peaxi162Scf00191g01422 Petunia axillaris HOM05D003942 ORTHO05D004527 9.7e-29 130.2 77 81.8
CANSAT56G2580 Cannabis sativa HOM05D003942 ORTHO05D004527 1.3e-28 129.8 77 81.8
Cc02_g37870 Coffea canephora HOM05D003942 ORTHO05D004527 1.3e-28 129.8 77 83.1
Sabra14G0060100 Salix brachista HOM05D003942 ORTHO05D004527 1.3e-28 129.8 77 85.7
Nitab4.5_0001702g0090 Nicotiana tabacum HOM05D003942 ORTHO05D004527 2.2e-28 129.0 77 83.1
COL.COLO4_12700 Corchorus olitorius HOM05D003942 ORTHO05D004527 4.8e-28 127.9 77 81.8
Duzib133G0298 Durio zibethinus HOM05D003942 ORTHO05D004527 4.8e-28 127.9 77 83.1
Potri.014G082900 Populus trichocarpa HOM05D003942 ORTHO05D004527 4.8e-28 127.9 77 81.8
Duzib138G1448 Durio zibethinus HOM05D003942 ORTHO05D004527 8.2e-28 127.1 77 81.8
unitig_8.g3394 Utricularia gibba HOM05D003942 ORTHO05D004527 8.2e-28 127.1 77 84.4
CiPaw.02G030000 Carya illinoinensis HOM05D003942 ORTHO05D004527 1.1e-27 126.7 77 79.2
Gohir.D11G092500 Gossypium hirsutum HOM05D003942 ORTHO05D004527 1.8e-27 125.9 77 80.5
Thecc.01G360500 Theobroma cacao HOM05D003942 ORTHO05D004527 1.8e-27 125.9 77 81.8
Atru.chr5.464 Acer truncatum HOM05D003942 ORTHO05D004527 2.4e-27 125.6 77 81.8
Aa31LG10G15570 Aethionema arabicum HOM05D003942 ORTHO05D004527 2.4e-27 125.6 77 83.1
Gohir.A11G088200 Gossypium hirsutum HOM05D003942 ORTHO05D004527 2.4e-27 125.6 77 79.2
Gorai.007G098800 Gossypium raimondii HOM05D003942 ORTHO05D004527 2.4e-27 125.6 77 79.2
CSS0041241 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 3.1e-27 125.2 77 80.5
CSS0049620 Camellia sinensis var. sinensis HOM05D003942 ORTHO05D004527 3.1e-27 125.2 77 80.5
AL5G43590 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 4.1e-27 124.8 77 83.1
AT3G61320 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 4.1e-27 124.8 77 83.1
Carub.0005s2799 Capsella rubella HOM05D003942 ORTHO05D004527 4.1e-27 124.8 77 83.1
Sp5g02060 Schrenkiella parvula HOM05D003942 ORTHO05D004527 6.9e-27 124.0 77 80.5
CAN.G399.13 Capsicum annuum HOM05D003942 ORTHO05D004527 9.1e-27 123.6 77 77.9
DCAR_015969 Daucus carota HOM05D003942 ORTHO05D004527 9.1e-27 123.6 77 80.5
Rhsim07G0016400 Rhododendron simsii HOM05D003942 ORTHO05D004527 9.1e-27 123.6 77 79.2
CiPaw.01G059900 Carya illinoinensis HOM05D003942 ORTHO05D004527 1.2e-26 123.2 77 80.5
A04p01160 Brassica napus HOM05D003942 ORTHO05D004527 1.5e-26 122.9 77 80.5
A09p53400 Brassica napus HOM05D003942 ORTHO05D004527 1.5e-26 122.9 77 79.2
BraA04t15833Z Brassica rapa HOM05D003942 ORTHO05D004527 1.5e-26 122.9 77 80.5
Ciclev10020374m.g Citrus clementina HOM05D003942 ORTHO05D004527 1.5e-26 122.9 77 81.8
Prupe.2G168100 Prunus persica HOM05D003942 ORTHO05D004527 1.5e-26 122.9 76 80.3
RcHm_v2.0_Chr1g0355071 Rosa chinensis HOM05D003942 ORTHO05D004527 1.5e-26 122.9 76 80.3
PGSC0003DMG400021644 Solanum tuberosum HOM05D003942 ORTHO05D004527 1.5e-26 122.9 77 79.2
BcaC02g10219 Brassica carinata HOM05D003942 ORTHO05D004527 2.0e-26 122.5 77 80.5
BcaC07g40631 Brassica carinata HOM05D003942 ORTHO05D004527 2.0e-26 122.5 77 80.5
C04p31390 Brassica napus HOM05D003942 ORTHO05D004527 2.0e-26 122.5 77 80.5
BolC4t24688H Brassica oleracea HOM05D003942 ORTHO05D004527 2.0e-26 122.5 77 80.5
SalBow5G2271 Salvia bowleyana HOM05D003942 ORTHO05D004527 2.0e-26 122.5 77 83.1
TAR375G0209 Trochodendron aralioides HOM05D003942 ORTHO05D004527 2.0e-26 122.5 77 77.9
CARHR171630 Cardamine hirsuta HOM05D003942 ORTHO05D004527 2.6e-26 122.1 77 79.2
Thhalv10006010m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 2.6e-26 122.1 77 79.2
Solyc05g049900.3 Solanum lycopersicum HOM05D003942 ORTHO05D004527 2.6e-26 122.1 77 77.9
Sopen05g028240 Solanum pennellii HOM05D003942 ORTHO05D004527 2.6e-26 122.1 77 77.9
HanXRQChr16g0522811 Helianthus annuus HOM05D003942 ORTHO05D004527 3.4e-26 121.7 77 81.8
QL08p049021 Quercus lobata HOM05D003942 ORTHO05D004527 3.4e-26 121.7 77 77.9
Cfa003938 Carpinus fangiana HOM05D003942 ORTHO05D004527 4.5e-26 121.3 77 80.5
Lj9A582T85 Lonicera japonica HOM05D003942 ORTHO05D004527 5.9e-26 120.9 77 77.9
Lsat_1_v5_gn_4_36221 Lactuca sativa HOM05D003942 ORTHO05D004527 7.7e-26 120.6 77 81.8
FAN03G2475 Fragaria x ananassa HOM05D003942 ORTHO05D004527 1.0e-25 120.2 76 78.9
Actinidia10022 Actinidia chinensis HOM05D003942 ORTHO05D004527 1.3e-25 119.8 77 76.6
Aa31LG1G27300 Aethionema arabicum HOM05D003942 ORTHO05D004527 1.3e-25 119.8 79 74.7
TWI23G1005 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 1.7e-25 119.4 77 75.3
C08p36210 Brassica napus HOM05D003942 ORTHO05D004527 2.2e-25 119.0 77 77.9
BolC8t51203H Brassica oleracea HOM05D003942 ORTHO05D004527 2.2e-25 119.0 77 77.9
BraA09t40766Z Brassica rapa HOM05D003942 ORTHO05D004527 2.2e-25 119.0 77 77.9
FvH4_7g14170 Fragaria vesca HOM05D003942 ORTHO05D004527 2.2e-25 119.0 76 77.6
FAN01G0250 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.2e-25 119.0 76 77.6
FAN06G2309 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.2e-25 119.0 76 77.6
FAN06G3470 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.2e-25 119.0 76 77.6
FAN10G2852 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.2e-25 119.0 76 77.6
FAN10G4090 Fragaria x ananassa HOM05D003942 ORTHO05D004527 2.2e-25 119.0 76 77.6
MD01G1057600 Malus domestica HOM05D003942 ORTHO05D004527 2.2e-25 119.0 77 77.9
CDE09G0298 Ceratophyllum demersum HOM05D003942 ORTHO05D004527 2.9e-25 118.6 77 72.7
PGR042G2566 Punica granatum HOM05D003942 ORTHO05D004527 2.9e-25 118.6 77 77.9
SGA_v2.0_scaffold43G16422 Striga asiatica HOM05D003942 ORTHO05D004527 2.9e-25 118.6 77 79.2
CARHR141140 Cardamine hirsuta HOM05D003942 ORTHO05D004527 3.8e-25 118.2 77 76.6
Migut.N01440 Erythranthe guttata HOM05D003942 ORTHO05D004527 3.8e-25 118.2 77 75.3
Eucgr.E00157 Eucalyptus grandis HOM05D003942 ORTHO05D004527 5.0e-25 117.9 77 75.3
Thhalv10001467m.g Eutrema salsugineum HOM05D003942 ORTHO05D004527 6.5e-25 117.5 77 76.6
Manes.05G036000 Manihot esculenta HOM05D003942 ORTHO05D004527 6.5e-25 117.5 77 77.9
THA.LOC104817290 Tarenaya hassleriana HOM05D003942 ORTHO05D004527 8.5e-25 117.1 77 75.3
MD07G1139000 Malus domestica HOM05D003942 ORTHO05D004527 1.1e-24 116.7 77 77.9
AT2G45870 Arabidopsis thaliana HOM05D003942 ORTHO05D004527 1.4e-24 116.3 77 75.3
Haze_15488 Corylus avellana HOM05D003942 ORTHO05D004527 1.4e-24 116.3 77 76.6
Lsat_1_v5_gn_3_137060 Lactuca sativa HOM05D003942 ORTHO05D004527 1.9e-24 115.9 77 76.6
Lalb_Chr03g0038211 Lupinus albus HOM05D003942 ORTHO05D004527 1.9e-24 115.9 74 75.7
Sc23g0002980 Simmondsia chinensis HOM05D003942 ORTHO05D004527 2.5e-24 115.5 77 79.2
Carub.0004s2857 Capsella rubella HOM05D003942 ORTHO05D004527 3.2e-24 115.2 77 75.3
HanXRQChr13g0426521 Helianthus annuus HOM05D003942 ORTHO05D004527 3.2e-24 115.2 77 76.6
MBI18_g25515_MAGBIO Magnolia biondii HOM05D003942 ORTHO05D004527 3.2e-24 115.2 77 74.0
AL4G45080 Arabidopsis lyrata HOM05D003942 ORTHO05D004527 4.2e-24 114.8 77 75.3
AUR62004344 Chenopodium quinoa HOM05D003942 ORTHO05D004527 5.5e-24 114.4 77 71.4
ATR0680G085 Amborella trichopoda HOM05D003942 ORTHO05D004527 9.4e-24 113.6 77 68.8
Hund27285 Selenicereus undatus HOM05D003942 ORTHO05D004527 1.2e-23 113.2 77 72.7
TWI59G0555 Tripterygium wilfordii HOM05D003942 ORTHO05D004527 1.6e-23 112.8 77 71.4
C04p71910 Brassica napus HOM05D003942 ORTHO05D004527 2.1e-23 112.5 77 75.3
BolC4t28689H Brassica oleracea HOM05D003942 ORTHO05D004527 2.1e-23 112.5 77 75.3
Sp4g27940 Schrenkiella parvula HOM05D003942 ORTHO05D004527 2.1e-23 112.5 77 72.7
ECA240G2096 Erigeron canadensis HOM05D003942 ORTHO05D004527 2.7e-23 112.1 77 74.0
C05p09980 Brassica napus HOM05D003942 ORTHO05D004527 6.1e-23 110.9 77 74.0
Aqoxy5G04009 Aquilegia oxysepala HOM05D003942 ORTHO05D004527 7.9e-23 110.5 78 73.1
arahy.Tifrunner.gnm1.ann1.2H0UDK Arachis hypogaea HOM05D003942 ORTHO05D004527 7.9e-23 110.5 78 71.8
arahy.Tifrunner.gnm1.ann1.Q5YAPI Arachis hypogaea HOM05D003942 ORTHO05D004527 7.9e-23 110.5 78 71.8
Medtr8g031000 Medicago truncatula HOM05D003942 ORTHO05D004527 7.9e-23 110.5 77 71.4
A04p34110 Brassica napus HOM05D003942 ORTHO05D004527 1.0e-22 110.2 77 74.0
BraA04t18872Z Brassica rapa HOM05D003942 ORTHO05D004527 1.0e-22 110.2 77 74.0
AUR62022550 Chenopodium quinoa HOM05D003942 ORTHO05D004527 1.0e-22 110.2 77 68.8
Ca_23643_v3 Cicer arietinum L. HOM05D003942 ORTHO05D004527 1.8e-22 109.4 77 70.1
Ah.05g180690 Amaranthus hybridus HOM05D003942 ORTHO05D004527 2.3e-22 109.0 77 68.8
TPR.G15979 Trifolium pratense HOM05D003942 ORTHO05D004527 3.0e-22 108.6 77 70.1
Psat4g154400 Pisum sativum HOM05D003942 ORTHO05D004527 5.1e-22 107.8 77 68.8
Lalb_Chr04g0256871 Lupinus albus HOM05D003942 ORTHO05D004527 2.0e-21 105.9 77 70.1
Glyma.07G071900 Glycine max HOM05D003942 ORTHO05D004527 2.6e-21 105.5 77 68.8
BcaC02g07065 Brassica carinata HOM05D003942 ORTHO05D004527 3.3e-21 105.1 78 73.1
Phvul.010G097300 Phaseolus vulgaris HOM05D003942 ORTHO05D004527 4.4e-21 104.8 77 70.1
Glyma.03G010800 Glycine max HOM05D003942 ORTHO05D004527 7.4e-21 104.0 77 67.5
Lj3g0006137 Lotus japonicus HOM05D003942 ORTHO05D004527 1.3e-20 103.2 77 68.8
VMungo0331G0006 Vigna mungo HOM05D003942 ORTHO05D004527 4.8e-20 101.3 77 68.8
HPP92_006558 Vanilla planifolia HOM05D003942 ORTHO05D004527 5.3e-19 97.8 73 68.5
HPP92_011355 Vanilla planifolia HOM05D003942 ORTHO05D004527 5.3e-19 97.8 73 68.5
vmacro13277 Vaccinium macrocarpon HOM05D003942 ORTHO05D004527 9.1e-19 97.1 63 76.2
BcaC09g52244 Brassica carinata HOM05D003942 ORTHO05D004527 2.6e-18 95.5 77 67.5
SEGI_25793 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 5.9e-18 94.4 79 60.8
Pp3c4_15850 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.6e-15 86.3 76 55.3
Mapoly0071s0037 Marchantia polymorpha HOM05D003942 ORTHO05D004527 4.7e-15 84.7 77 57.1
MD01G1202300 Malus domestica HOM05D003942 ORTHO05D004527 6.1e-15 84.3 60 70.0
SMO364G0338 Selaginella moellendorffii HOM05D003942 ORTHO05D004527 8.0e-15 84.0 79 49.4
SEGI_34263 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.4e-14 83.2 77 54.5
SEGI_35716 Sequoiadendron giganteum HOM05D003942 ORTHO05D004527 1.4e-14 83.2 77 54.5
Pp3c2_13700 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.5e-13 79.7 77 50.6
Pp3c3_22870 Physcomitrium patens HOM05D003942 ORTHO05D004527 2.0e-13 79.3 76 52.6
CBR_g38187 Chara braunii HOM05D003942 ORTHO05D004527 7.4e-13 77.4 79 51.9
FAN10G0144 Fragaria x ananassa HOM05D003942 ORTHO05D004527 7.4e-13 77.4 49 79.6
Zm00001eb000510 Zea mays HOM05D003942 ORTHO05D004527 1.3e-12 76.6 79 58.2
Os03g0106000 Oryza sativa ssp. japonica HOM05D003942 ORTHO05D004527 2.8e-12 75.5 77 59.7
AagrBONN_evm.TU.Sc2ySwM_362.1957 Anthoceros agrestis HOM05D003942 ORTHO05D004527 1.1e-11 73.6 76 53.9
AagrBONN_evm.TU.Sc2ySwM_228.958 Anthoceros agrestis HOM05D003942 ORTHO05D004527 3.1e-11 72.0 73 50.7
Mapoly0009s0131 Marchantia polymorpha HOM05D003942 ORTHO05D004527 3.1e-11 72.0 74 44.6
AagrBONN_evm.TU.Sc2ySwM_344.3805 Anthoceros agrestis HOM05D003942 ORTHO05D004527 1.2e-10 70.1 77 46.8
CBR_g44610 Chara braunii HOM05D000505 ORTHO05D000301 3.5e-10 68.6 74 45.9
Pp3c1_3670 Physcomitrium patens HOM05D003942 ORTHO05D004527 6.5e-09 64.3 94 40.4
EL10Ac1g00428 Beta vulgaris HOM05D003942 ORTHO05D004527 2.5e-08 62.4 49 63.3
Pp3c20_3390 Physcomitrium patens HOM05D003942 ORTHO05D004527 5.5e-08 61.2 84 40.5
Pp3c6_24250 Physcomitrium patens HOM05D003942 ORTHO05D004527 9.4e-08 60.5 94 37.2
Pp3c1_34560 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.6e-07 58.5 74 43.2
Pp3c11_9440 Physcomitrium patens HOM05D003942 ORTHO05D004527 1.0e-06 57.0 94 36.2
CBR_g772 Chara braunii HOM05D003942 ORTHO05D004527 2.3e-06 55.8 75 38.7
Pp3c1_34600 Physcomitrium patens HOM05D003942 ORTHO05D004527 3.0e-06 55.5 94 31.9


User provided reference genes

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